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  1. Transcript 'KH2012:KH.C14.506.v1...'

Transcript Model

Transcript Id

KH2012:KH.C14.506.v1.C.SL2-1

Possible name(s)

LIN54; TESMIN

Location

KhC14 [1,201,870 / 1,205,023]

Sequences

Amino acid sequence

Length: 607

>KH.C14.506.v1.C.SL2-1
IKMESFQNGPDIDSMLDRIEGEVKMESMSPDNAHDITDDAIETMLMEVDSQNSQTDSTTQ
QNLVPNSSIIQPTGLAGAAVSTQPIQVFTQQKVGNPIITKYVLKRPASASLSPSTQFTSV
SNQAKLPALQTVTVKGGNITLSPVKGGFKIPISPMKTSLKVSMIHPSHPTVHNTVSITNS
QSTANNPKFQFQTFISSAPTSNRIAVSNIQSNQQQTFVPVPQRIQIPGVKMPCVRLVPAN
GQNQTSGVTNYVTAHANELPPGTTLVQQQQQQPFVNIQPYQRTIQQQNKPHQRLIMPATA
SVTTNQQQSVANMSQGALLQAGNIGYAMVPAKYVEQLKKQLNTGSIVYSSESAATGSTDI
NPTIQSNTTQKVVMNGKIRKPCNCTKSMCLKLYCECFANGHFCDSCNCINCHNNLEFDTD
RSKAIKSCLERNPMAFRPKIGRGRDANRTHQKGCNCKRSGCLKNYCECYEARIPCTSKCK
CIGCKNLEEDSVALKEQHPLMNLADAAAVRCQQQAASKSRISTHIGEIRPTQRPQTYHSA
SGERLPYTFFTQEVIEATCTCLLAQAEEAEKTNRSSNQTEMMVLEEFGKCLMQIIQAAGK
AKSNPTT

Nucleotide sequence

Length: 3,153

>KH2012:KH.C14.506.v1.C.SL2-1
AATGTTGGTTTTAATTAAAATTAAAATTTAAAACAAACCTTGAATCAAGATGGAGTCATT
TCAAAACGGACCAGACATTGACAGCATGCTTGACCGCATAGAAGGAGAAGTTAAAATGGA
ATCTATGAGCCCTGACAATGCCCATGATATAACTGATGACGCCATTGAAACTATGTTAAT
GGAAGTGGATAGCCAAAATAGCCAAACTGATAGCACAACACAGCAAAATCTTGTTCCTAA
CTCTTCTATAATACAACCTACAGGCTTGGCTGGTGCTGCAGTTTCTACACAGCCTATACA
GGTATTTACGCAGCAAAAAGTTGGTAACCCGATCATTACAAAGTATGTTTTAAAGCGTCC
TGCAAGTGCGAGCCTGAGTCCAAGCACACAGTTTACAAGTGTTTCTAATCAAGCAAAACT
GCCAGCTCTGCAAACAGTGACAGTTAAAGGCGGAAATATAACCCTATCACCTGTAAAAGG
AGGATTTAAGATTCCAATATCACCAATGAAAACATCTCTAAAAGTCTCAATGATACACCC
ATCTCACCCAACAGTGCATAACACAGTAAGCATTACAAATTCCCAGTCCACAGCCAATAA
CCCAAAGTTCCAATTCCAAACATTTATATCCTCTGCCCCAACCAGTAACAGGATAGCTGT
CTCTAACATACAGTCAAACCAGCAGCAAACTTTTGTACCAGTACCACAAAGAATTCAAAT
TCCTGGTGTTAAGATGCCATGCGTGAGACTGGTTCCAGCAAATGGACAAAACCAAACCAG
TGGCGTTACCAATTATGTAACAGCGCATGCAAATGAGCTACCTCCAGGTACAACTCTGGT
TCAACAACAGCAACAGCAGCCTTTTGTTAACATTCAGCCTTATCAGAGGACAATACAACA
GCAAAATAAACCCCATCAAAGGCTTATAATGCCAGCCACTGCCTCTGTTACTACAAACCA
GCAGCAGAGTGTGGCTAACATGTCACAGGGGGCTTTGCTACAAGCAGGCAACATTGGCTA
TGCAATGGTACCTGCAAAGTATGTGGAACAGCTCAAAAAACAGCTCAATACTGGCTCCAT
TGTGTATAGCTCAGAGTCTGCAGCAACTGGAAGCACGGATATAAATCCGACCATTCAGAG
CAACACTACACAGAAAGTAGTTATGAATGGTAAAATCCGTAAGCCATGTAACTGCACAAA
ATCTATGTGTTTAAAGTTGTATTGCGAGTGCTTTGCAAACGGACACTTTTGCGATTCGTG
CAACTGCATAAACTGCCATAACAACCTCGAATTCGATACCGACCGTTCAAAAGCAATAAA
GTCCTGTTTGGAAAGAAATCCTATGGCTTTTCGGCCGAAAATTGGCAGAGGCAGAGATGC
AAATAGGACTCACCAAAAGGGCTGTAACTGCAAACGCTCAGGCTGCCTGAAAAACTACTG
TGAATGTTACGAGGCCCGCATACCATGCACATCCAAGTGCAAGTGTATAGGATGTAAAAA
CCTGGAAGAAGATAGTGTAGCTCTGAAAGAACAACATCCACTCATGAACTTAGCTGACGC
TGCAGCTGTACGCTGCCAGCAACAAGCGGCCTCAAAAAGCAGAATAAGTACCCATATTGG
GGAAATACGGCCAACTCAGCGCCCACAGACGTACCACAGCGCCAGTGGAGAACGACTGCC
TTATACATTCTTTACCCAAGAGGTGATAGAAGCCACATGTACCTGCTTACTTGCCCAGGC
AGAAGAGGCAGAGAAAACTAACCGTTCCTCGAACCAAACTGAAATGATGGTTCTTGAGGA
GTTTGGGAAATGTCTCATGCAAATTATTCAAGCCGCTGGTAAAGCAAAGTCAAATCCAAC
AACTTAGTTTTGGTTTTTAAACGTTTTCATCATTTTCTTCCAACTTTCTGCCCAACTAGT
AACATTCTTTTTTCTATAGTAATGTGGGGGAAGATGGGACACCTTTAGCACATAATATCC
AAATATCCTGATCGTGTTTTAAACAGTTAATAACGGTCTATGGGAGTCGTTAGCATACGG
TTTATAATTCTTTGAATTTTTTTTGGATAAAAAAGAAAAAATGAAATGGGTGTCCCATCT
TTCTCCAACCTTCTATATATATATATTATATATAAAGTAAAATTAGGAAACTGAATGTAG
TCAAATAAGGTGTTTATAACTTAATATCATAAACAATTTAACCAGATTTATTTCTTTTTC
ACAACATACTTGCACAAATTTTGACACATGTATAACTTGGTAAAAATACTAAAAATCATT
TCACCGATTTTTGGATTTTGATGCTTTATTTGTTTCCTTTTTGCTTTGGTTTCAGTGTAT
AAGAAATTTTTGTTAGTTTATTAGTTGTTAGTTTTTTTTGATCATTGCATTGCTCTTAAA
AAGGGCAGAAGTTGTGTAGAAAATTTTACCGATTTTTACCATTTTCCGTCACCCCAACTG
GCTTCATTTTGTATACACACAGTGTAATTCATATGTGTTGCAAATATGACCTGTTATACC
ATGCTTTGAAAGGAATAATATAGTATAAAAAAATGTAAAAATTATCAAAAGAAATTGTAA
TATTAAATTTTAATTGGTTTAAAAAATAATTTTTGGTTGTATTTTTCCTCAAAAATCCCA
TTTAAAATCTGTTTAAAATGAAGACTGTCATTAACATTGTAACTGTACCGATATTAAAAC
AACCTTTTTCACATAAGATTTTCGTACTTCCAACAAAATGTCCATATATATATATATATA
TTTATGCTATTGGTTCCAGTGATATATGTTCAACTAGCAACAAAAGTCTTGCTGGTACAT
TTTTCTTACTTCAAATACCTCTCCATGATATATATATCTTTGTAAACGTTTCTTATTGAA
GTATTGTACTTTTTAACACTTTCAGCATTGCTTATGCTTGAAATTTTAACCATTTACAAG
CAAAAACTAATACAAAACAGATTTTTCACCGTTTTTTTATTAGAAAATAAAGTTATTTAG
TAGTTGCTTTATTTTGGTAAAAAGCCATTTTGAACAATGTTAAGCAATGTTGTAAGACTA
TGGAAAAATAAAACCATATTAAAGAAGGTTTTGATTTGTGTTAATGGTGATATAATGGAT
TGAGTAAAATAAATAGAGGTGATAACGCGTTTA

InterProScan

PANTHER
Lin-54_fam (IPR028307) - T[85-606] 4.9E-107
SMART
Tesmin/TSO1-like_CXC (IPR033467) - T[377-417] 4.5E-19 - T[449-490] 3.2E-19
ProSiteProfiles
CRC (IPR005172) - T[378-489] 33.209
Pfam
CRC (IPR005172) - T[380-414] 5.0E-12 - T[451-487] 1.8E-12

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
LIN54_HUMAN 44.966 % 338 6.43E-107
MTL5_HUMAN 50 % 179 2.02E-49