Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C1.644.v1.A.ND1-1

Possible name(s)

SHQ1

Gene model

KH2012:KH.C1.644

Location

KhC1 [6,432,109 / 6,434,773]

Sequences

Amino acid sequence

Length: 431

>KH.C1.644.v1.A.ND1-1
AMLTPKFQINQDDVSVTIVVHAPYTKVSEVDIFIEETCFAFHAKPYYLRLELPGTIVEAG
SSCKYEVDKGAYTVHVCKQEKGEHFENLDLLTTMLAQKKTPQTKPLIEVVEEDVNCEHEA
SLTKENICSTTFGYGFANQKHGVISKLQEDLCDIVYIRNPDDTSLEDRKSLKQAAEDLKF
DSDYYLADLYEDDYIQHIIKFIPEWKQSPEEQLEFTDEEKEQLQKLPNKEYLISENEQQI
ILNGLFDILFAYAYNVRVTEGEGCVESAWNIRTISHTLSWCCSSSCLKETVVSCLRRSLC
YPQYRNWKLGCKVVQDVIRILKKGRRYILHCLLHIWRIFQTADGSPCYILNDLYITDYCV
WLQKLKTCDELMKSLSKEAKGLNVLKKDLDLELELIEEAAELVLADEKQAEESNSEVDEL
TNQIGLVSVDS

Nucleotide sequence

Length: 1,521

>KH2012:KH.C1.644.v1.A.ND1-1
GTGGATTATTGTGAGCGATGTTGACGCCCAAATTTCAAATTAACCAAGACGACGTTTCCG
TTACAATAGTCGTACATGCCCCATATACCAAAGTGTCGGAAGTCGATATTTTCATTGAAG
AGACTTGCTTTGCTTTCCATGCAAAACCATATTACCTTCGATTAGAACTTCCTGGCACCA
TTGTGGAAGCTGGTTCATCGTGCAAATACGAGGTTGATAAAGGTGCTTATACTGTCCATG
TGTGTAAACAAGAAAAGGGCGAACACTTTGAAAACCTTGATTTACTAACAACGATGTTGG
CACAGAAGAAAACACCACAAACTAAACCCCTGATTGAAGTTGTGGAAGAAGATGTTAATT
GTGAACATGAAGCAAGTTTAACTAAAGAAAATATTTGTTCAACCACATTCGGTTACGGCT
TTGCAAATCAAAAACACGGCGTCATATCTAAGTTACAGGAAGATTTGTGTGATATTGTTT
ACATTAGAAATCCGGATGATACCAGTTTGGAAGATCGTAAAAGTTTAAAACAAGCTGCTG
AAGATTTGAAGTTTGATTCTGATTACTATCTAGCGGACCTGTATGAAGATGATTACATTC
AGCACATCATCAAATTTATCCCAGAGTGGAAACAAAGTCCGGAGGAACAATTGGAGTTTA
CTGATGAGGAGAAAGAGCAACTTCAGAAACTTCCAAATAAAGAATACCTCATTTCAGAAA
ACGAACAACAAATAATTTTGAATGGTTTGTTTGATATTTTATTCGCATATGCTTACAATG
TGCGAGTAACTGAGGGCGAGGGGTGTGTGGAGTCTGCATGGAACATAAGAACCATCAGTC
ATACCTTGTCATGGTGCTGCTCATCTTCCTGCTTGAAGGAGACAGTGGTTTCTTGTTTAA
GAAGATCCCTATGTTATCCACAATACAGAAATTGGAAGTTAGGATGCAAAGTTGTTCAAG
ATGTTATTCGAATATTAAAGAAAGGAAGACGCTACATCCTGCACTGTCTCTTGCATATTT
GGAGAATATTTCAAACTGCTGATGGATCTCCTTGCTACATATTAAATGACCTTTACATAA
CTGACTACTGTGTGTGGCTGCAAAAGTTAAAAACCTGCGATGAACTGATGAAAAGTCTTT
CCAAGGAAGCTAAAGGTCTAAACGTTTTAAAAAAAGACTTGGACCTTGAACTGGAACTGA
TTGAAGAAGCAGCAGAACTTGTTTTAGCTGATGAGAAGCAAGCCGAAGAAAGCAACAGTG
AGGTTGATGAACTGACAAACCAGATAGGCTTAGTTTCTGTGGATTCTTAATGTAAAGTTG
GGATGTTAATCATGCATATCAACATATGTCAAATTTTCATTATGATTATTCCTGCAATTC
AAATTTTCATTATGATTATTCCTGCAATGTCCATATTTTCATTATGATGAGCAAAAATGA
AGGACAACTTCTAAAAAACATATATGTATATTAAACTTCTTTAACAGTGAATATATATTA
CATGAACTTTTAACCTAACAC

InterProScan

Gene3D	HSP20-like_chaperone (IPR008978) - T[2-128] 2.9E-34
ProSiteProfiles	CS_dom (IPR007052) - T[2-89] 12.19
SUPERFAMILY	HSP20-like_chaperone (IPR008978) - T[4-87] 5.06E-8
Pfam	SHQ1 (IPR007009) - T[211-387] 6.8E-67

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
SHQ1_HUMAN	43.577 %	324	1.03E-105