- Region 'REG00000550' >
- Transcript 'Moocci.CG.ELv1_2.S59...' >
- Molecular Tool 'Cirobu.Bra>MRFbΔCH (Izzi 2013)' >
- Transcript 'KH2012:KH.L154.4.v1....' >
- Transcript 'KH2012:KH.C1.683.v1....'
Transcript Model
Transcript Id
KH2012:KH.C1.683.v1.R.ND1-1
Possible name(s)
P4HA1; P4HA2; P4HA3
Gene model
Location
KhC1 [9,759,719 / 9,775,876]
Amino acid sequence
Length: 445
>KH.C1.683.v1.R.ND1-1
IAERFQHISENARSNMDKYLGHPVNQYRLVRRLATEWADMEDIVNENVAEVFLTNLTQKQ
SHFPGEEDVKGTAEAIMRLQDTYRLDTHDVARGIIKGLQSNQSLTADDCFHIGRTAYLER
DFYHCRLWMNEVLNHQENGLTYSRFDVLDHLSYCTAQGGNIQKAYEITKEMLQIDPSLDR
IRGNHEHYRQLLGERKRGDDGDVEEFQQSKQQAEYPSTPERVDYERLCRGEGIHIXELWH
SPHLVRFHGIMSDKEMAMIKSLAKPRLRRATVQNPVTGVLEFAHYRVSKSAWLKDEDHPV
IKRVCQRISDVTGLSMETAEELQIANYGVGGQYEPHFDYSRKSDFGKFDDEVGNRIATFL
TYMSNVEQGGSTVFLHPGIAVRPIKGSAVFWYNLLPSGAGDERTRHAACPVLTGVKWVSN
KWIHERDQEFRRSCKTNIKADNRIF
Nucleotide sequence
Length: 2,193
>KH2012:KH.C1.683.v1.R.ND1-1
AATAGCGGAAAGGTTTCAACATATATCGGAAAATGCGAGAAGTAACATGGATAAATATCT
CGGACATCCTGTCAATCAATATCGACTCGTTAGAAGGTTGGCCACCGAGTGGGCAGATAT
GGAGGATATTGTTAACGAAAATGTTGCCGAAGTGTTTCTTACCAACTTAACACAGAAACA
ATCACATTTTCCTGGTGAGGAAGATGTTAAAGGAACAGCTGAAGCAATCATGAGGTTACA
AGACACGTATCGTCTCGATACACATGATGTTGCACGTGGTATAATAAAAGGTTTGCAGTC
GAACCAATCCCTCACAGCAGACGATTGTTTCCACATCGGTCGAACTGCTTATCTTGAAAG
AGATTTCTACCATTGTAGGTTATGGATGAATGAAGTTCTCAACCATCAAGAAAATGGATT
GACTTATTCAAGATTTGATGTCTTGGACCATTTGTCATACTGTACAGCTCAAGGCGGTAA
CATACAGAAGGCTTATGAGATAACAAAAGAAATGCTCCAGATTGATCCATCATTGGATAG
AATACGAGGCAACCATGAACATTACAGGCAACTCCTTGGTGAGCGTAAACGAGGAGACGA
TGGAGATGTTGAAGAATTTCAACAATCCAAGCAACAAGCTGAATATCCATCAACACCTGA
GAGAGTGGATTATGAGAGGTTGTGTAGAGGGGAGGGAATTCATATTNAAGAGTTATGGCA
TTCACCCCACCTTGTGAGGTTCCATGGTATTATGAGTGACAAGGAGATGGCTATGATCAA
ATCACTTGCTAAACCAAGATTACGCAGAGCCACAGTCCAGAACCCCGTGACTGGTGTGTT
AGAGTTCGCTCATTATCGAGTTAGTAAAAGTGCTTGGTTGAAAGATGAAGACCACCCTGT
TATAAAGAGAGTATGTCAACGCATATCTGATGTCACTGGCTTGTCCATGGAGACTGCAGA
AGAGTTACAAATTGCCAACTATGGAGTGGGTGGGCAATATGAACCTCATTTTGATTATTC
AAGGAAATCCGATTTTGGGAAATTTGACGATGAAGTTGGAAACCGTATTGCTACTTTCCT
GACTTATATGAGTAATGTAGAGCAAGGGGGAAGCACGGTGTTCCTACACCCTGGGATCGC
TGTTCGACCAATAAAAGGATCCGCCGTGTTCTGGTACAATCTACTGCCCTCTGGTGCTGG
AGATGAACGAACACGACACGCAGCGTGCCCCGTGCTTACTGGGGTCAAGTGGGTGAGCAA
CAAATGGATCCATGAGCGCGATCAGGAATTCCGAAGATCTTGCAAAACAAACATCAAAGC
TGACAACAGAATCTTTTAATTGATTCCCATAAAAACTTATGTTTTAATGACCGGGGTACT
GACACTGAATTCACACAAAGGTAAAAATGTTTTCACCCCACTATGGGTACTGCAGTAAAA
ATTGACAGATTTAATCTGAAACACAAATTGTGTTTTATACCTTTTTCTATCCTGCCCATT
TCTGTATTAAAGCTAAAATGAACTTGTTTTGCTAAATATGATATCGTGCTTTTTCAGTTT
TTTCTATGCTTGTGGTATGTTAGCTTATGACCTCGGGTGTATCCAGGTCTGGACCACATT
TTCATAAATTAGGCATCAAGTACTCATAAAAAAAATGGTATAAAATAACTATAAATATAA
GTCATAAAATAAATTTAAAAAAAACGTTTGAAAGTAGAGTTAACCCCCTGGTAAATTCCT
GGATACACCCCTGCTTATGGTTACAGTTTTTCATATATTTTGTGCCATCATCAACTTTGC
GCAGCTAATCAGTATTAAGCAGTTCTTTTCAAGTTAATGATCATATGATATTCGGTTATA
TTCACCACATACATGCAATACAGTTAATAATAAAAATGCAGCTTTTTCTTTTATTTTTAA
CAACTTTTTAAATAAGACACTGGCCATGTCATCAATACAACTCGTGGGACTTGATTTTGA
TGCTTAGTATTCTCATAGCCCTTGATCCTGACCATTATTCGGTTACAAAAACTCATGGGA
TTTATCACAGTTATTTCCAGCAATTTACATTTATTCCATTAAAATCATGAATATAAGTAT
AAAAAAATTAAAATTACAGATATTGAAGAGTAAAAATCGCCTATTTATTGCACCTTGATT
ACAACTAATCAACTTTATAAAAATTGCCAGCAC
| Pfam |
Pro_4_hyd_alph_N (IPR013547) - T[2-97] 4.6E-27 |
| Gene3D |
TPR-like_helical_dom_sf (IPR011990) - T[66-193] 2.1E-38 |
| SUPERFAMILY |
TPR-like_helical_dom_sf (IPR011990) - T[105-193] 1.36E-8 |
| SMART |
Pro_4_hyd_alph (IPR006620) - T[242-424] 5.6E-65 |
| ProSiteProfiles |
Oxoglu/Fe-dep_dioxygenase (IPR005123) - T[318-425] 12.8 |
| Pfam |
Oxoglu/Fe-dep_dioxygenase (IPR005123) - T[322-424] 5.0E-16 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| P4HA1_HUMAN | 46.055 % | 433 | 1.42E-148 |
| P4HA2_HUMAN | 46.921 % | 441 | 6.33E-152 |
| P4HA3_HUMAN | 33.761 % | 265 | 2.71E-83 |