- Region 'REG00001304' >
- Transcript 'KH2012:KH.C1.455.v1....' >
- Transcript 'KH2012:KH.C1.455.v2....'
Transcript Model
Transcript Id
KH2012:KH.C1.455.v2.A.SL2-1
Possible name(s)
AFG3L2; SPG7; YME1L1
Gene model
Location
KhC1 [7,633,259 / 7,643,858]
Amino acid sequence
Length: 691
>KH.C1.455.v2.A.SL2-1
IISPLVEGGLHAARRLNSASKTANRKTKNEDTKVSVANPQSQLRIPFLPSYLERMMPYTS
FLSALREIQINLPKPHNASKISRIIHANLTHSSTMPWRTQHVRTFKTKRTVMEDEMSEQK
SSQKSGKTTVDKSAIDDNIQSMLKTYDLPTRTSTLLRLGVEEGIQLAKANEGKKSGFNFK
ADPLSFLLVFIFVILAFRLYKTVPGREFFRTADESGIITDVRFEDVCGMDEAKNELEDVV
DYLRDPDKFTQLGAKLPKGILLIGPPGTGKTLLAKAVAGESGVPFFYTAGSEFDEMFVGI
GASRIRKLFENARKQAPSIIFIDEIDACGSKRTNSSLQPYARQTINQLLQEMDGFTKKEP
VIVLGATNTGEVLDKALTRPGRFDTQVQVLLPDIQGRKDIFNLYIGKLDINIDNQLNLDK
LAALTIGMTGADISNIVNQAALRAAKLNKQRVDQDDLEYALDKAKMGPELKSRIRSESEL
RNTAHHEAGHALVAYYTPAAHTIYKATIRQRGPALGHVSLIPEKESEQSLSKAQIISMMD
VSMGGRVAEELLLGKEHVSTGASSDINNATESAYKLVCMYGMSEKLGLMTYDMQHLSQET
KRAVEIEVKKLLEKSYEKAKEMIVSKSYEHKLLAEALLRYETLTMDEIKILLDSKDINSI
ENMRLHTQQQKILQKSELEKLKDALAPGLLC
Nucleotide sequence
Length: 2,375
>KH2012:KH.C1.455.v2.A.SL2-1
ATAATTTCACCTCTTGTTGAAGGTGGGCTTCATGCTGCGAGGAGATTAAACTCAGCAAGC
AAAACAGCAAACAGGAAGACAAAAAATGAAGATACAAAAGTGTCAGTCGCAAATCCACAG
TCACAACTTCGAATTCCATTCCTGCCAAGTTATCTTGAGCGTATGATGCCATACACTTCC
TTCCTATCTGCACTGAGGGAAATTCAGATCAACCTTCCCAAACCCCATAATGCTAGCAAG
ATTTCCCGTATAATTCATGCCAACTTAACCCACAGCTCTACTATGCCATGGAGAACACAA
CATGTTCGAACTTTCAAAACCAAACGAACAGTAATGGAAGATGAAATGTCAGAACAAAAA
TCCTCACAGAAAAGTGGCAAAACAACCGTTGACAAATCAGCAATTGATGACAATATTCAA
AGTATGTTGAAAACTTATGATCTACCAACAAGGACTTCTACATTATTAAGACTTGGGGTG
GAAGAAGGAATACAGTTGGCTAAAGCTAATGAGGGAAAAAAATCCGGCTTCAATTTTAAA
GCTGACCCACTGTCGTTTTTGCTGGTATTCATTTTTGTGATTCTTGCTTTTCGTCTTTAT
AAAACTGTGCCAGGCCGAGAATTTTTCCGGACTGCTGATGAAAGCGGGATCATCACGGAT
GTTCGGTTCGAGGATGTTTGTGGGATGGATGAAGCGAAGAATGAACTCGAGGACGTTGTC
GATTATTTACGAGATCCTGATAAGTTTACGCAACTTGGGGCAAAACTTCCAAAAGGTATT
CTGTTGATTGGACCACCAGGTACAGGGAAGACATTGCTGGCAAAGGCAGTAGCAGGGGAG
TCTGGGGTTCCTTTCTTTTACACAGCTGGTTCTGAATTTGATGAAATGTTCGTTGGGATT
GGCGCTTCGCGTATTCGCAAGTTATTTGAAAACGCTCGTAAACAAGCCCCTTCCATTATT
TTCATCGATGAAATTGATGCTTGTGGCAGCAAGCGAACAAATTCATCTCTGCAACCCTAC
GCACGACAAACCATCAACCAATTACTGCAGGAAATGGACGGGTTCACGAAAAAAGAACCA
GTGATAGTCCTTGGGGCAACCAATACTGGTGAAGTCTTGGACAAAGCCTTGACCAGACCC
GGGAGGTTTGACACCCAAGTACAAGTGTTGTTACCTGATATACAAGGAAGAAAAGATATA
TTTAATCTCTATATTGGAAAGCTAGATATTAACATAGACAACCAGTTAAACCTTGACAAA
CTGGCAGCACTGACCATTGGAATGACAGGTGCTGACATAAGTAACATCGTCAACCAAGCT
GCACTTCGTGCTGCTAAGTTAAACAAGCAACGTGTGGACCAAGATGACCTGGAATATGCA
CTCGATAAAGCTAAGATGGGTCCGGAGTTAAAAAGTCGAATCCGATCAGAATCAGAGTTA
CGCAACACTGCCCACCATGAAGCTGGTCATGCCCTTGTAGCTTACTATACACCAGCTGCA
CACACAATATATAAAGCAACTATACGACAACGTGGGCCTGCTCTTGGCCATGTTTCTTTA
ATACCTGAGAAGGAAAGCGAACAAAGTTTGTCAAAAGCTCAAATCATATCAATGATGGAT
GTTTCTATGGGGGGCAGAGTAGCGGAAGAATTATTGCTTGGCAAGGAGCATGTGAGCACT
GGCGCATCTTCGGATATCAACAATGCAACAGAGTCAGCGTATAAACTCGTTTGTATGTAC
GGAATGTCAGAAAAGCTTGGCCTTATGACGTATGACATGCAACATTTAAGTCAGGAAACG
AAGAGAGCTGTTGAAATTGAAGTGAAAAAATTACTAGAAAAATCTTACGAAAAAGCGAAA
GAAATGATTGTCTCGAAATCTTACGAACACAAGCTGCTTGCCGAGGCATTGTTAAGATAC
GAAACATTAACGATGGATGAAATCAAAATTCTGCTCGATTCCAAAGACATTAATTCCATT
GAAAATATGCGCCTGCATACCCAGCAACAAAAAATTTTGCAAAAAAGTGAATTAGAAAAA
TTAAAAGACGCCTTAGCACCAGGCCTGCTGTGCTAATGTTTTGTTCAACTGTCTCAGCAA
CAAGGTAGACCGTTTTATTCAAACTGAATTTCAGCCACTTTGTTTATAACTGCAATTTAA
GTAGTCTTGCGTGTGTAAATACAATCTTATTATTTCGTTTTCTTTTTGAGGGAAATTTGA
ATCTGTAAATTCTTCATTTGCAAAACTGCGTTCATTTTCATTGGCAAAAAATAATCTTTA
TAATATTGATATTTCGAAATCTTCTTGTTTGCTTTGTGGTTAAGATTTTACTCGCCGATT
CCGCTATGTAATAAAACAATGAATGAATTCCGTTA
| TIGRFAM |
FtsH (IPR005936) - T[187-652] 1.1E-160 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[219-463] 1.09E-63 |
| SMART |
AAA+_ATPase (IPR003593) - T[256-393] 2.2E-23 |
| Pfam |
ATPase_AAA_core (IPR003959) - T[260-389] 1.5E-40 |
| ProSitePatterns |
ATPase_AAA_CS (IPR003960) - T[361-379] . |
| Pfam |
Peptidase_M41 (IPR000642) - T[454-649] 1.2E-54 |
| SUPERFAMILY |
Peptidase_M41-like (IPR037219) - T[475-657] 4.71E-53 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SPG7_HUMAN | 40.268 % | 320 | 1.74E-98 |
| AFG32_HUMAN | 41.556 % | 350 | 8.18E-110 |
| YMEL1_HUMAN | 49.907 % | 507 | 1.38E-170 |