- Transcript 'KH2012:KH.C1.596.v1....'
Transcript Model
Transcript Id
KH2012:KH.C1.596.v1.A.nonSL5-1
Possible name(s)
RDH11; RDH13; RDH14
Gene model
Location
KhC1 [923,341 / 926,376]
Amino acid sequence
Length: 316
>KH.C1.596.v1.A.nonSL5-1
IGSTENMEKSARGNWVISDVKMTGKTVVITGANTGIGLETAIDLVKREARVILGCRNMAK
AEEAKQRIITETGGNEDKIILKQLDLASFASVRAFAKDVNENESRIDVLLNNAGIMLIPK
GKTEDGFELHYGVNHLGHFLLTNLLLDLVKKSAPSRIINVSSEAHRLGSPRIDWDDMNYD
NNYSASLAYNRSKLMNILFTRELSRRLEGTKVTANSLHPGVVRTELSRHMFDSNISMWRT
AVKWIVDPLVYLFGKTPVHGAQTNIYLCIAPEVENVSGKYFKDCAIANENGQAKSDQDAK
RLWDLSVEVTGLSEGS
Nucleotide sequence
Length: 1,095
>KH2012:KH.C1.596.v1.A.nonSL5-1
TCATTTGTTCCTACAGGTGGTGACTGGTGTAAATTGGTAGTACAGAGAATATGGAAAAGA
GTGCCCGTGGCAATTGGGTTATTTCGGATGTCAAAATGACAGGGAAAACCGTGGTAATAA
CAGGCGCAAACACTGGGATCGGATTGGAAACAGCAATCGACCTTGTAAAGCGCGAAGCAA
GAGTAATTCTCGGGTGTAGAAATATGGCGAAAGCTGAAGAAGCGAAGCAAAGGATTATAA
CGGAAACCGGCGGAAATGAAGATAAAATTATTTTAAAGCAACTAGATTTGGCATCTTTTG
CCTCAGTGCGCGCATTTGCAAAAGATGTGAATGAAAACGAAAGCAGAATCGACGTTTTAC
TTAACAACGCAGGTATAATGCTAATCCCGAAAGGAAAGACTGAAGACGGGTTTGAGCTTC
ATTACGGAGTGAACCATCTCGGGCATTTTCTTCTCACTAATCTATTACTCGATCTTGTAA
AGAAAAGCGCACCAAGTCGAATTATAAACGTATCATCGGAGGCACACAGACTTGGGAGCC
CCAGAATCGACTGGGACGACATGAATTACGACAACAATTATTCTGCATCGTTGGCTTACA
ACCGAAGCAAACTGATGAATATTTTATTTACAAGAGAGCTGAGCAGAAGATTAGAGGGTA
CCAAGGTAACGGCAAACAGCTTGCATCCTGGTGTTGTGAGAACAGAGCTTTCTCGGCATA
TGTTCGATTCAAATATATCTATGTGGAGAACTGCTGTCAAATGGATTGTGGACCCGCTTG
TTTATTTGTTCGGTAAAACTCCTGTACACGGAGCCCAGACTAATATCTACCTGTGCATTG
CACCGGAAGTGGAGAACGTCAGTGGGAAATATTTTAAAGATTGCGCGATTGCGAATGAAA
ATGGTCAAGCCAAGAGCGACCAGGATGCAAAAAGATTATGGGACTTGAGCGTTGAAGTTA
CGGGGTTGTCAGAGGGTTCTTAATCATGTTAAAGTTAATTTATATATACAGGAAAGGTTT
AACTATTTCTGTATACTTCGTTGTCCAATTCTAGTGAAAAATAACTGTAAAATAAATTAT
ATAATGAAAAAATAA
| SUPERFAMILY |
NAD(P)-bd_dom_sf (IPR036291) - T[22-286] 6.62E-59 |
| Pfam |
SDR_fam (IPR002347) - T[25-230] 2.7E-31 |
| PRINTS |
SDR_fam (IPR002347) - T[26-43] 8.5E-18 - T[104-115] 2.6E-6 - T[104-115] 8.5E-18 - T[149-165] 8.5E-18 - T[155-163] 2.6E-6 - T[189-208] 2.6E-6 - T[189-208] 8.5E-18 - T[210-227] 8.5E-18 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RDH11_HUMAN | 49.492 % | 265 | 1.58E-87 |
| RDH13_HUMAN | 47.869 % | 254 | 2.63E-83 |
| RDH14_HUMAN | 51.961 % | 280 | 3.34E-93 |
