- Region 'REG00001304' >
- Transcript 'KH2012:KH.C1.455.v1....'
Transcript Model
Transcript Id
KH2012:KH.C1.455.v1.A.SL1-1
Possible name(s)
AFG3L2; SPG7; YME1L1
Gene model
Location
KhC1 [7,633,259 / 7,644,445]
Amino acid sequence
Length: 719
>KH.C1.455.v1.A.SL1-1
NYKYKNGLQYKIRLTTEMLSSTTILNPQIISPLVEGGLHAARRLNSASKTANRKTKNEDT
KVSVANPQSQLRIPFLPSYLERMMPYTSFLSALREIQINLPKPHNASKISRIIHANLTHS
STMPWRTQHVRTFKTKRTVMEDEMSEQKSSQKSGKTTVDKSAIDDNIQSMLKTYDLPTRT
STLLRLGVEEGIQLAKANEGKKSGFNFKADPLSFLLVFIFVILAFRLYKTVPGREFFRTA
DESGIITDVRFEDVCGMDEAKNELEDVVDYLRDPDKFTQLGAKLPKGILLIGPPGTGKTL
LAKAVAGESGVPFFYTAGSEFDEMFVGIGASRIRKLFENARKQAPSIIFIDEIDACGSKR
TNSSLQPYARQTINQLLQEMDGFTKKEPVIVLGATNTGEVLDKALTRPGRFDTQVQVLLP
DIQGRKDIFNLYIGKLDINIDNQLNLDKLAALTIGMTGADISNIVNQAALRAAKLNKQRV
DQDDLEYALDKAKMGPELKSRIRSESELRNTAHHEAGHALVAYYTPAAHTIYKATIRQRG
PALGHVSLIPEKESEQSLSKAQIISMMDVSMGGRVAEELLLGKEHVSTGASSDINNATES
AYKLVCMYGMSEKLGLMTYDMQHLSQETKRAVEIEVKKLLEKSYEKAKEMIVSKSYEHKL
LAEALLRYETLTMDEIKILLDSKDINSIENMRLHTQQQKILQKSELEKLKDALAPGLLC
Nucleotide sequence
Length: 2,476
>KH2012:KH.C1.455.v1.A.SL1-1
ATTACTTTGTTGCTTAAAATTATAAGTACAAAAACGGGCTGCAATATAAAATAAGGTTAA
CCACAGAAATGCTTTCATCTACTACGATATTAAATCCTCAGATAATTTCACCTCTTGTTG
AAGGTGGGCTTCATGCTGCGAGGAGATTAAACTCAGCAAGCAAAACAGCAAACAGGAAGA
CAAAAAATGAAGATACAAAAGTGTCAGTCGCAAATCCACAGTCACAACTTCGAATTCCAT
TCCTGCCAAGTTATCTTGAGCGTATGATGCCATACACTTCCTTCCTATCTGCACTGAGGG
AAATTCAGATCAACCTTCCCAAACCCCATAATGCTAGCAAGATTTCCCGTATAATTCATG
CCAACTTAACCCACAGCTCTACTATGCCATGGAGAACACAACATGTTCGAACTTTCAAAA
CCAAACGAACAGTAATGGAAGATGAAATGTCAGAACAAAAATCCTCACAGAAAAGTGGCA
AAACAACCGTTGACAAATCAGCAATTGATGACAATATTCAAAGTATGTTGAAAACTTATG
ATCTACCAACAAGGACTTCTACATTATTAAGACTTGGGGTGGAAGAAGGAATACAGTTGG
CTAAAGCTAATGAGGGAAAAAAATCCGGCTTCAATTTTAAAGCTGACCCACTGTCGTTTT
TGCTGGTATTCATTTTTGTGATTCTTGCTTTTCGTCTTTATAAAACTGTGCCAGGCCGAG
AATTTTTCCGGACTGCTGATGAAAGCGGGATCATCACGGATGTTCGGTTCGAGGATGTTT
GTGGGATGGATGAAGCGAAGAATGAACTCGAGGACGTTGTCGATTATTTACGAGATCCTG
ATAAGTTTACGCAACTTGGGGCAAAACTTCCAAAAGGTATTCTGTTGATTGGACCACCAG
GTACAGGGAAGACATTGCTGGCAAAGGCAGTAGCAGGGGAGTCTGGGGTTCCTTTCTTTT
ACACAGCTGGTTCTGAATTTGATGAAATGTTCGTTGGGATTGGCGCTTCGCGTATTCGCA
AGTTATTTGAAAACGCTCGTAAACAAGCCCCTTCCATTATTTTCATCGATGAAATTGATG
CTTGTGGCAGCAAGCGAACAAATTCATCTCTGCAACCCTACGCACGACAAACCATCAACC
AATTACTGCAGGAAATGGACGGGTTCACGAAAAAAGAACCAGTGATAGTCCTTGGGGCAA
CCAATACTGGTGAAGTCTTGGACAAAGCCTTGACCAGACCCGGGAGGTTTGACACCCAAG
TACAAGTGTTGTTACCTGATATACAAGGAAGAAAAGATATATTTAATCTCTATATTGGAA
AGCTAGATATTAACATAGACAACCAGTTAAACCTTGACAAACTGGCAGCACTGACCATTG
GAATGACAGGTGCTGACATAAGTAACATCGTCAACCAAGCTGCACTTCGTGCTGCTAAGT
TAAACAAGCAACGTGTGGACCAAGATGACCTGGAATATGCACTCGATAAAGCTAAGATGG
GTCCGGAGTTAAAAAGTCGAATCCGATCAGAATCAGAGTTACGCAACACTGCCCACCATG
AAGCTGGTCATGCCCTTGTAGCTTACTATACACCAGCTGCACACACAATATATAAAGCAA
CTATACGACAACGTGGGCCTGCTCTTGGCCATGTTTCTTTAATACCTGAGAAGGAAAGCG
AACAAAGTTTGTCAAAAGCTCAAATCATATCAATGATGGATGTTTCTATGGGGGGCAGAG
TAGCGGAAGAATTATTGCTTGGCAAGGAGCATGTGAGCACTGGCGCATCTTCGGATATCA
ACAATGCAACAGAGTCAGCGTATAAACTCGTTTGTATGTACGGAATGTCAGAAAAGCTTG
GCCTTATGACGTATGACATGCAACATTTAAGTCAGGAAACGAAGAGAGCTGTTGAAATTG
AAGTGAAAAAATTACTAGAAAAATCTTACGAAAAAGCGAAAGAAATGATTGTCTCGAAAT
CTTACGAACACAAGCTGCTTGCCGAGGCATTGTTAAGATACGAAACATTAACGATGGATG
AAATCAAAATTCTGCTCGATTCCAAAGACATTAATTCCATTGAAAATATGCGCCTGCATA
CCCAGCAACAAAAAATTTTGCAAAAAAGTGAATTAGAAAAATTAAAAGACGCCTTAGCAC
CAGGCCTGCTGTGCTAATGTTTTGTTCAACTGTCTCAGCAACAAGGTAGACCGTTTTATT
CAAACTGAATTTCAGCCACTTTGTTTATAACTGCAATTTAAGTAGTCTTGCGTGTGTAAA
TACAATCTTATTATTTCGTTTTCTTTTTGAGGGAAATTTGAATCTGTAAATTCTTCATTT
GCAAAACTGCGTTCATTTTCATTGGCAAAAAATAATCTTTATAATATTGATATTTCGAAA
TCTTCTTGTTTGCTTTGTGGTTAAGATTTTACTCGCCGATTCCGCTATGTAATAAAACAA
TGAATGAATTCCGTTA
| TIGRFAM |
FtsH (IPR005936) - T[215-680] 1.2E-160 |
| SUPERFAMILY |
P-loop_NTPase (IPR027417) - T[247-491] 1.17E-63 |
| SMART |
AAA+_ATPase (IPR003593) - T[284-421] 2.2E-23 |
| Pfam |
ATPase_AAA_core (IPR003959) - T[288-417] 1.6E-40 |
| ProSitePatterns |
ATPase_AAA_CS (IPR003960) - T[389-407] . |
| Pfam |
Peptidase_M41 (IPR000642) - T[482-677] 1.1E-54 |
| SUPERFAMILY |
Peptidase_M41-like (IPR037219) - T[503-685] 5.1E-53 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SPG7_HUMAN | 40.268 % | 320 | 4.02E-98 |
| AFG32_HUMAN | 41.556 % | 350 | 2.32E-109 |
| YMEL1_HUMAN | 49.907 % | 506 | 4.27E-170 |