- Transcript 'KH2012:KH.C1.57.v2.A...'
Transcript Model
Transcript Id
KH2012:KH.C1.57.v2.A.ND3-1
Possible name(s)
HPD; HPDL
Gene model
Location
KhC1 [8,627,789 / 8,634,215]
Amino acid sequence
Length: 396
>KH.C1.57.v2.A.ND3-1
SRSYSVYGYRLFTYHQKKGEKHEKGEFKCFDHVTFWVGNAKQAASFYSTHMGFEPYAYRG
LETGERNVVSHVVRQNDIIFVFQSALNPGNTLFGDHITKHGDAVKDVAFTVEDCKALVEA
TKKRSEVAVVKDVWTESDENGSVNFAIVKTYGDTTHTLVERSGYKGLFLPGYKPPLFVPA
IYRTLSVPAIHHIDHVVGNQPDLKMIPAAEWYENNLLFHRFWSIDDDLMHTEYSALRSTV
VTNFQETIKMPLNEPAPGKRKSQIQEYCEYNDGPGVQHIAMHTNDIIAAIEALRSRGMEF
LTIPDTYYVKLKEKLSKSKTKVKEDMDVLQKHKILVDFDDNGYLLQIFTKPMQDRPTFFL
EVIQRRNHHGFGAGNFKTLFEAIEIDQAARGNLVAE
Nucleotide sequence
Length: 1,783
>KH2012:KH.C1.57.v2.A.ND3-1
ATAGCCGTTCGTACAGTGTGTATGGGTATAGGTTATTCACTTATCATCAAAAGAAAGGAG
AAAAGCACGAAAAAGGGGAATTTAAATGTTTTGATCATGTGACATTTTGGGTCGGAAACG
CAAAACAGGCAGCGAGTTTTTATTCCACTCATATGGGGTTTGAACCTTATGCCTACCGTG
GTCTCGAAACAGGAGAAAGAAACGTTGTCTCCCATGTTGTAAGACAAAATGACATCATAT
TTGTGTTCCAATCTGCTTTAAACCCGGGCAACACTTTATTTGGAGATCACATCACCAAGC
ACGGGGACGCAGTGAAGGATGTCGCGTTCACTGTGGAGGATTGTAAAGCTCTTGTGGAGG
CGACCAAAAAGCGGAGCGAGGTTGCGGTAGTGAAAGATGTTTGGACCGAGAGCGATGAAA
ATGGTTCGGTAAATTTTGCGATTGTTAAAACGTACGGTGATACAACGCACACACTGGTGG
AAAGAAGTGGTTACAAAGGATTGTTCTTACCAGGGTATAAACCTCCACTGTTCGTGCCGG
CTATATATAGAACATTATCAGTTCCTGCCATCCACCACATCGATCATGTAGTTGGAAACC
AACCCGACCTGAAAATGATACCTGCTGCAGAATGGTACGAGAACAATCTTCTCTTTCATC
GATTCTGGTCGATTGACGACGACCTGATGCACACTGAGTACAGCGCTCTACGATCCACTG
TTGTTACTAACTTCCAGGAAACGATAAAGATGCCTCTTAATGAACCAGCACCCGGCAAGA
GGAAGAGCCAGATCCAGGAGTATTGTGAATATAATGATGGGCCCGGGGTTCAGCATATCG
CAATGCATACGAATGATATTATAGCAGCAATTGAGGCTTTGCGATCACGCGGCATGGAGT
TCCTTACAATCCCCGATACATACTACGTTAAATTGAAGGAAAAACTTTCCAAATCCAAAA
CTAAAGTTAAGGAAGACATGGATGTTTTGCAGAAACACAAGATTTTAGTTGATTTTGATG
ACAACGGTTATCTGCTCCAAATCTTCACGAAACCAATGCAGGACCGCCCAACTTTCTTCC
TGGAAGTTATTCAACGTCGTAATCATCATGGTTTTGGGGCTGGGAACTTCAAGACTTTGT
TCGAAGCGATTGAAATTGACCAGGCAGCCCGTGGGAACCTCGTCGCAGAATAGATATCTT
ATAAAATAATTCAACATAAATCCACCTCAAATATTAATGTTTGCTAATATGTAAAAATAT
TAATTAATTTTTATCAATCAAATGTGAGTATTTCAAAATAAATGTTATATAGTTTAAAGT
TAGATCCACCAAATGGAAACCCATCTGTGTATTATCATTGATATATTATTATGTTTAATA
AGTCTGTTTTATCTGGGGTTAATATATATAAAGTACTGTGAAGGTTGTCCCATATTTCCT
AATCAAGTTTTTCAACAATTACTAACAACCCTTTTAACCTATAACCTTTTACTATCTATG
TAACATTGATATGAAAATAAGACGTTTTAAAATATAACTTCACTTATGTATTTTAAGAGA
TTGTATTATATCTGTTTTTCCACTACTTTTAATGAAATAACTTCTTAATTTTAGAGTGAA
CTTTGCTTTTAGCTGTTTTTCAGTGGTTTTAATTATTTATCTGTTTTGGAAATTATTTAA
TGAAATAGCATTGTGAGCAAATAATCTATGCTTCAGTATACACAACTGTTGAAACACATT
TTGTATTAAATTTATGCGCAATAAAAGTTTGATGTGCCCAAAA
| Gene3D |
Glyas_Bleomycin-R_OHBP_Dase (IPR029068) - T[12-181] 4.8E-54 - T[188-395] 8.4E-86 |
| PIRSF |
4OHPhenylPyrv_dOase (IPR005956) - T[15-394] 1.1E-129 |
| PANTHER |
4OHPhenylPyrv_dOase (IPR005956) - T[17-395] 1.2E-156 |
| SUPERFAMILY |
Glyas_Bleomycin-R_OHBP_Dase (IPR029068) - T[27-380] 3.82E-85 |
| ProSiteProfiles |
VOC (IPR037523) - T[29-161] 20.218 - T[192-350] 22.654 |
| TIGRFAM |
4OHPhenylPyrv_dOase (IPR005956) - T[30-393] 2.1E-127 |
| Pfam |
Glyas_Fos-R_dOase_dom (IPR004360) - T[193-347] 6.8E-15 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HPDL_HUMAN | 28.571 % | 142 | 6.51E-39 |
| HPPD_HUMAN | 61.518 % | 506 | 2.65E-180 |
