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TRANSCRIPT CARD

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  1. EST 'AHC0AAA223YN15_RM1'
  2. Transcript 'Boleac.CG.SB_v3.S19....'
  3. Transcript 'KH2012:KH.C5.392.v1....'
  4. EST 'AHC0AAA232YC11_RM1'
  5. Transcript 'KH2012:KH.C14.5.v1.A...'

Transcript Model

Transcript Id

KH2012:KH.C14.5.v1.A.ND1-1

Possible name(s)

SLC25A13; SLC25A18; SLC25A22

Location

KhC14 [3,256,104 / 3,262,261]

Sequences

Amino acid sequence

Length: 285

>KH.C14.5.v1.A.ND1-1
TGNGCIAGFAGIVATFPLDLCKTRLQNQPVQNGVRMYNGLWHCIIEVQRKEGLRGLYRGS
LPNLICIMPEKAIKLGMNDYVRGFYHDGSSIKLRHEILAGAVAGLCQSVITIPMEMFKIS
GQDATRVNSGAVVSYRNTLQIVRQTRGLSGIYSGGLATWLRDIPFSMIYFPLYSYLTKVL
WQKDSQKAPFWVNLVSAMTAAGFAAVAVNPFDVIKTRLQSIHHSRKYTGIVDCGRSIYKE
EGFKSFFRGSAPRCMAIAPLFGIAQSVYRLGVCQGILGIPHNPHV

Nucleotide sequence

Length: 1,355

>KH2012:KH.C14.5.v1.A.ND1-1
ACTGGAAATGGATGTATTGCTGGATTTGCTGGCATTGTTGCCACTTTTCCGTTGGATCTT
TGCAAAACACGACTTCAAAATCAACCAGTGCAAAATGGAGTTCGCATGTATAATGGCCTG
TGGCACTGTATAATAGAGGTGCAGCGCAAGGAGGGCTTGAGAGGTTTATACAGAGGTTCT
TTGCCAAATCTTATCTGCATAATGCCTGAGAAAGCAATAAAGTTGGGGATGAATGATTAT
GTCCGTGGTTTCTATCATGATGGGAGCTCTATTAAGCTAAGACATGAGATTCTAGCTGGT
GCGGTTGCTGGTTTATGCCAGTCTGTCATCACCATTCCAATGGAGATGTTCAAAATATCT
GGACAAGATGCAACAAGAGTAAATTCAGGGGCAGTGGTATCTTATCGTAACACGCTACAA
ATTGTACGCCAGACTCGTGGTCTCTCTGGTATATACTCTGGTGGTCTTGCAACATGGCTA
AGGGACATCCCATTCTCTATGATCTACTTTCCATTGTATTCCTATCTCACCAAAGTGTTG
TGGCAAAAAGACTCACAGAAAGCTCCTTTCTGGGTTAACCTTGTGTCTGCCATGACAGCA
GCGGGCTTTGCAGCTGTGGCTGTTAATCCATTTGATGTTATAAAGACAAGACTCCAATCA
ATCCATCACTCGCGTAAATACACTGGTATTGTTGACTGTGGAAGGAGCATCTACAAAGAA
GAAGGTTTCAAATCATTTTTCCGTGGTTCTGCTCCTCGCTGCATGGCTATTGCTCCACTT
TTCGGGATCGCTCAATCAGTTTATAGACTCGGTGTGTGCCAAGGAATTTTAGGAATACCT
CACAATCCACATGTGTGATAACCAATCCTGCTCTATCAGTGTTGTATTTTAAATTATTTT
AGGCCTAGGATTTCTTGCTTTGCGTGACTGATTTTGAAAGTTCCATTTTAAATCTGTGAT
ACGTATTTCTACCTAGCTGTGACAGCAAACCTGCTGTGAAACATAATGCTAACCCAAATT
TTCATCAAAATTTATTTTTTTGTATTTTCTCTTACGTACTTGAGATGCATGCTTCACAGA
AAAATGCTGCAAGGGCAAAAAATGCTGCAAAATGTGCCATTTTACCATCTAATCTTGTAC
ATAATCAGTTCCAAAATACGTTCTACATGGTTGCGAAACATTGTTCCTTTCTGGTATGTA
AAAAAACTACATATTATTACCAAATCTTACTAAACTTATCAGAGCTTAAAACGTGCAATA
AAGGATTTGCATTGTGGTTTTCTATGGTACATGTCTTTTCACTGCATGGTGTTCGAAATT
GCGATAATTGTAGTAAAATAAATGTGCTGTTTGCC

InterProScan

Gene3D
Mt_carrier_dom_sf (IPR023395) - T[2-272] 1.1E-69
ProSiteProfiles
Mitochondrial_sb/sol_carrier (IPR018108) - T[2-84] 22.148 - T[91-179] 14.597 - T[188-274] 20.711
Pfam
Mitochondrial_sb/sol_carrier (IPR018108) - T[4-86] 2.5E-21 - T[91-182] 8.9E-13 - T[187-268] 3.4E-20
SUPERFAMILY
Mt_carrier_dom_sf (IPR023395) - T[4-268] 2.75E-69
PRINTS
Mit_carrier (IPR002067) - T[13-27] 6.3E-7 - T[59-79] 6.3E-7 - T[152-170] 6.3E-7 - T[197-219] 6.3E-7

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CMC2_HUMAN 43.636 % 198 7.24E-59
GHC1_HUMAN 43.73 % 242 4.78E-79
GHC2_HUMAN 43.709 % 234 3.6E-76