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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.S406.21.v1...' > 
  2. EST 'AHC0AAA220YH17_RM1' > 
  3. Transcript 'KH2012:KH.C14.6.v1.A...'

Transcript Model

Transcript Id

KH2012:KH.C14.6.v1.A.ND1-1

Possible name(s)

CNOT3

Gene model

KH2012:KH.C14.6

Location

KhC14 [1,486,071 / 1,489,564]

Sequences

Amino acid sequence

Length: 734

>KH.C14.6.v1.A.ND1-1
CYCATVAFLDTKEVPDKNNMADKRKLQGEMERCYKKVTEGVETFEDIWMKLSNANNTNQK
DKYESDLKKEIKKLQRLRDQIKTWAASNEVKDKRLLLENRKLIETQMERFKVVERETKTK
AYSKEGLGLAAKKDPEQKEREETMQWLQSTIDAINRQVDMFESEIESFNSISRKKKLTAD
KTVRQAELVAFLEKHRYHIRNLETLMRMLDNETISADKINIIRDDIEYYMEACQDPDYED
NEFIYEDMGLDESIVAITATAGSPGPGEKISNTSLNNNSSKDEDEIKSADSSPTPQNNTN
HSTPSSIKEEEPRKRSKSDDLISPHKPINNIQRQTSTTPRSMAFQPTNPITTNKPQKGPP
PTAHSQPYAAAAGGMQSVTSNHVSQTQVTASRTILPPESPSPTKKSQAQRSFESSWHGSN
HSSLSEANNVEVRNAVNSIVSSVASLSLTSNPEPATSPPVTVSNLPDLVGSVTPAPTEAP
HSQTPTTNGPSLPNGPQTSHVDLSSLKSMAEQAIANAGLEQRTVTSPPFPPHNTEPLITA
TNQSRPDLTSLSVVVQQQQTAAQQLPMGGGEARIQPLLGVAPLGPVSLSKENMYQQAMLD
ACWRHMPHPSDSERLRHYLPRNPCPTPSYYHQTPLPHHDSVEFYLRLSTETLFFIFYYME
ATKAQYMAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEYEQGTYIYFDYEKWGQRKKEG
FTFEYRYLEDRELQ

Nucleotide sequence

Length: 3,426

>KH2012:KH.C14.6.v1.A.ND1-1
GGGAAATCTTGCTGTGAATATCTTAATGTTACTGTGCTACTGTTGCGTTTTTGGACACAA
AAGAGGTACCTGACAAAAACAACATGGCTGACAAACGAAAACTGCAAGGTGAAATGGAGC
GGTGTTATAAAAAAGTAACTGAAGGCGTGGAGACTTTCGAAGACATTTGGATGAAGCTAT
CAAATGCTAACAACACAAATCAGAAGGATAAGTATGAAAGTGACCTGAAAAAAGAAATAA
AAAAATTGCAGAGGTTAAGGGACCAAATCAAAACGTGGGCAGCGTCAAATGAAGTCAAAG
ATAAAAGGCTACTTTTAGAAAACCGGAAATTAATTGAAACACAGATGGAGCGTTTTAAAG
TTGTAGAAAGAGAGACGAAAACCAAGGCGTATTCGAAAGAAGGGCTTGGTTTAGCGGCGA
AAAAAGATCCAGAGCAAAAGGAGAGAGAAGAAACGATGCAGTGGCTGCAAAGTACGATAG
ATGCAATTAATCGGCAAGTGGATATGTTTGAGAGCGAAATTGAATCTTTTAACTCGATCT
CAAGAAAAAAGAAGTTGACGGCCGATAAAACGGTGCGGCAGGCGGAGTTAGTGGCCTTCC
TTGAAAAACATAGATACCATATACGGAACCTTGAAACCCTAATGAGAATGCTAGACAACG
AGACGATATCAGCGGACAAAATCAACATAATTAGAGATGATATTGAGTATTACATGGAGG
CATGCCAGGACCCTGATTATGAAGATAATGAGTTCATATATGAGGACATGGGATTGGACG
AATCAATTGTCGCTATCACTGCTACAGCAGGGTCACCAGGTCCTGGGGAAAAGATTTCTA
ACACCAGTTTGAATAACAACAGCTCAAAAGACGAGGATGAAATAAAGTCTGCAGATTCTT
CCCCCACCCCACAGAACAACACCAATCATTCAACCCCTTCTAGTATAAAAGAAGAAGAGC
CTAGAAAAAGAAGCAAATCTGATGACCTTATTTCGCCCCATAAACCAATCAATAATATAC
AGAGGCAAACGTCTACAACTCCCAGGTCCATGGCTTTTCAGCCTACCAATCCTATTACAA
CCAATAAACCACAGAAAGGTCCGCCCCCAACAGCACATAGTCAGCCATACGCTGCAGCTG
CAGGTGGAATGCAATCTGTAACCTCTAATCATGTTTCCCAGACCCAAGTCACTGCTTCAA
GAACCATTCTTCCACCAGAGTCACCGTCACCGACAAAAAAATCCCAGGCCCAGAGGTCAT
TTGAGTCCTCCTGGCATGGTAGCAATCATAGCTCGTTATCGGAAGCTAATAATGTTGAAG
TTAGAAACGCAGTTAATAGCATCGTTTCAAGCGTTGCGTCTCTTTCGCTTACTTCAAATC
CGGAGCCGGCAACCTCACCGCCTGTCACTGTTTCAAACTTACCCGACTTAGTGGGTTCTG
TAACCCCTGCCCCAACCGAAGCCCCACATTCCCAAACCCCAACGACGAATGGACCCAGCT
TACCAAACGGCCCTCAAACCTCTCATGTCGATTTATCATCATTGAAAAGTATGGCAGAGC
AAGCAATCGCGAATGCTGGTTTAGAGCAGAGAACCGTAACTTCTCCTCCCTTTCCACCAC
ACAATACAGAGCCGCTTATAACCGCAACAAACCAGTCTAGACCGGATTTAACATCATTAA
GTGTTGTGGTTCAACAGCAGCAAACAGCTGCTCAACAACTGCCTATGGGTGGCGGAGAAG
CAAGAATTCAACCCCTTCTTGGAGTTGCTCCATTAGGCCCAGTATCACTCAGTAAAGAGA
ATATGTACCAGCAAGCAATGCTAGATGCGTGTTGGAGGCATATGCCGCACCCTTCAGATT
CAGAGCGTTTGCGCCATTACCTTCCAAGAAACCCCTGTCCCACCCCTTCCTATTACCACC
AGACCCCTTTACCCCATCATGACTCCGTGGAGTTTTACCTACGGCTGTCGACGGAGACGC
TCTTTTTTATTTTCTACTACATGGAGGCAACTAAGGCCCAATACATGGCGGCCAAGGCAC
TGAAGAAGCAGTCCTGGCGCTTCCATACAAAGTACATGATGTGGTTTCAGCGCCACGAAG
AACCCAAGACCATCACAGATGAATATGAGCAAGGTACCTACATTTACTTTGACTATGAGA
AGTGGGGCCAGCGGAAAAAGGAAGGCTTCACCTTTGAGTACAGGTATTTGGAGGACCGGG
AGCTGCAGTAGCTTCCACGAACCAAACACACACATTCCCAGTTTCAATTGTGCAATGTCT
CGAAATTGCATTGGCATAAAAAAAACCTTGAGCTGCTGTAAGTGGCTTGAACACAAATAT
GGTAGCTTTGGTACACTTTAATTCCTATAAAAAGAAACTGGAACACATAAAACTTCTACT
TGGTAAACTAACTTAATCTATGCGACATGAATTTGTTTTTCTTTTACTTGCACTTTACCA
CTGATTAAGAGAAAATTCTGTATCTTGCCCACCATGAAACATTTAAACTCTAACCTATAT
TTTTGGACAAAAAGTTCTAACACACTTTTTACTTTCAGTTTTATTCTACTTTTTATAAGG
CCCGTGCTCGGCCGTGTTAAAATAAAACAAATTTCTTGTCCCCAGCGTAGACCTAAACAC
GCATAATGTTCAAATTTTTGCGAAAGTGTTCCCAAACTTGCCCCATTATTCAGAACCCCA
CTGGTTGAAATGACATCGAGAAAAGTAAAAAACAATGTGTGTTTCAAGTACTCTTTCACA
CAATTAATAAAAGAGTACCACTGAATTGTTTATTTTGTTAATTTGTTAAACAACGGTAAA
GAGAGAGTTTACAGACCGTAATTTTGCCATCAAGATATTTTATAAGAACGCTTAGTCTTA
ACTTTTAAGATACAGTTTAAATGCTAGTATTACTGTAAGTTCAGCATTCAAAGTCAAATA
GACACTTTACTGACTTTAGTATTAGTCCCAGTGTAGCGTTTTAACTATATGTTTGAACAG
TTCACATCGTACGAAAAGTTGATAATGTAAAATTAAGGTCATACGCATATGATAAATACG
ATGATATATTTCTAATGTAATTCAGAGTCAGAGATATTTGATTTTAAATCAAAAACATTT
TACTCTATAATAACTATAACAAATATTTTTTGGGTCTAGAATGTTTTTTGGCCGCCATAA
CATTTATATCAACATTTATATCGACTAAAAATCTTTGGGCCGTTATTAGCGTTTTTTGTT
CGTCACAATTCTATTTTGGCCACCAGTAACTTTTTTGCTCTTTACAAGCTTGTCTGTCAC
AGACACTAACAAGCATTTTGTCTTTCCAGGACATTTTATTTCAACCAGACATTTTTTCTG
TCACAAACAGTTTGTGCTTGTTACCAACATAATATGTCAGTTGACGACAAATAAACACAC
TATGTC

InterProScan

PIRSF
CCR4-NOT_su3/5 (IPR012270) - T[20-544] 6.2E-128 - T[470-734] 1.1E-83
Pfam
Not_N (IPR007207) - T[22-251] 9.5E-88
Gene3D
CCR4-NOT_su2/3/5_N_sf (IPR038635) - T[584-729] 9.3E-66
Pfam
NOT (IPR007282) - T[605-728] 7.4E-41

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CNOT3_HUMAN 68.182 % 341 2.45E-106