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TRANSCRIPT CARD

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  1. Region 'REG00001491'
  2. Molecular Tool 'pGsx>OC::WRPW (Vassalli 2021)'
  3. Molecular Tool 'pBra>Neurogenin'
  4. Molecular Tool 'pCi-Bra::Tbx6c'
  5. Transcript 'KH2012:KH.C1.583.v2....'

Transcript Model

Transcript Id

KH2012:KH.C1.583.v2.A.SL2-1

Possible name(s)

CACNA2D2; CACNA2D3; CACNA2D4

Location

KhC1 [1,826,376 / 1,835,471]

Sequences

Amino acid sequence

Length: 582

>KH.C1.583.v2.A.SL2-1
GFGLISTVASTVYKMVPGEPTAFLGIMATDVPISDMMNSMPINRIGVNAYVYMVTNNAYV
MFHPWLETKYVGWDGKVKTKLDYNSIDIDKLEKDDGHAEIRSALVNRRTGQVSTKQHYTP
LDNDMKSLLISSGVYYFVPVADTPFSLAMFLPSKYGHTKVNYSANLRSIRYDAIIDEVHC
NEVQKQMRRNDWVEIDRIAAICSLRYSDVSVAETWRYCWFKNKQSIEEMGWLSQIDMLKR
YLLSPNSQTIKCNQELVNGVLFDVYLTATLQSVWSEQKMHQNTSGKGIEMTFFISRSGVV
RKYWHTDAQDAYKEDRNVVFRFDKLEYPLIYRRAVTQPKDSWLYVVPPTTRGNNKQVVFA
AKAVRQKEAIMGVSGLMLGYESFASLFWDEVAQVYGVDCMDRTNKRFCYLVDDNAKIVLS
KENQEVGRFFGEINGHVMNQLIEAKVFDRIVLTDETAMCQRERCNCSGKSEPFSPIRGLE
VEAAMEDTCWRAKIIKERKRPLSCLQAKEGAPVKEQPCTTEVKPPTNSGAKLLPFWGGIA
AKSSKGLRTFYSAWISCLTIHMVVIAVFSVICDGSLLRSPVL

Nucleotide sequence

Length: 1,994

>KH2012:KH.C1.583.v2.A.SL2-1
GGTTTCGGTTTGATAAGCACTGTTGCTTCCACAGTCTACAAGATGGTGCCCGGGGAACCG
ACTGCGTTCCTGGGTATAATGGCAACTGACGTGCCCATAAGTGACATGATGAATAGCATG
CCCATAAACAGGATTGGCGTGAACGCTTACGTATACATGGTCACCAACAATGCCTACGTT
ATGTTTCACCCATGGTTGGAAACAAAGTACGTTGGTTGGGATGGGAAGGTTAAAACTAAG
CTTGATTACAACAGCATAGACATTGACAAGTTGGAAAAGGATGACGGACACGCTGAAATT
AGGTCAGCTTTGGTAAATAGAAGAACTGGACAAGTTTCAACCAAGCAACATTACACACCT
CTGGATAACGACATGAAGTCACTCCTAATATCAAGTGGTGTGTATTACTTTGTGCCTGTG
GCTGACACTCCATTCAGTTTAGCCATGTTTCTACCATCTAAGTATGGCCACACCAAAGTC
AACTACTCAGCTAACCTACGATCTATAAGATATGATGCTATCATTGATGAGGTGCATTGT
AATGAGGTGCAGAAACAAATGCGAAGAAATGACTGGGTTGAGATTGATCGTATCGCTGCT
ATATGTTCATTAAGGTATAGCGACGTTAGTGTTGCTGAAACTTGGAGATATTGCTGGTTT
AAGAACAAACAAAGCATTGAAGAAATGGGATGGTTGTCGCAAATAGACATGCTGAAGCGA
TATCTCCTCTCTCCGAATAGCCAGACCATAAAATGTAACCAGGAGTTGGTGAATGGAGTA
TTGTTTGATGTTTATCTTACAGCGACACTTCAGTCTGTTTGGTCAGAACAAAAAATGCAT
CAAAATACTTCAGGCAAAGGCATTGAGATGACCTTCTTTATCTCCCGAAGTGGTGTAGTG
AGAAAGTATTGGCACACAGATGCACAAGATGCTTATAAGGAAGATAGGAATGTTGTATTT
AGATTTGATAAATTGGAATACCCGTTAATATACAGACGAGCTGTAACTCAACCTAAAGAT
AGTTGGTTGTATGTTGTACCCCCTACCACACGTGGTAACAATAAACAAGTTGTGTTTGCT
GCAAAAGCTGTGAGACAAAAAGAAGCAATTATGGGAGTGTCGGGTTTGATGCTCGGATAC
GAAAGTTTTGCTTCTTTGTTCTGGGATGAAGTGGCGCAAGTGTATGGGGTGGACTGTATG
GATAGGACGAACAAAAGGTTTTGTTACCTCGTGGATGACAATGCAAAGATTGTTCTTTCC
AAGGAGAATCAAGAAGTTGGTCGTTTCTTTGGCGAAATAAACGGGCACGTAATGAACCAA
TTAATCGAGGCGAAAGTTTTCGACCGTATCGTGTTAACCGATGAGACAGCAATGTGTCAA
AGAGAAAGATGTAATTGCTCTGGGAAGAGCGAGCCATTCTCTCCCATCAGAGGACTTGAG
GTGGAAGCAGCGATGGAAGACACTTGTTGGAGAGCAAAGATAATAAAGGAGAGGAAGAGA
CCTTTGTCATGTTTACAAGCTAAAGAAGGGGCACCTGTAAAGGAGCAACCATGTACAACT
GAGGTTAAGCCTCCAACTAATTCTGGAGCAAAACTCCTTCCGTTTTGGGGTGGCATTGCA
GCAAAGTCAAGTAAAGGCTTAAGGACGTTTTACTCAGCATGGATTTCATGCTTGACTATA
CATATGGTCGTGATTGCAGTATTTTCTGTGATATGTGATGGATCATTACTTAGGTCTCCT
GTTTTATGATGATGTCATTATGGTAGCATTATGGAGTAATGAATATGCAACTGTGATGTC
ATACAGTGTGTTGAGGTATCAACCCATAAGTTTGAACCCAAGTACACGGTGTTGGGTATA
AATTTCACCCCTTGTTCAAAGTACGGGATGTTGGGTGCAATTTCCATCTAATGTTTAACA
ACAGGGTGTTGGGTGTAAATTTACCCGATGTTAAAGTACAGGGTGTGGGTGTAAGTCCCA
CCTATCTTTTAACA

InterProScan

Pfam
VDCC_a2/dsu (IPR013680) - T[244-464] 2.8E-13

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CA2D4_HUMAN 27.455 % 190 1.52E-51
CA2D3_HUMAN 30.488 % 216 1.84E-60