- Transcript 'KH2012:KH.C1.448.v4....'
Transcript Model
Transcript Id
KH2012:KH.C1.448.v4.A.ND6-1
Possible name(s)
RAP1GAP; RAP1GAP2; SIPA1L3
Gene model
Location
KhC1 [5,158,017 / 5,167,875]
Amino acid sequence
Length: 867
>KH.C1.448.v4.A.ND6-1
NLESDLPLDIKGPVTAVWKSLQFKSKSTSQLPSPCRGLRSHRNCPGQECDNLVFTYKQDN
LKRNRSSSQFDSSPVCNRLRNRRAAVSSGTTEDLGEISPGIADFVELDENEMPVKKNTLR
ITARFIGSLQKHSTQRVKAEKAAAAAALATLLTDPIRKESDGGILCEPCSEDDSNSKVSD
ANKADDLFAMLEKMQGTRMDEQRCSFHITPTPEIQPDAPTPLYPSINDILRRGPPFAQVI
PPPQGGYWAQGFHAQSRHVTSDPRTLKPTQTPVSCRLQRDEVTTAYRDHFVGKEHVNIYA
YDYNSENIGSIIMSVKYESVAEGSDLGQHRVLLRCRHASWTKCFPVVPESGGPVQWAKSM
CEDITVDRFYPIVCPNVWQSIIQFDEHCVNSSHKFGVLYQKARQTKEEEVFGNCEESPAF
KEFLDFLGDNVDLQGFGGFRGGLDVNHGHTGQTSVHSHFLDQEVMFHVSTKLPYVEGDRQ
QLQRKRHIGNDIVALVFQDDETPFVPNMITSHFLHAYIVIQPIDPCTENCRYKVSVTCRE
DVPEFEPLLPEPAVFGRNEQFRDWLYCKLMNAEWACCKSEQFAKLQYRTRSMLLDQLHDE
VNKGTELMLGLTSQSGGDNISTSSASSDTQKEAIGFYETFKKLAKNKSFDDVNGSPTLHH
GKGSSDKLVSEKKWGFKKKQNGSFNVIGSKGDTHASHTVQDSGHASDVALHKSNQGSVNS
LNESPQKNRQLRSSSPCQSCGSYTSLDSDTGLESIASSSRTDSWPRPNKHTALKKSNSST
ERHSAAIIENGAAEDNANEVNEMKTELKKLKLEKSDFSAQQQEILRLRDEVKRLKDKDST
HKKTDINSNPTLRALAATVATTEEHLV
Nucleotide sequence
Length: 3,155
>KH2012:KH.C1.448.v4.A.ND6-1
ACAACTTGGAGTCGGATTTACCGCTGGATATCAAAGGACCAGTCACAGCAGTGTGGAAAA
GTCTGCAATTCAAGTCAAAATCGACAAGTCAGCTGCCCAGCCCTTGTCGGGGATTGCGCA
GTCACCGGAACTGTCCAGGGCAGGAGTGCGATAACCTGGTGTTCACTTACAAGCAAGACA
ATTTAAAACGAAACCGAAGCTCTAGTCAGTTCGACAGCAGTCCAGTTTGCAACCGACTTC
GCAACAGGCGGGCAGCTGTTTCATCCGGTACAACAGAAGATCTCGGAGAAATCTCACCAG
GAATCGCTGATTTCGTGGAACTTGACGAAAACGAGATGCCTGTCAAGAAAAACACCTTAA
GAATTACTGCTAGGTTTATCGGATCGCTTCAGAAACATTCGACTCAAAGAGTGAAGGCTG
AAAAAGCAGCCGCGGCCGCCGCTTTGGCTACATTGTTGACAGATCCTATCAGAAAAGAGT
CTGATGGAGGTATATTATGCGAACCATGTTCTGAAGATGACAGCAACAGCAAAGTTTCAG
ATGCAAACAAGGCCGATGACCTCTTTGCAATGTTGGAAAAAATGCAGGGCACGCGAATGG
ACGAACAAAGATGTTCTTTTCACATCACACCGACTCCTGAAATTCAGCCGGACGCACCGA
CTCCATTGTACCCATCCATCAACGATATCCTTCGACGAGGTCCCCCTTTCGCCCAAGTAA
TTCCTCCACCCCAAGGCGGGTATTGGGCGCAAGGGTTTCACGCTCAATCTCGCCACGTCA
CCTCTGACCCCCGCACCTTAAAACCCACCCAAACCCCAGTCAGTTGTCGTTTACAACGTG
ATGAAGTGACGACGGCGTACCGAGACCACTTTGTTGGAAAGGAGCATGTCAACATATATG
CGTATGATTATAACAGCGAGAACATCGGTTCGATCATTATGTCGGTGAAATATGAAAGTG
TCGCTGAAGGAAGCGACCTTGGTCAACACAGAGTCTTATTAAGATGTCGCCACGCTTCGT
GGACAAAATGTTTTCCTGTTGTTCCCGAGAGTGGTGGGCCTGTACAGTGGGCTAAGAGCA
TGTGCGAAGATATCACTGTAGATCGGTTTTACCCAATCGTTTGCCCGAACGTGTGGCAAT
CAATCATACAGTTCGACGAGCATTGTGTCAACTCATCACATAAATTCGGAGTGCTTTACC
AGAAAGCAAGGCAAACCAAAGAAGAAGAAGTGTTCGGGAATTGTGAGGAAAGTCCTGCCT
TTAAAGAGTTTCTTGACTTCTTGGGAGATAACGTTGACCTGCAGGGTTTCGGTGGTTTCC
GCGGTGGTCTTGACGTCAACCACGGCCACACTGGCCAAACCTCGGTACACAGTCACTTCC
TCGATCAGGAGGTTATGTTCCACGTATCTACCAAGCTTCCATACGTCGAAGGTGACAGAC
AGCAGTTGCAACGTAAGCGTCACATCGGTAATGACATAGTGGCTCTTGTGTTCCAAGATG
ACGAAACTCCCTTTGTCCCAAACATGATTACGTCTCACTTTCTACATGCGTACATCGTCA
TTCAACCTATTGATCCATGCACTGAAAACTGCAGATACAAGGTATCCGTGACGTGTCGTG
AGGATGTGCCAGAGTTTGAACCACTGTTGCCTGAACCTGCTGTATTTGGACGGAACGAAC
AATTCCGTGACTGGCTCTATTGTAAACTTATGAATGCTGAATGGGCTTGTTGCAAGTCTG
AACAATTCGCAAAACTTCAGTACAGAACTCGTTCGATGCTGTTGGACCAACTTCATGATG
AAGTAAACAAAGGCACCGAGTTGATGTTGGGACTGACATCTCAGTCCGGAGGAGACAACA
TCAGCACTTCGTCTGCATCATCGGATACACAGAAGGAAGCAATCGGATTTTACGAAACTT
TTAAAAAATTGGCCAAAAATAAATCGTTTGACGATGTCAATGGTAGCCCAACATTACACC
ACGGCAAAGGAAGCTCAGATAAACTAGTTTCTGAAAAGAAATGGGGTTTCAAAAAGAAAC
AAAATGGCAGTTTCAATGTAATTGGATCGAAAGGAGACACACATGCGAGCCACACTGTAC
AAGACAGTGGTCATGCGTCAGACGTTGCGCTTCACAAATCCAACCAAGGTAGTGTGAACT
CACTCAACGAATCTCCACAGAAAAATAGACAACTCCGATCGTCTTCGCCCTGTCAATCGT
GTGGAAGTTACACAAGTTTAGATTCAGATACTGGTCTGGAAAGCATCGCGTCATCGTCAA
GAACCGACTCCTGGCCACGACCCAACAAACATACAGCGCTCAAGAAATCGAACAGTAGCA
CAGAACGACACAGTGCTGCCATAATAGAAAATGGGGCGGCAGAAGACAATGCAAATGAAG
TTAATGAAATGAAGACTGAATTGAAAAAATTAAAACTTGAAAAGAGTGATTTCAGTGCGC
AGCAACAGGAAATACTCCGACTTCGAGATGAAGTGAAACGACTTAAAGATAAAGATTCCA
CCCACAAGAAAACTGATATTAATTCAAACCCGACTTTACGAGCTCTCGCCGCAACTGTTG
CCACTACCGAAGAACATTTGGTGTGACGTCATGATTCAAATCAGTATGACGTGTAAACTA
CGTCATATTAACAAACCAACAACGTTCGCAAGCCAAGAGTGTTGGACTTAACTTGATCAA
CTTTTATCGACTTGCGGATCGGACCACAACAAACAAAGAGAAGAAAAACTCTTCCTTTTG
TCTTCATCGAGTCATTTGCGTTATCTGACGTCGTTTTGTCCACGTACTTTTGACTGTGAA
TCATGTAAACTGAATAGTAATTATATATTAATGATAACTGTATTGTTTATATTCCGTTGT
CTGCCGTTGCTCGCTGTCTCCCTCAAGAACGTCTCCCTTTCATATTTTATACATTTTGTT
ATTTAAACTGCTTATGTTGTACCTGATATGAGAGTTCAGTTTGCACGGCAAATCGTTCCT
ATGTTTCCTTTTTGTAAAAGAATATATTTGAAAATGTGGGTGTAGATTTCTACTGCATTT
TCATCGCTGCTCACTTACATGGCTCACAACAGTATTCTATTTTCTTTTTTTACCGTACAA
GCCGCGTATGGGCGTTAATAAATCAACAAAACAGA
| SMART |
GoLoco_motif (IPR003109) - T[184-206] 5.3E-8 |
| ProSiteProfiles |
GoLoco_motif (IPR003109) - T[184-206] 10.256 |
| Pfam |
GoLoco_motif (IPR003109) - T[185-206] 5.0E-9 |
| SUPERFAMILY |
Rap/Ran-GAP_sf (IPR035974) - T[281-606] 8.37E-102 |
| ProSiteProfiles |
Rap_GAP_dom (IPR000331) - T[381-597] 68.936 |
| Gene3D |
Rap/Ran-GAP_sf (IPR035974) - T[389-578] 9.1E-76 |
| Pfam |
Rap_GAP_dom (IPR000331) - T[410-590] 1.8E-60 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SI1L3_HUMAN | 36.111 % | 229 | 3.12E-62 |
| RPGP1_HUMAN | 40.895 % | 422 | 7.52E-137 |
| RPGP2_HUMAN | 47.835 % | 424 | 5.63E-137 |