- Transcript 'KH2012:KH.C1.508.v3....'
Transcript Model
Transcript Id
KH2012:KH.C1.508.v3.A.SL2-2
Possible name(s)
ITGB1; ITGB6; ITGB7
Gene model
Location
KhC1 [4,634,593 / 4,650,938]
Amino acid sequence
Length: 376
>KH.C1.508.v3.A.SL2-2
LYWCVYMALVKAATNPCIDSKAKSCSDCISIPGCAWCEDSNYANNPNVVISRCDLPENLE
VEGERCPEHAIINPRSNQTIDSKGNKPHSNVGESAVGKATQIRPQIINSRIRPGDPLNIE
LSFKQAEDYPVDLYYLLDLSKSMENDLNSLRALGRELGTSMQNITRDFRLGFGSFIDKTV
MPYISTVPAKIRNPCNDKAPCVPTYSFHNDLPLTPEIDAFVNSVNNVTHSSNLDNPEGGL
DAMMQAIVCKEKINWRKDATHLLVYSTDASFHYAGDGKLGGIVLPNDGNCYLDDNGHYYN
ANAMRRLASKTELVPVRLFSLMTSLALVLLLLLKRRTRKNLAFTMSDFGKYENETITICT
FYMPGYSCSIIERNVN
Nucleotide sequence
Length: 1,187
>KH2012:KH.C1.508.v3.A.SL2-2
TGTTATATTGGTGTGTTTATATGGCTCTAGTTAAAGCTGCAACCAACCCATGTATCGATA
GCAAGGCCAAATCGTGCAGTGATTGTATCAGCATACCTGGATGTGCATGGTGTGAAGATT
CCAATTATGCAAACAATCCTAATGTTGTTATTTCTCGATGTGATTTACCTGAAAACCTGG
AAGTGGAGGGTGAAAGATGTCCAGAACATGCAATTATTAATCCAAGGTCTAATCAAACTA
TTGACAGTAAAGGAAACAAACCTCATTCAAATGTGGGCGAATCAGCTGTGGGTAAAGCGA
CTCAGATTCGTCCTCAGATTATTAATTCAAGGATAAGACCAGGTGATCCCCTGAATATTG
AACTTTCGTTTAAACAAGCTGAAGATTATCCGGTTGATCTTTATTATCTGCTTGATCTTT
CAAAATCTATGGAAAATGATCTTAACTCGTTAAGAGCACTAGGTCGAGAGTTAGGAACCA
GTATGCAGAATATCACAAGAGATTTTCGTCTTGGATTTGGTTCATTTATCGATAAAACAG
TCATGCCGTACATTTCAACTGTACCTGCCAAAATTAGAAACCCATGCAATGATAAAGCAC
CATGTGTTCCAACATATAGTTTCCACAATGACTTACCTTTAACTCCTGAGATCGATGCCT
TTGTTAACTCTGTAAATAATGTAACACACTCTTCCAACCTTGATAATCCTGAGGGTGGTC
TTGATGCTATGATGCAAGCTATTGTGTGTAAGGAAAAAATCAACTGGAGAAAAGATGCAA
CACATCTTCTTGTGTATTCGACTGATGCGAGTTTTCATTATGCTGGGGATGGAAAGCTTG
GTGGAATTGTTCTTCCCAACGATGGAAATTGTTACTTGGATGATAACGGTCATTATTATA
ATGCTAATGCGATGCGGCGACTTGCATCTAAAACGGAACTTGTTCCCGTGCGCCTTTTCT
CTTTAATGACATCATTAGCGCTCGTACTCCTGCTATTACTTAAACGCCGCACTCGAAAAA
ACTTAGCTTTTACCATGTCCGATTTTGGAAAATATGAAAACGAAACTATCACGATTTGCA
CATTTTACATGCCTGGCTACAGTTGTAGTATCATTGAACGAAATGTGAATTAAACTCGAC
TGTACTCTTGAAGAGATATGTACTCGTCAATACAACGTTTTAATCTA
| Pfam |
Integrin_beta_N (IPR033760) - T[15-66] 5.2E-10 |
| PRINTS |
Integrin_bsu (IPR015812) - T[21-37] 3.1E-51 - T[101-114] 3.1E-51 - T[129-147] 3.1E-51 - T[169-188] 3.1E-51 - T[201-220] 3.1E-51 - T[234-256] 3.1E-51 - T[261-276] 3.1E-51 |
| SMART |
Integrin_bsu_VWA (IPR002369) - T[24-368] 4.5E-95 |
| SUPERFAMILY |
vWFA_dom_sf (IPR036465) - T[126-309] 3.71E-58 |
| Pfam |
Integrin_bsu_VWA (IPR002369) - T[126-304] 5.7E-81 |
| Gene3D |
vWFA_dom_sf (IPR036465) - T[126-304] 2.5E-94 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ITB7_HUMAN | 40.541 % | 256 | 1.5E-78 |
| ITB6_HUMAN | 45.205 % | 254 | 1.01E-77 |
| ITB1_HUMAN | 43.714 % | 281 | 5.62E-88 |