- Transcript 'KH2012:KH.C1.57.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.C1.57.v1.A.SL2-1
Possible name(s)
HPD; HPDL
Gene model
Location
KhC1 [8,628,598 / 8,634,215]
Amino acid sequence
Length: 402
>KH.C1.57.v1.A.SL2-1
FIFIYFVCLVLLLQSIIMTYHQKKGEKHEKGEFKCFDHVTFWVGNAKQAASFYSTHMGFE
PYAYRGLETGERNVVSHVVRQNDIIFVFQSALNPGNTLFGDHITKHGDAVKDVAFTVEDC
KALVEATKKRSEVAVVKDVWTESDENGSVNFAIVKTYGDTTHTLVERSGYKGLFLPGYKP
PLFVPAIYRTLSVPAIHHIDHVVGNQPDLKMIPAAEWYENNLLFHRFWSIDDDLMHTEYS
ALRSTVVTNFQETIKMPLNEPAPGKRKSQIQEYCEYNDGPGVQHIAMHTNDIIAAIEALR
SRGMEFLTIPDTYYVKLKEKLSKSKTKVKEDMDVLQKHKILVDFDDNGYLLQIFTKPMQD
RPTFFLEVIQRRNHHGFGAGNFKTLFEAIEIDQAARGNLVAE
Nucleotide sequence
Length: 1,801
>KH2012:KH.C1.57.v1.A.SL2-1
ATTTTATATTCATTTATTTTGTTTGTTTAGTTTTACTTTTGCAATCAATAATCATGACTT
ATCATCAAAAGAAAGGAGAAAAGCACGAAAAAGGGGAATTTAAATGTTTTGATCATGTGA
CATTTTGGGTCGGAAACGCAAAACAGGCAGCGAGTTTTTATTCCACTCATATGGGGTTTG
AACCTTATGCCTACCGTGGTCTCGAAACAGGAGAAAGAAACGTTGTCTCCCATGTTGTAA
GACAAAATGACATCATATTTGTGTTCCAATCTGCTTTAAACCCGGGCAACACTTTATTTG
GAGATCACATCACCAAGCACGGGGACGCAGTGAAGGATGTCGCGTTCACTGTGGAGGATT
GTAAAGCTCTTGTGGAGGCGACCAAAAAGCGGAGCGAGGTTGCGGTAGTGAAAGATGTTT
GGACCGAGAGCGATGAAAATGGTTCGGTAAATTTTGCGATTGTTAAAACGTACGGTGATA
CAACGCACACACTGGTGGAAAGAAGTGGTTACAAAGGATTGTTCTTACCAGGGTATAAAC
CTCCACTGTTCGTGCCGGCTATATATAGAACATTATCAGTTCCTGCCATCCACCACATCG
ATCATGTAGTTGGAAACCAACCCGACCTGAAAATGATACCTGCTGCAGAATGGTACGAGA
ACAATCTTCTCTTTCATCGATTCTGGTCGATTGACGACGACCTGATGCACACTGAGTACA
GCGCTCTACGATCCACTGTTGTTACTAACTTCCAGGAAACGATAAAGATGCCTCTTAATG
AACCAGCACCCGGCAAGAGGAAGAGCCAGATCCAGGAGTATTGTGAATATAATGATGGGC
CCGGGGTTCAGCATATCGCAATGCATACGAATGATATTATAGCAGCAATTGAGGCTTTGC
GATCACGCGGCATGGAGTTCCTTACAATCCCCGATACATACTACGTTAAATTGAAGGAAA
AACTTTCCAAATCCAAAACTAAAGTTAAGGAAGACATGGATGTTTTGCAGAAACACAAGA
TTTTAGTTGATTTTGATGACAACGGTTATCTGCTCCAAATCTTCACGAAACCAATGCAGG
ACCGCCCAACTTTCTTCCTGGAAGTTATTCAACGTCGTAATCATCATGGTTTTGGGGCTG
GGAACTTCAAGACTTTGTTCGAAGCGATTGAAATTGACCAGGCAGCCCGTGGGAACCTCG
TCGCAGAATAGATATCTTATAAAATAATTCAACATAAATCCACCTCAAATATTAATGTTT
GCTAATATGTAAAAATATTAATTAATTTTTATCAATCAAATGTGAGTATTTCAAAATAAA
TGTTATATAGTTTAAAGTTAGATCCACCAAATGGAAACCCATCTGTGTATTATCATTGAT
ATATTATTATGTTTAATAAGTCTGTTTTATCTGGGGTTAATATATATAAAGTACTGTGAA
GGTTGTCCCATATTTCCTAATCAAGTTTTTCAACAATTACTAACAACCCTTTTAACCTAT
AACCTTTTACTATCTATGTAACATTGATATGAAAATAAGACGTTTTAAAATATAACTTCA
CTTATGTATTTTAAGAGATTGTATTATATCTGTTTTTCCACTACTTTTAATGAAATAACT
TCTTAATTTTAGAGTGAACTTTGCTTTTAGCTGTTTTTCAGTGGTTTTAATTATTTATCT
GTTTTGGAAATTATTTAATGAAATAGCATTGTGAGCAAATAATCTATGCTTCAGTATACA
CAACTGTTGAAACACATTTTGTATTAAATTTATGCGCAATAAAAGTTTGATGTGCCCAAA
A
| Gene3D |
Glyas_Bleomycin-R_OHBP_Dase (IPR029068) - T[18-187] 3.4E-54 - T[194-401] 8.7E-86 |
| PIRSF |
4OHPhenylPyrv_dOase (IPR005956) - T[21-400] 1.1E-129 |
| PANTHER |
4OHPhenylPyrv_dOase (IPR005956) - T[23-401] 1.3E-156 |
| SUPERFAMILY |
Glyas_Bleomycin-R_OHBP_Dase (IPR029068) - T[33-386] 4.04E-85 |
| ProSiteProfiles |
VOC (IPR037523) - T[35-167] 20.218 - T[198-356] 22.654 |
| TIGRFAM |
4OHPhenylPyrv_dOase (IPR005956) - T[36-399] 2.2E-127 |
| Pfam |
Glyas_Fos-R_dOase_dom (IPR004360) - T[199-353] 7.0E-15 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| HPDL_HUMAN | 28.571 % | 142 | 7.01E-39 |
| HPPD_HUMAN | 61.78 % | 508 | 0 |
