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  1. Transcript 'KH2012:KH.C1.584.v1....'

Transcript Model

Transcript Id

KH2012:KH.C1.584.v1.A.nonSL3-1

Possible name(s)

CD63; TSPAN13; TSPAN31

Gene model

KH2012:KH.C1.584

Location

KhC1 [907,999 / 911,194]

Sequences

Amino acid sequence

Length: 224

>KH.C1.584.v1.A.nonSL3-1
NIIMCGGFTCSKNSLGFLNVVFLLVGVLLIAVAAYAKAAAQITSFEICGGIIASGLFLFL
IALLGLIATTKHHQVLLFFYIVILFLLFIIQFSVSIACLALSEMQVAKVLGNVWGTAPSN
TKNDAQAYFKCCGWLENDPTSQDCILAKACQELPTTTQITTNPATNSTPVCTTCSSIIPQ
TVSKGLEATGGIGLFFSFIEMLGVWLAVRFRNQKDPAANPSQFL

Nucleotide sequence

Length: 1,440

>KH2012:KH.C1.584.v1.A.nonSL3-1
TGATAGATAGCCTATATATTTGTGTTAAGTTTTGTGCGACTTTGTAGAACAGAAGATTAA
AGAAATATAACTGATATTACTTCATTCCTGATTGTGAGATAAAACATCATAATGTGTGGG
GGGTTTACTTGTTCAAAGAATTCACTTGGATTTTTAAATGTTGTGTTTTTGTTGGTTGGA
GTTCTTCTGATAGCAGTTGCAGCTTATGCAAAAGCTGCGGCTCAGATTACATCCTTTGAA
ATCTGTGGAGGAATAATCGCATCGGGATTATTTCTTTTCCTTATTGCACTTTTGGGATTA
ATTGCCACTACAAAACATCACCAAGTTTTGCTCTTTTTTTACATTGTAATCTTGTTTCTT
CTTTTCATCATTCAATTCTCTGTTTCAATTGCTTGTTTAGCTCTATCAGAAATGCAAGTG
GCCAAAGTTTTGGGAAATGTTTGGGGAACGGCGCCTTCAAATACAAAAAATGATGCTCAA
GCTTACTTTAAATGTTGTGGTTGGTTGGAAAATGACCCAACTTCACAGGATTGTATTTTA
GCAAAAGCTTGCCAGGAGCTACCGACAACAACACAAATCACAACAAACCCGGCAACGAAT
TCAACTCCTGTTTGTACGACATGCAGCTCAATTATCCCACAGACTGTTAGTAAGGGTTTG
GAGGCAACCGGGGGTATTGGTCTCTTCTTTAGTTTTATTGAGATGCTTGGAGTATGGTTA
GCGGTTCGTTTTAGAAATCAAAAGGACCCGGCTGCAAACCCAAGTCAGTTCTTATGAAGT
GGCAACTTATAACCAGAAGAAAATAAAGAGCTAACACGCTTTTCAAATGTTTTCTCTTGA
ACCATAAAACACAGTTGTAGTTTTTTTACACCCCTGCTCTTAGGAGACACACATTGTATC
GATATATGCTGTAGTTTTAATATAAATTAGTTACATCATCAAAAGGAAATTTTTAACGTT
CAATGTATACTGTTGTTTGTTGTGATAACCAGACACTGAACTCATGGTGTGCTGTTTTGT
ATTTTATTTATGCCCAACGTGTTAAAGCATATCAATTGAATTGGTCCTCATTGTACAATT
ACTGTACGAAGCAGGCAAGCGTACCTCTATGCTGATAAGTTACTGCTTTATTTAAATCCG
AATATGTTACTTGTGTAGATATGTGTTTGTGTGTGGAGCAGATTGTAACCATATGCTTTT
TCGCTTTTGAGTACCTGAAATTATTTGTAATTGTGCAGTAGTAGAGCGTTCTGCATGTTT
GGTACATGTAAATAGTGAATCTATGCCAAGATAATATAGCATTATTGTGTTAAACTTGCT
AATATTACTTAAGCATTGAATTTCGTATTCTGAATGAAAAGAAAAAAGGTATAGACTGTA
AAATAATATGTGGCATTGTCAGTAATATTATGTCACTGCAAACTTTTCTCAAAAACCCGA

InterProScan

PIRSF
Tetraspanin (IPR000301) - T[2-223] 5.6E-25
Pfam
Tetraspanin/Peripherin (IPR018499) - T[12-212] 1.9E-22
PRINTS
Tetraspanin (IPR000301) - T[13-36] 2.4E-12 - T[44-70] 2.4E-12 - T[71-99] 2.4E-12 - T[188-214] 2.4E-12

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TSN13_HUMAN 48.198 % 172 3.7E-54
TSN31_HUMAN 45.045 % 194 1.19E-62