- Transcript 'KH2012:KH.C1.448.v2....'
Transcript Model
Transcript Id
KH2012:KH.C1.448.v2.A.SL5-1
Possible name(s)
RAP1GAP; RAP1GAP2; SIPA1L3
Gene model
Location
KhC1 [5,158,017 / 5,193,524]
Amino acid sequence
Length: 889
>KH.C1.448.v2.A.SL5-1
LNNLPLDYCSNRRKSFETNTSSKKNILQKAAGILDRSDFLRRLSPDRRRSPKTSTENLTE
QKESPTDMTSVASNNQSPFVRNFLRKSNMDGAHAEEKSASADEKDKQQKKFSPRRSLRKL
KPRKTSAGERKSPPYVRTSNDNLTTQSKCHGCGFVLETGSDPHMSINGVHYHKDCFKCRK
CDASLTLKTARKESDGGILCEPCSEDDSNSKVSDANKGTRMDEQRCSFHITPTPEIQPDA
PTPLYPSINDILRRGPPFAQVIPPPQGGYWAQGFHAQSRHVTSDPRTLKPTQTPVSCRLQ
RDEVTTAYRDHFVGKEHVNIYAYDYNSENIGSIIMSVKYESVAEGSDLGQHRVLLRCRHA
SWTKCFPVVPESGGPVQWAKSMCEDITVDRFYPIVCPNVWQSIIQFDEHCVNSSHKFGVL
YQKARQTKEEEVFGNCEESPAFKEFLDFLGDNVDLQGFGGFRGGLDVNHGHTGQTSVHSH
FLDQEVMFHVSTKLPYVEGDRQQLQRKRHIGNDIVALVFQDDETPFVPNMITSHFLHAYI
VIQPIDPCTENCRYKVSVTCREDVPEFEPLLPEPAVFGRNEQFRDWLYCKLMNAEWACCK
SEQFAKLQYRTRSMLLDQLHDEVNKGTELMLGLTSQSGGDNISTSSASSDTQKEAIGFYE
TFKKLAKNKSFDDVNGSPTLHHGKGSSDKLVSEKKWGFKKKQNGSFNVIGSKGDTHASHT
VQDSGHASDVALHKSNQGSVNSLNESPQKNRQLRSSSPCQSCGSYTSLDSDTGLESIASS
SRTDSWPRPNKHTALKKSNSSTERHSAAIIENGAAEDNANEVNEMKTELKKLKLEKSDFS
AQQQEILRLRDEVKRLKDKDSTHKKTDINSNPTLRALAATVATTEEHLV
Nucleotide sequence
Length: 3,236
>KH2012:KH.C1.448.v2.A.SL5-1
CTTTTTTTTAAAACTAATTGAACAACTTGCCATTGGATTATTGCAGCAATCGTCGCAAGT
CTTTCGAAACCAACACAAGCTCCAAGAAAAATATTCTTCAGAAAGCAGCTGGAATTCTTG
ACCGAAGTGACTTCCTACGTCGGTTGTCACCTGACCGTAGAAGATCTCCCAAAACAAGCA
CGGAGAATTTAACGGAGCAGAAAGAAAGTCCAACAGACATGACATCTGTGGCGTCCAACA
ACCAATCTCCTTTCGTGAGAAACTTTCTGCGTAAAAGTAACATGGATGGTGCGCATGCAG
AAGAGAAGTCGGCGTCTGCTGACGAGAAGGATAAACAACAAAAGAAGTTTTCTCCGAGAA
GAAGTTTACGAAAACTTAAACCTAGGAAGACAAGCGCTGGCGAGCGAAAGTCGCCACCTT
ATGTTCGTACATCAAATGACAATCTTACGACGCAGAGCAAATGTCATGGATGTGGGTTTG
TGTTGGAGACAGGATCCGATCCTCACATGTCAATCAACGGTGTTCACTACCATAAGGATT
GCTTCAAATGTCGAAAATGCGACGCTTCACTCACGTTAAAGACCGCCCGAAAAGAGTCTG
ATGGAGGTATATTATGCGAACCATGTTCTGAAGATGACAGCAACAGCAAAGTTTCAGATG
CAAACAAGGGCACGCGAATGGACGAACAAAGATGTTCTTTTCACATCACACCGACTCCTG
AAATTCAGCCGGACGCACCGACTCCATTGTACCCATCCATCAACGATATCCTTCGACGAG
GTCCCCCTTTCGCCCAAGTAATTCCTCCACCCCAAGGCGGGTATTGGGCGCAAGGGTTTC
ACGCTCAATCTCGCCACGTCACCTCTGACCCCCGCACCTTAAAACCCACCCAAACCCCAG
TCAGTTGTCGTTTACAACGTGATGAAGTGACGACGGCGTACCGAGACCACTTTGTTGGAA
AGGAGCATGTCAACATATATGCGTATGATTATAACAGCGAGAACATCGGTTCGATCATTA
TGTCGGTGAAATATGAAAGTGTCGCTGAAGGAAGCGACCTTGGTCAACACAGAGTCTTAT
TAAGATGTCGCCACGCTTCGTGGACAAAATGTTTTCCTGTTGTTCCCGAGAGTGGTGGGC
CTGTACAGTGGGCTAAGAGCATGTGCGAAGATATCACTGTAGATCGGTTTTACCCAATCG
TTTGCCCGAACGTGTGGCAATCAATCATACAGTTCGACGAGCATTGTGTCAACTCATCAC
ATAAATTCGGAGTGCTTTACCAGAAAGCAAGGCAAACCAAAGAAGAAGAAGTGTTCGGGA
ATTGTGAGGAAAGTCCTGCCTTTAAAGAGTTTCTTGACTTCTTGGGAGATAACGTTGACC
TGCAGGGTTTCGGTGGTTTCCGCGGTGGTCTTGACGTCAACCACGGCCACACTGGCCAAA
CCTCGGTACACAGTCACTTCCTCGATCAGGAGGTTATGTTCCACGTATCTACCAAGCTTC
CATACGTCGAAGGTGACAGACAGCAGTTGCAACGTAAGCGTCACATCGGTAATGACATAG
TGGCTCTTGTGTTCCAAGATGACGAAACTCCCTTTGTCCCAAACATGATTACGTCTCACT
TTCTACATGCGTACATCGTCATTCAACCTATTGATCCATGCACTGAAAACTGCAGATACA
AGGTATCCGTGACGTGTCGTGAGGATGTGCCAGAGTTTGAACCACTGTTGCCTGAACCTG
CTGTATTTGGACGGAACGAACAATTCCGTGACTGGCTCTATTGTAAACTTATGAATGCTG
AATGGGCTTGTTGCAAGTCTGAACAATTCGCAAAACTTCAGTACAGAACTCGTTCGATGC
TGTTGGACCAACTTCATGATGAAGTAAACAAAGGCACCGAGTTGATGTTGGGACTGACAT
CTCAGTCCGGAGGAGACAACATCAGCACTTCGTCTGCATCATCGGATACACAGAAGGAAG
CAATCGGATTTTACGAAACTTTTAAAAAATTGGCCAAAAATAAATCGTTTGACGATGTCA
ATGGTAGCCCAACATTACACCACGGCAAAGGAAGCTCAGATAAACTAGTTTCTGAAAAGA
AATGGGGTTTCAAAAAGAAACAAAATGGCAGTTTCAATGTAATTGGATCGAAAGGAGACA
CACATGCGAGCCACACTGTACAAGACAGTGGTCATGCGTCAGACGTTGCGCTTCACAAAT
CCAACCAAGGTAGTGTGAACTCACTCAACGAATCTCCACAGAAAAATAGACAACTCCGAT
CGTCTTCGCCCTGTCAATCGTGTGGAAGTTACACAAGTTTAGATTCAGATACTGGTCTGG
AAAGCATCGCGTCATCGTCAAGAACCGACTCCTGGCCACGACCCAACAAACATACAGCGC
TCAAGAAATCGAACAGTAGCACAGAACGACACAGTGCTGCCATAATAGAAAATGGGGCGG
CAGAAGACAATGCAAATGAAGTTAATGAAATGAAGACTGAATTGAAAAAATTAAAACTTG
AAAAGAGTGATTTCAGTGCGCAGCAACAGGAAATACTCCGACTTCGAGATGAAGTGAAAC
GACTTAAAGATAAAGATTCCACCCACAAGAAAACTGATATTAATTCAAACCCGACTTTAC
GAGCTCTCGCCGCAACTGTTGCCACTACCGAAGAACATTTGGTGTGACGTCATGATTCAA
ATCAGTATGACGTGTAAACTACGTCATATTAACAAACCAACAACGTTCGCAAGCCAAGAG
TGTTGGACTTAACTTGATCAACTTTTATCGACTTGCGGATCGGACCACAACAAACAAAGA
GAAGAAAAACTCTTCCTTTTGTCTTCATCGAGTCATTTGCGTTATCTGACGTCGTTTTGT
CCACGTACTTTTGACTGTGAATCATGTAAACTGAATAGTAATTATATATTAATGATAACT
GTATTGTTTATATTCCGTTGTCTGCCGTTGCTCGCTGTCTCCCTCAAGAACGTCTCCCTT
TCATATTTTATACATTTTGTTATTTAAACTGCTTATGTTGTACCTGATATGAGAGTTCAG
TTTGCACGGCAAATCGTTCCTATGTTTCCTTTTTGTAAAAGAATATATTTGAAAATGTGG
GTGTAGATTTCTACTGCATTTTCATCGCTGCTCACTTACATGGCTCACAACAGTATTCTA
TTTTCTTTTTTTACCGTACAAGCCGCGTATGGGCGTTAATAAATCAACAAAACAGA
| ProSiteProfiles |
Znf_LIM (IPR001781) - T[147-210] 11.098 |
| SMART |
Znf_LIM (IPR001781) - T[148-203] 9.1E-9 |
| Pfam |
Znf_LIM (IPR001781) - T[149-206] 6.6E-7 |
| ProSitePatterns |
Znf_LIM (IPR001781) - T[149-185] . |
| SUPERFAMILY |
Rap/Ran-GAP_sf (IPR035974) - T[303-628] 8.89E-102 |
| ProSiteProfiles |
Rap_GAP_dom (IPR000331) - T[403-619] 68.936 |
| Gene3D |
Rap/Ran-GAP_sf (IPR035974) - T[411-600] 9.5E-76 |
| Pfam |
Rap_GAP_dom (IPR000331) - T[432-612] 1.9E-60 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SI1L3_HUMAN | 36.111 % | 229 | 5.81E-62 |
| RPGP1_HUMAN | 40.58 % | 411 | 1.67E-132 |
| RPGP2_HUMAN | 47.357 % | 408 | 2.01E-130 |