- Transcript 'KH2012:KH.C1.693.v2....'
Transcript Model
Transcript Id
KH2012:KH.C1.693.v2.R.ND2-1
Possible name(s)
ZFAND4; ZFAND5; ZFAND6
Gene model
Location
KhC1 [7,387,816 / 7,402,842]
Amino acid sequence
Length: 753
>KH.C1.693.v2.R.ND2-1
SSCSLLVFQNSRMNDKEFFDEGGNIHSSYRLSYNVMELFIETLTGTCFELRVSPYETVIA
VKAKIQRLEGIPVSQQFLIWKNVELEDECCLRDYNITDGCTLKLVLAMRGGPINTRRVIS
MEESRDLPDPLDNPEDLFDKPTTPHSGGNGTKQVTLLVYRDGDQLNFFRVVDRGDGTLTP
FSESLSGSACNLHEEEEEEIALPSSKPPALSVAQMVENNITASKMKQLRTNMENLMIAPQ
PNKVTSVMKPKPPSMPRKLDGTTMKRYSQQPKPLKFKPPTPAAHAEPQNKNRTSEMMRSL
SNEDAPATVSEPRHSRLRCFRNVTDTNNDLVTSEKKVSEDIKETNQATANTQDATEGSGR
FSPRTRRLLNALESDSYQRRSYLMPRPRQLSGMTYNRHDMYLRSYGLLPSPDQLPPMPTN
HEPSSPRNQEEVDMATKVFETNQGVKYSTLDGYPIPPYWAGGGNGVLKSPIWEQGQPVAD
GCKSGKTVAGKLGTTQRSSAEGGAFGFTIPESPIRKLEDQGARSKLSKSALRSRRFTPEP
PKTMEQKPSRHRKLVRGQNVSGLPPTTRSDEPTTPLRQSYKKNNIIKESHARVETMSKQE
AREVVDFINKAVDANVLRNLVRSPTKDNQRGSSGQSGHRLPSSNIHYTDKRQPMKSPHGS
AYMRLAPSCTSPTAVRPPSILPPVKHTSKKKRCFLCGKRTGLATSYTCRCGNNFCASHRY
AEAHDCTYDYKTAGRKILKEANPLVSAPKLPKI
Nucleotide sequence
Length: 2,535
>KH2012:KH.C1.693.v2.R.ND2-1
GATTTGTTTTGTTTGTTTGGAGAAGAAGAATTAGATTCCCGATCAGTGTTGACTGTTTTA
TCTGTATTGTCCAGCTATGTTCGCATGCTGAGAAATAATCATCATGTTCCTTGCTGGTGT
TCCAAAATAGCAGGATGAATGATAAAGAATTTTTCGACGAAGGGGGAAATATTCACAGTA
GTTACAGACTTTCGTACAATGTGATGGAATTATTCATTGAAACATTGACGGGGACTTGCT
TCGAATTGCGAGTCTCACCATACGAAACAGTCATCGCTGTAAAAGCTAAAATTCAACGCC
TGGAAGGAATTCCTGTCTCCCAACAGTTTCTCATTTGGAAAAACGTAGAATTAGAAGATG
AATGTTGCTTAAGAGATTACAACATTACTGATGGTTGCACTTTAAAGTTGGTTCTTGCGA
TGAGAGGCGGTCCAATTAACACACGGAGAGTCATCTCAATGGAAGAGTCACGTGACCTTC
CCGACCCTCTGGATAACCCCGAGGATTTATTCGATAAACCAACGACACCACATAGTGGTG
GAAATGGCACAAAACAGGTGACACTTCTTGTCTACCGAGATGGTGATCAGCTGAATTTCT
TCCGCGTGGTGGATCGTGGTGATGGGACTTTAACTCCATTCTCTGAATCTCTAAGCGGAT
CAGCCTGCAACCTCCATGAAGAGGAAGAAGAGGAGATCGCTCTTCCCTCATCTAAACCTC
CAGCTTTAAGTGTGGCGCAGATGGTGGAGAACAACATCACCGCTTCCAAGATGAAACAAC
TTCGAACAAACATGGAAAACCTCATGATCGCTCCACAACCAAATAAGGTAACATCAGTGA
TGAAACCAAAACCACCTTCAATGCCAAGAAAACTTGATGGAACAACAATGAAAAGATATT
CTCAGCAGCCAAAACCCCTTAAATTCAAACCCCCAACCCCAGCCGCTCATGCGGAACCAC
AAAACAAAAACCGAACATCAGAAATGATGAGGTCACTCAGTAATGAAGATGCACCAGCCA
CCGTTAGCGAACCACGTCATTCTAGATTACGTTGCTTTCGTAACGTAACAGACACAAATA
ATGATTTGGTAACTTCTGAGAAAAAAGTTTCTGAAGATATAAAAGAAACAAACCAAGCAA
CTGCTAATACACAGGATGCAACTGAGGGCAGTGGCCGTTTTAGTCCAAGGACGCGTCGGT
TGTTGAATGCTTTGGAATCCGATTCTTATCAACGGCGTTCCTACTTAATGCCAAGACCCC
GCCAGTTATCAGGCATGACGTACAACAGACACGACATGTACTTGCGTTCATATGGACTTC
TACCCTCACCAGATCAATTACCTCCAATGCCCACCAACCATGAACCCTCGTCTCCAAGGA
ATCAAGAGGAAGTTGACATGGCTACAAAAGTTTTTGAGACTAACCAAGGTGTGAAGTATA
GCACCCTTGATGGTTACCCTATCCCCCCGTACTGGGCAGGGGGCGGCAACGGGGTCCTAA
AAAGCCCCATTTGGGAGCAGGGCCAGCCTGTTGCAGATGGTTGCAAGAGTGGAAAAACTG
TTGCGGGAAAATTAGGAACGACTCAAAGATCTTCCGCGGAGGGTGGTGCGTTTGGTTTCA
CCATTCCTGAGAGTCCGATCCGGAAGTTGGAAGATCAAGGAGCAAGGTCCAAGTTATCAA
AATCTGCTCTTCGGAGTCGTAGATTTACTCCTGAACCTCCGAAGACGATGGAACAGAAAC
CAAGCCGACATCGAAAGTTGGTGAGAGGACAAAACGTGTCTGGTTTACCACCAACCACAC
GTAGTGATGAACCTACGACTCCTTTAAGGCAATCCTATAAGAAAAATAACATCATTAAGG
AGTCTCATGCGCGTGTCGAGACGATGTCTAAGCAAGAAGCACGAGAAGTGGTTGATTTCA
TCAACAAAGCAGTTGATGCCAACGTGCTTCGGAATCTTGTAAGAAGTCCAACTAAGGACA
ACCAGAGAGGCAGCAGCGGACAGAGTGGCCATAGGTTACCCAGTTCCAATATACATTACA
CAGACAAACGTCAACCTATGAAGTCTCCACATGGTAGTGCTTACATGAGACTTGCCCCTT
CATGCACTTCCCCCACTGCTGTGCGACCACCATCAATATTACCCCCTGTAAAACATACTA
GCAAGAAGAAAAGGTGCTTTTTGTGTGGAAAGCGTACTGGTTTAGCAACCAGTTATACGT
GCAGATGTGGGAACAATTTCTGTGCCAGTCACAGATATGCAGAAGCACATGATTGCACAT
ATGATTATAAAACTGCTGGTCGTAAAATCCTTAAAGAAGCCAACCCCTTGGTCAGCGCGC
CAAAGTTACCCAAAATCTAAGCCCGAAAAGTTTCAAAAATTATGTAAAACTCCTGACAGT
GTTTATAAGCGCAACTGCCAAATTGCTTGGCTGCTTTTACACACAGTTGGTTTTTATATG
AGGTAAAATTATGTTTGGTGTGATGTTTCATTTTATTGCAACACTGTGATTTAGAATACA
AAAACATGCTATTGA
| SUPERFAMILY |
Ubiquitin-like_domsf (IPR029071) - T[18-112] 3.38E-25 |
| SMART |
Ubiquitin_dom (IPR000626) - T[36-107] 3.6E-19 |
| ProSiteProfiles |
Ubiquitin_dom (IPR000626) - T[36-111] 20.37 |
| Pfam |
Ubiquitin_dom (IPR000626) - T[38-109] 1.2E-19 |
| PRINTS |
Ubiquitin (IPR019956) - T[46-66] 8.0E-9 - T[67-87] 8.0E-9 - T[88-109] 8.0E-9 |
| Gene3D |
AN1-like_Znf (IPR035896) - T[668-748] 8.6E-28 |
| SUPERFAMILY |
AN1-like_Znf (IPR035896) - T[682-748] 1.57E-27 |
| ProSiteProfiles |
Znf_AN1 (IPR000058) - T[690-734] 12.05 |
| SMART |
Znf_AN1 (IPR000058) - T[693-731] 2.5E-15 |
| Pfam |
Znf_AN1 (IPR000058) - T[693-731] 5.9E-9 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZFAN4_HUMAN | 49.248 % | 216 | 2.47E-60 |
| ZFAN6_HUMAN | 46.154 % | 77.8 | 3.8E-16 |
| ZFAN5_HUMAN | 49.231 % | 77.8 | 3.93E-16 |