- Transcript 'KH2012:KH.C1.48.v1.A...' >
- Transcript 'KH2012:KH.C1.48.v1.A...'
Transcript Model
Transcript Id
KH2012:KH.C1.48.v1.A.SL1-1
Possible name(s)
AL139011.2; DCAF8; DCAF8L2
Gene model
Location
KhC1 [2,201,290 / 2,207,575]
Amino acid sequence
Length: 732
>KH.C1.48.v1.A.SL1-1
LHTNFTMSDDSSKHETPKTPEVDMDDSGFLTSSTGAASSSPNFLIPDENVTSTSDYTEDQ
TFSDSVKSSNKKSKANTGLAGDIVDKTNIIAKDPDSSNHCSGDAKQTPAADICPKEEQKN
KEALNKDIEEDVSEGHALEKCKIDDASPSEKRTGVSHRLKRGSDVSDNSDENGSKNVEEN
KMSVPTDAKKIKTSDASSDESNEFKDANEPCESSGTRKSGIRNYSDLTSDEDDVGPSSET
SSFSLSSESDTVPISSDGAKEKVEEEEAWLGKDISDLPFPQWNSVCSLRERQTLACRRYW
TSKVCGSLAMTKRLELQWKLEKHDGCVNALNFNQSGTLLASGSDDLHVMLWDWKDKFADP
VISYDSGHRSNVFQAKFLPNCGDSSVVSSARDGQVRVADISSTGSCRGTKKVAQHRGSAH
KLSLDVASRSTLLSCGEDGVVFGIDLRLDKPAEKLVTTKVANRRIPLYSIHNNPGRPHEF
AVSGRDSRARIYDRRMLPTSGESTEPVKLFCPHHLEDASNVKANITCLVYNWCGSELLCS
YNDEDIYLFDTSHSSGADYIKRYKGHRNNATVKGVNFYGPRSEFVVSGSDCGNIFFWEKR
SSRVVQLMEGDDGGVVNVLEPHPSFPILATSGLDHEVKIWAPTASGMGEVNEMSRLKECM
LTNKRDREQERQGMSSTIDGHLMWFLMRTLRGRRRTERREGEEISSEEDDAQFSSGDSSD
SEDEGIPRCTQS
Nucleotide sequence
Length: 2,980
>KH2012:KH.C1.48.v1.A.SL1-1
AAAGAAAGAATAGCAATTTTAGTTATTTCTTACAGATTACAAAGCAATACTATACTGTAT
AGGTTTATATACGTTATATACATGTGGCTAATGTGCGCTTCATATACCATGGTGTACACC
AAATGCACAATCAAAAAAGTCTAAGTACAAGGACACTTCATTACAAAATAACTACATACT
AACTTCACTATGAGTGATGACAGCTCTAAACACGAAACTCCTAAAACACCGGAAGTCGAT
ATGGACGATTCTGGCTTCTTAACATCAAGCACTGGTGCCGCTTCTTCATCACCAAACTTT
TTAATACCGGATGAAAATGTTACTTCCACATCCGATTACACAGAAGATCAGACATTTTCT
GATTCTGTTAAAAGTTCGAATAAAAAGTCCAAGGCGAACACTGGCCTTGCTGGTGATATA
GTAGATAAAACAAACATTATTGCTAAAGACCCTGATAGTTCCAACCACTGTAGTGGTGAT
GCAAAGCAAACCCCTGCAGCAGACATATGCCCAAAGGAAGAACAGAAAAATAAAGAAGCT
CTTAATAAAGACATTGAAGAAGACGTCTCCGAAGGGCATGCTTTGGAAAAATGTAAAATA
GACGATGCCTCTCCATCAGAGAAGCGAACTGGTGTTTCTCATAGGTTAAAAAGGGGGTCA
GATGTGTCAGACAATAGTGACGAAAATGGTTCAAAAAATGTGGAAGAAAATAAAATGTCT
GTTCCAACTGATGCGAAAAAAATAAAGACATCAGATGCAAGCTCAGATGAAAGCAACGAG
TTTAAAGACGCAAATGAACCATGTGAAAGCAGTGGTACAAGAAAATCTGGTATACGGAAT
TACAGTGATCTTACTTCTGATGAAGATGATGTAGGACCTAGCTCAGAAACGTCAAGTTTT
TCACTGAGTTCAGAGTCAGACACTGTCCCCATTTCATCTGATGGAGCGAAAGAAAAAGTG
GAAGAAGAAGAAGCATGGCTTGGTAAGGACATCAGTGATCTTCCATTTCCACAGTGGAAT
TCAGTGTGTAGTCTTCGAGAGCGACAGACACTTGCATGTAGAAGATACTGGACCTCAAAG
GTATGTGGTTCCCTAGCAATGACCAAACGTCTTGAATTACAATGGAAATTGGAGAAACAT
GACGGTTGTGTGAACGCTCTTAACTTTAACCAGTCTGGTACATTGTTGGCATCGGGTAGT
GATGATCTTCATGTAATGTTATGGGACTGGAAGGACAAATTCGCAGATCCTGTTATTTCT
TATGACTCCGGACACAGAAGTAATGTATTTCAAGCAAAATTTCTTCCAAACTGCGGAGAT
TCATCTGTTGTTAGTTCTGCCAGGGATGGCCAGGTAAGAGTTGCTGATATATCTTCCACT
GGAAGTTGCAGAGGAACAAAGAAAGTTGCTCAGCATCGGGGATCAGCTCATAAGTTATCA
TTGGATGTTGCATCCAGATCCACCCTCTTATCTTGTGGGGAAGATGGAGTTGTGTTTGGA
ATTGATCTTCGTTTAGATAAACCCGCCGAAAAACTGGTCACAACCAAAGTTGCAAACCGT
CGAATCCCTCTCTACTCAATCCACAACAACCCAGGACGTCCTCACGAGTTTGCTGTTAGT
GGAAGAGACTCTCGAGCCAGGATATATGATCGTAGGATGCTGCCAACAAGTGGTGAATCC
ACGGAGCCCGTAAAGCTCTTCTGCCCGCATCATTTGGAAGATGCATCAAACGTAAAAGCC
AACATCACTTGTCTTGTGTATAACTGGTGCGGAAGTGAGTTGCTATGCAGTTATAATGAT
GAAGATATTTATCTCTTTGATACCTCCCATTCTTCAGGAGCAGATTATATTAAAAGATAT
AAGGGCCACAGAAACAATGCAACTGTCAAAGGAGTCAACTTCTATGGCCCACGATCGGAG
TTCGTTGTTTCAGGCAGTGACTGCGGGAACATCTTTTTCTGGGAGAAAAGATCATCCAGG
GTAGTCCAGCTTATGGAAGGTGATGATGGAGGTGTAGTTAACGTGTTAGAACCTCACCCA
AGCTTTCCAATCCTTGCCACCAGTGGTTTAGATCATGAAGTGAAAATATGGGCGCCCACT
GCAAGCGGAATGGGTGAAGTAAACGAAATGAGTCGTCTAAAAGAGTGCATGCTGACGAAT
AAAAGGGACCGTGAACAAGAAAGACAAGGAATGTCATCTACAATTGATGGCCATCTAATG
TGGTTTCTTATGAGAACATTACGTGGTCGCAGGAGAACGGAACGAAGAGAAGGAGAAGAG
ATCAGCTCGGAAGAAGATGATGCTCAATTCTCCTCCGGTGACTCCTCTGATTCAGAAGAC
GAAGGAATACCAAGATGCACGCAATCCTGAAGAACTCAACATCATATGCTTAAACACTGC
AATATTAATTGTCTCCAAAACTGTCTTCTTTTTCTTCCTCTAATTTATTACAATTTTGTC
TCTCTGCTCAAAAGCTTATTGTTTTACAACTTTTTTTGTTGCCTGATGCAAAGTATTTAC
AGACTGACAGTTAGAAAAACAAATTTTCTTTTATTTATTAATAAGCTAAAACAGAACACA
TGCTAGTTTCTCTAAGTGCTTTCTTAGGTTTGCTATATTCTGTATTTAAAGTAGTGACAT
CTTTTTTTATGCAACACTGCAAGGAAATCTGGAAACACCGTGAAAAATTCATTGTTTTAG
TTTCAGAATATTTTAAAACAACTACAAAAATAAATCCTGTTCCCCTATCATACCATGTCA
CTTGCTTAGCATGCCAAGTATGACATCTACATCAATAACTTTTGCCATTAAAGCAATGTA
AATTATGTAAAAATTATCCACAAGTCACTACAGAGTGTTGCCTTTCGTTGCTTCCCACTG
ACTTTTTTGTTTTTTATTTAACTGTGAGTGAGCGTCATTGTTTTCTTGAGTAATTCTGCA
AGAAAATTGCAGAAGTTTATCAGTTAGCAAAACACATGAT
| Gene3D |
WD40/YVTN_repeat-like_dom_sf (IPR015943) - T[306-643] 2.7E-46 |
| SMART |
WD40_repeat (IPR001680) - T[313-352] 2.3E-6 - T[357-399] 0.82 - T[403-445] 58.0 - T[452-493] 25.0 - T[503-550] 14.0 - T[556-598] 0.95 - T[601-641] 0.57 |
| SUPERFAMILY |
WD40_repeat_dom_sf (IPR036322) - T[315-640] 1.98E-46 |
| Pfam |
WD40_repeat (IPR001680) - T[316-352] 9.4E-6 |
| ProSiteProfiles |
WD40_repeat_dom (IPR017986) - T[320-650] 17.06 |
| ProSiteProfiles |
WD40_repeat (IPR001680) - T[320-352] 13.282 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DCAF8_HUMAN | 57.72 % | 513 | 5.34E-175 |
| DC8L2_HUMAN | 50.766 % | 462 | 1.21E-154 |
| DC8L1_HUMAN | 48.315 % | 439 | 5.66E-146 |