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  1. Transcript 'KH2012:KH.C14.506.v1...'

Transcript Model

Transcript Id

KH2012:KH.C14.506.v1.R.ND1-1

Possible name(s)

LIN54; TESMIN

Location

KhC14 [1,201,870 / 1,205,014]

Sequences

Amino acid sequence

Length: 607

>KH.C14.506.v1.R.ND1-1
IKMESFQNGPDIDSMLDRIEGEVKMESMSPDNAHDITDDAIETMLMEVDSQNSQTDSTTQ
QNLVPNSSIIQPTGLAGAAVSTQPIQVFTQQKVGNPIITKYVLKRPASASLSPSTQFTSV
SNQAKLPALQTVTVKGGNITLSPVKGGFKIPISPMKTSLKVSMIHPSHPTVHNTVSITNS
QSTANNPKFQFQTFISSAPTSNRIAVSNIQSNQQQTFVPVPQRIQIPGVKMPCVRLVPAN
GQNQTSGVTNYVTAHANELPPGTTLVQQQQQQPFVNIQPYQRTIQQQNKPHQRLIMPATA
SVTTNQQQSVANMSQGALLQAGNIGYAMVPAKYVEQLKKQLNTGSIVYSSESAATGSTDI
NPTIQSNTTQKVVMNGKIRKPCNCTKSMCLKLYCECFANGHFCDSCNCINCHNNLEFDTD
RSKAIKSCLERNPMAFRPKIGRGRDANRTHQKGCNCKRSGCLKNYCECYEARIPCTSKCK
CIGCKNLEEDSVALKEQHPLMNLADAAAVRCQQQAASKSRISTHIGEIRPTQRPQTYHSA
SGERLPYTFFTQEVIEATCTCLLAQAEEAEKTNRSSNQTEMMVLEEFGKCLMQIIQAAGK
AKSNPTT

Nucleotide sequence

Length: 3,144

>KH2012:KH.C14.506.v1.R.ND1-1
TTTAATTAAAATTAAAATTTAAAACAAACCTTGAATCAAGATGGAGTCATTTCAAAACGG
ACCAGACATTGACAGCATGCTTGACCGCATAGAAGGAGAAGTTAAAATGGAATCTATGAG
CCCTGACAATGCCCATGATATAACTGATGACGCCATTGAAACTATGTTAATGGAAGTGGA
TAGCCAAAATAGCCAAACTGATAGCACAACACAGCAAAATCTTGTTCCTAACTCTTCTAT
AATACAACCTACAGGCTTGGCTGGTGCTGCAGTTTCTACACAGCCTATACAGGTATTTAC
GCAGCAAAAAGTTGGTAACCCGATCATTACAAAGTATGTTTTAAAGCGTCCTGCAAGTGC
GAGCCTGAGTCCAAGCACACAGTTTACAAGTGTTTCTAATCAAGCAAAACTGCCAGCTCT
GCAAACAGTGACAGTTAAAGGCGGAAATATAACCCTATCACCTGTAAAAGGAGGATTTAA
GATTCCAATATCACCAATGAAAACATCTCTAAAAGTCTCAATGATACACCCATCTCACCC
AACAGTGCATAACACAGTAAGCATTACAAATTCCCAGTCCACAGCCAATAACCCAAAGTT
CCAATTCCAAACATTTATATCCTCTGCCCCAACCAGTAACAGGATAGCTGTCTCTAACAT
ACAGTCAAACCAGCAGCAAACTTTTGTACCAGTACCACAAAGAATTCAAATTCCTGGTGT
TAAGATGCCATGCGTGAGACTGGTTCCAGCAAATGGACAAAACCAAACCAGTGGCGTTAC
CAATTATGTAACAGCGCATGCAAATGAGCTACCTCCAGGTACAACTCTGGTTCAACAACA
GCAACAGCAGCCTTTTGTTAACATTCAGCCTTATCAGAGGACAATACAACAGCAAAATAA
ACCCCATCAAAGGCTTATAATGCCAGCCACTGCCTCTGTTACTACAAACCAGCAGCAGAG
TGTGGCTAACATGTCACAGGGGGCTTTGCTACAAGCAGGCAACATTGGCTATGCAATGGT
ACCTGCAAAGTATGTGGAACAGCTCAAAAAACAGCTCAATACTGGCTCCATTGTGTATAG
CTCAGAGTCTGCAGCAACTGGAAGCACGGATATAAATCCGACCATTCAGAGCAACACTAC
ACAGAAAGTAGTTATGAATGGTAAAATCCGTAAGCCATGTAACTGCACAAAATCTATGTG
TTTAAAGTTGTATTGCGAGTGCTTTGCAAACGGACACTTTTGCGATTCGTGCAACTGCAT
AAACTGCCATAACAACCTCGAATTCGATACCGACCGTTCAAAAGCAATAAAGTCCTGTTT
GGAAAGAAATCCTATGGCTTTTCGGCCGAAAATTGGCAGAGGCAGAGATGCAAATAGGAC
TCACCAAAAGGGCTGTAACTGCAAACGCTCAGGCTGCCTGAAAAACTACTGTGAATGTTA
CGAGGCCCGCATACCATGCACATCCAAGTGCAAGTGTATAGGATGTAAAAACCTGGAAGA
AGATAGTGTAGCTCTGAAAGAACAACATCCACTCATGAACTTAGCTGACGCTGCAGCTGT
ACGCTGCCAGCAACAAGCGGCCTCAAAAAGCAGAATAAGTACCCATATTGGGGAAATACG
GCCAACTCAGCGCCCACAGACGTACCACAGCGCCAGTGGAGAACGACTGCCTTATACATT
CTTTACCCAAGAGGTGATAGAAGCCACATGTACCTGCTTACTTGCCCAGGCAGAAGAGGC
AGAGAAAACTAACCGTTCCTCGAACCAAACTGAAATGATGGTTCTTGAGGAGTTTGGGAA
ATGTCTCATGCAAATTATTCAAGCCGCTGGTAAAGCAAAGTCAAATCCAACAACTTAGTT
TTGGTTTTTAAACGTTTTCATCATTTTCTTCCAACTTTCTGCCCAACTAGTAACATTCTT
TTTTCTATAGTAATGTGGGGGAAGATGGGACACCTTTAGCACATAATATCCAAATATCCT
GATCGTGTTTTAAACAGTTAATAACGGTCTATGGGAGTCGTTAGCATACGGTTTATAATT
CTTTGAATTTTTTTTGGATAAAAAAGAAAAAATGAAATGGGTGTCCCATCTTTCTCCAAC
CTTCTATATATATATATTATATATAAAGTAAAATTAGGAAACTGAATGTAGTCAAATAAG
GTGTTTATAACTTAATATCATAAACAATTTAACCAGATTTATTTCTTTTTCACAACATAC
TTGCACAAATTTTGACACATGTATAACTTGGTAAAAATACTAAAAATCATTTCACCGATT
TTTGGATTTTGATGCTTTATTTGTTTCCTTTTTGCTTTGGTTTCAGTGTATAAGAAATTT
TTGTTAGTTTATTAGTTGTTAGTTTTTTTTGATCATTGCATTGCTCTTAAAAAGGGCAGA
AGTTGTGTAGAAAATTTTACCGATTTTTACCATTTTCCGTCACCCCAACTGGCTTCATTT
TGTATACACACAGTGTAATTCATATGTGTTGCAAATATGACCTGTTATACCATGCTTTGA
AAGGAATAATATAGTATAAAAAAATGTAAAAATTATCAAAAGAAATTGTAATATTAAATT
TTAATTGGTTTAAAAAATAATTTTTGGTTGTATTTTTCCTCAAAAATCCCATTTAAAATC
TGTTTAAAATGAAGACTGTCATTAACATTGTAACTGTACCGATATTAAAACAACCTTTTT
CACATAAGATTTTCGTACTTCCAACAAAATGTCCATATATATATATATATATTTATGCTA
TTGGTTCCAGTGATATATGTTCAACTAGCAACAAAAGTCTTGCTGGTACATTTTTCTTAC
TTCAAATACCTCTCCATGATATATATATCTTTGTAAACGTTTCTTATTGAAGTATTGTAC
TTTTTAACACTTTCAGCATTGCTTATGCTTGAAATTTTAACCATTTACAAGCAAAAACTA
ATACAAAACAGATTTTTCACCGTTTTTTTATTAGAAAATAAAGTTATTTAGTAGTTGCTT
TATTTTGGTAAAAAGCCATTTTGAACAATGTTAAGCAATGTTGTAAGACTATGGAAAAAT
AAAACCATATTAAAGAAGGTTTTGATTTGTGTTAATGGTGATATAATGGATTGAGTAAAA
TAAATAGAGGTGATAACGCGTTTA

InterProScan

PANTHER
Lin-54_fam (IPR028307) - T[85-606] 4.9E-107
SMART
Tesmin/TSO1-like_CXC (IPR033467) - T[377-417] 4.5E-19 - T[449-490] 3.2E-19
ProSiteProfiles
CRC (IPR005172) - T[378-489] 33.209
Pfam
CRC (IPR005172) - T[380-414] 5.0E-12 - T[451-487] 1.8E-12

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
LIN54_HUMAN 44.966 % 338 6.43E-107
MTL5_HUMAN 50 % 179 2.02E-49