- Transcript 'KH2012:KH.C1.57.v3.A...'
Transcript Model
Transcript Id
KH2012:KH.C1.57.v3.A.ND1-1
Possible name(s)
HPD; HPDL
Gene model
Location
KhC1 [8,628,861 / 8,634,215]
Amino acid sequence
Length: 406
>KH.C1.57.v3.A.ND1-1
IYILEYNKLTGSYFHIILMFLQTYHQKKGEKHEKGEFKCFDHVTFWVGNAKQAASFYSTH
MGFEPYAYRGLETGERNVVSHVVRQNDIIFVFQSALNPGNTLFGDHITKHGDAVKDVAFT
VEDCKALVEATKKRSEVAVVKDVWTESDENGSVNFAIVKTYGDTTHTLVERSGYKGLFLP
GYKPPLFVPAIYRTLSVPAIHHIDHVVGNQPDLKMIPAAEWYENNLLFHRFWSIDDDLMH
TEYSALRSTVVTNFQETIKMPLNEPAPGKRKSQIQEYCEYNDGPGVQHIAMHTNDIIAAI
EALRSRGMEFLTIPDTYYVKLKEKLSKSKTKVKEDMDVLQKHKILVDFDDNGYLLQIFTK
PMQDRPTFFLEVIQRRNHHGFGAGNFKTLFEAIEIDQAARGNLVAE
Nucleotide sequence
Length: 1,850
>KH2012:KH.C1.57.v3.A.ND1-1
CTTTTTTAAAGATAAAACGTATGGCTTGTTTATATATAAATATATATTTTGGAATACAAC
AAATTAACCGGTTCATATTTTCATATAATTTTGATGTTTTTGCAGACTTATCATCAAAAG
AAAGGAGAAAAGCACGAAAAAGGGGAATTTAAATGTTTTGATCATGTGACATTTTGGGTC
GGAAACGCAAAACAGGCAGCGAGTTTTTATTCCACTCATATGGGGTTTGAACCTTATGCC
TACCGTGGTCTCGAAACAGGAGAAAGAAACGTTGTCTCCCATGTTGTAAGACAAAATGAC
ATCATATTTGTGTTCCAATCTGCTTTAAACCCGGGCAACACTTTATTTGGAGATCACATC
ACCAAGCACGGGGACGCAGTGAAGGATGTCGCGTTCACTGTGGAGGATTGTAAAGCTCTT
GTGGAGGCGACCAAAAAGCGGAGCGAGGTTGCGGTAGTGAAAGATGTTTGGACCGAGAGC
GATGAAAATGGTTCGGTAAATTTTGCGATTGTTAAAACGTACGGTGATACAACGCACACA
CTGGTGGAAAGAAGTGGTTACAAAGGATTGTTCTTACCAGGGTATAAACCTCCACTGTTC
GTGCCGGCTATATATAGAACATTATCAGTTCCTGCCATCCACCACATCGATCATGTAGTT
GGAAACCAACCCGACCTGAAAATGATACCTGCTGCAGAATGGTACGAGAACAATCTTCTC
TTTCATCGATTCTGGTCGATTGACGACGACCTGATGCACACTGAGTACAGCGCTCTACGA
TCCACTGTTGTTACTAACTTCCAGGAAACGATAAAGATGCCTCTTAATGAACCAGCACCC
GGCAAGAGGAAGAGCCAGATCCAGGAGTATTGTGAATATAATGATGGGCCCGGGGTTCAG
CATATCGCAATGCATACGAATGATATTATAGCAGCAATTGAGGCTTTGCGATCACGCGGC
ATGGAGTTCCTTACAATCCCCGATACATACTACGTTAAATTGAAGGAAAAACTTTCCAAA
TCCAAAACTAAAGTTAAGGAAGACATGGATGTTTTGCAGAAACACAAGATTTTAGTTGAT
TTTGATGACAACGGTTATCTGCTCCAAATCTTCACGAAACCAATGCAGGACCGCCCAACT
TTCTTCCTGGAAGTTATTCAACGTCGTAATCATCATGGTTTTGGGGCTGGGAACTTCAAG
ACTTTGTTCGAAGCGATTGAAATTGACCAGGCAGCCCGTGGGAACCTCGTCGCAGAATAG
ATATCTTATAAAATAATTCAACATAAATCCACCTCAAATATTAATGTTTGCTAATATGTA
AAAATATTAATTAATTTTTATCAATCAAATGTGAGTATTTCAAAATAAATGTTATATAGT
TTAAAGTTAGATCCACCAAATGGAAACCCATCTGTGTATTATCATTGATATATTATTATG
TTTAATAAGTCTGTTTTATCTGGGGTTAATATATATAAAGTACTGTGAAGGTTGTCCCAT
ATTTCCTAATCAAGTTTTTCAACAATTACTAACAACCCTTTTAACCTATAACCTTTTACT
ATCTATGTAACATTGATATGAAAATAAGACGTTTTAAAATATAACTTCACTTATGTATTT
TAAGAGATTGTATTATATCTGTTTTTCCACTACTTTTAATGAAATAACTTCTTAATTTTA
GAGTGAACTTTGCTTTTAGCTGTTTTTCAGTGGTTTTAATTATTTATCTGTTTTGGAAAT
TATTTAATGAAATAGCATTGTGAGCAAATAATCTATGCTTCAGTATACACAACTGTTGAA
ACACATTTTGTATTAAATTTATGCGCAATAAAAGTTTGATGTGCCCAAAA
| Gene3D |
Glyas_Bleomycin-R_OHBP_Dase (IPR029068) - T[22-191] 5.2E-54 - T[198-405] 8.9E-86 |
| PIRSF |
4OHPhenylPyrv_dOase (IPR005956) - T[25-404] 1.2E-129 |
| PANTHER |
4OHPhenylPyrv_dOase (IPR005956) - T[27-405] 1.5E-156 |
| SUPERFAMILY |
Glyas_Bleomycin-R_OHBP_Dase (IPR029068) - T[37-390] 4.18E-85 |
| ProSiteProfiles |
VOC (IPR037523) - T[39-171] 20.218 - T[202-360] 22.654 |
| TIGRFAM |
4OHPhenylPyrv_dOase (IPR005956) - T[40-403] 2.3E-127 |
| Pfam |
Glyas_Fos-R_dOase_dom (IPR004360) - T[203-357] 7.2E-15 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HPDL_HUMAN | 28.571 % | 142 | 8.02E-39 |
| HPPD_HUMAN | 61.68 % | 506 | 3.92E-180 |
