- Molecular Tool 'Hr-beta-catenin mRNA (Kumano 2006)' >
- Transcript 'KH2012:KH.C1.448.v1....'
Transcript Model
Transcript Id
KH2012:KH.C1.448.v1.A.ND2-1
Possible name(s)
RAP1GAP; RAP1GAP2; SIPA1L3
Gene model
Location
KhC1 [5,158,017 / 5,188,736]
Amino acid sequence
Length: 805
>KH.C1.448.v1.A.ND2-1
VKPSFVRLLKLMKFSKMSLRFHCSYIVTSNVRQKREARSRNKYNRLLEHRMLITSNDNLT
TQSKCHGCGFVLETGSDPHMSINGVHYHKDCFKCRKCDASLTLKTARKESDGGILCEPCS
EDDSNSKVSDANKGTRMDEQRCSFHITPTPEIQPDAPTPLYPSINDILRRGPPFAQVIPP
PQGGYWAQGFHAQSRHVTSDPRTLKPTQTPVSCRLQRDEVTTAYRDHFVGKEHVNIYAYD
YNSENIGSIIMSVKYESVAEGSDLGQHRVLLRCRHASWTKCFPVVPESGGPVQWAKSMCE
DITVDRFYPIVCPNVWQSIIQFDEHCVNSSHKFGVLYQKARQTKEEEVFGNCEESPAFKE
FLDFLGDNVDLQGFGGFRGGLDVNHGHTGQTSVHSHFLDQEVMFHVSTKLPYVEGDRQQL
QRKRHIGNDIVALVFQDDETPFVPNMITSHFLHAYIVIQPIDPCTENCRYKVSVTCREDV
PEFEPLLPEPAVFGRNEQFRDWLYCKLMNAEWACCKSEQFAKLQYRTRSMLLDQLHDEVN
KGTELMLGLTSQSGGDNISTSSASSDTQKEAIGFYETFKKLAKNKSFDDVNGSPTLHHGK
GSSDKLVSEKKWGFKKKQNGSFNVIGSKGDTHASHTVQDSGHASDVALHKSNQGSVNSLN
ESPQKNRQLRSSSPCQSCGSYTSLDSDTGLESIASSSRTDSWPRPNKHTALKKSNSSTER
HSAAIIENGAAEDNANEVNEMKTELKKLKLEKSDFSAQQQEILRLRDEVKRLKDKDSTHK
KTDINSNPTLRALAATVATTEEHLV
Nucleotide sequence
Length: 2,968
>KH2012:KH.C1.448.v1.A.ND2-1
GGTCAAACCTTCTTTTGTGCGTCTTTTAAAATTAATGAAGTTTTCCAAAATGTCACTGCG
TTTCCACTGTTCATACATTGTAACATCGAATGTCAGACAAAAACGTGAAGCAAGGTCAAG
AAATAAATATAACCGGTTGCTTGAACATCGAATGCTTATTACATCAAATGACAATCTTAC
GACGCAGAGCAAATGTCATGGATGTGGGTTTGTGTTGGAGACAGGATCCGATCCTCACAT
GTCAATCAACGGTGTTCACTACCATAAGGATTGCTTCAAATGTCGAAAATGCGACGCTTC
ACTCACGTTAAAGACCGCCCGAAAAGAGTCTGATGGAGGTATATTATGCGAACCATGTTC
TGAAGATGACAGCAACAGCAAAGTTTCAGATGCAAACAAGGGCACGCGAATGGACGAACA
AAGATGTTCTTTTCACATCACACCGACTCCTGAAATTCAGCCGGACGCACCGACTCCATT
GTACCCATCCATCAACGATATCCTTCGACGAGGTCCCCCTTTCGCCCAAGTAATTCCTCC
ACCCCAAGGCGGGTATTGGGCGCAAGGGTTTCACGCTCAATCTCGCCACGTCACCTCTGA
CCCCCGCACCTTAAAACCCACCCAAACCCCAGTCAGTTGTCGTTTACAACGTGATGAAGT
GACGACGGCGTACCGAGACCACTTTGTTGGAAAGGAGCATGTCAACATATATGCGTATGA
TTATAACAGCGAGAACATCGGTTCGATCATTATGTCGGTGAAATATGAAAGTGTCGCTGA
AGGAAGCGACCTTGGTCAACACAGAGTCTTATTAAGATGTCGCCACGCTTCGTGGACAAA
ATGTTTTCCTGTTGTTCCCGAGAGTGGTGGGCCTGTACAGTGGGCTAAGAGCATGTGCGA
AGATATCACTGTAGATCGGTTTTACCCAATCGTTTGCCCGAACGTGTGGCAATCAATCAT
ACAGTTCGACGAGCATTGTGTCAACTCATCACATAAATTCGGAGTGCTTTACCAGAAAGC
AAGGCAAACCAAAGAAGAAGAAGTGTTCGGGAATTGTGAGGAAAGTCCTGCCTTTAAAGA
GTTTCTTGACTTCTTGGGAGATAACGTTGACCTGCAGGGTTTCGGTGGTTTCCGCGGTGG
TCTTGACGTCAACCACGGCCACACTGGCCAAACCTCGGTACACAGTCACTTCCTCGATCA
GGAGGTTATGTTCCACGTATCTACCAAGCTTCCATACGTCGAAGGTGACAGACAGCAGTT
GCAACGTAAGCGTCACATCGGTAATGACATAGTGGCTCTTGTGTTCCAAGATGACGAAAC
TCCCTTTGTCCCAAACATGATTACGTCTCACTTTCTACATGCGTACATCGTCATTCAACC
TATTGATCCATGCACTGAAAACTGCAGATACAAGGTATCCGTGACGTGTCGTGAGGATGT
GCCAGAGTTTGAACCACTGTTGCCTGAACCTGCTGTATTTGGACGGAACGAACAATTCCG
TGACTGGCTCTATTGTAAACTTATGAATGCTGAATGGGCTTGTTGCAAGTCTGAACAATT
CGCAAAACTTCAGTACAGAACTCGTTCGATGCTGTTGGACCAACTTCATGATGAAGTAAA
CAAAGGCACCGAGTTGATGTTGGGACTGACATCTCAGTCCGGAGGAGACAACATCAGCAC
TTCGTCTGCATCATCGGATACACAGAAGGAAGCAATCGGATTTTACGAAACTTTTAAAAA
ATTGGCCAAAAATAAATCGTTTGACGATGTCAATGGTAGCCCAACATTACACCACGGCAA
AGGAAGCTCAGATAAACTAGTTTCTGAAAAGAAATGGGGTTTCAAAAAGAAACAAAATGG
CAGTTTCAATGTAATTGGATCGAAAGGAGACACACATGCGAGCCACACTGTACAAGACAG
TGGTCATGCGTCAGACGTTGCGCTTCACAAATCCAACCAAGGTAGTGTGAACTCACTCAA
CGAATCTCCACAGAAAAATAGACAACTCCGATCGTCTTCGCCCTGTCAATCGTGTGGAAG
TTACACAAGTTTAGATTCAGATACTGGTCTGGAAAGCATCGCGTCATCGTCAAGAACCGA
CTCCTGGCCACGACCCAACAAACATACAGCGCTCAAGAAATCGAACAGTAGCACAGAACG
ACACAGTGCTGCCATAATAGAAAATGGGGCGGCAGAAGACAATGCAAATGAAGTTAATGA
AATGAAGACTGAATTGAAAAAATTAAAACTTGAAAAGAGTGATTTCAGTGCGCAGCAACA
GGAAATACTCCGACTTCGAGATGAAGTGAAACGACTTAAAGATAAAGATTCCACCCACAA
GAAAACTGATATTAATTCAAACCCGACTTTACGAGCTCTCGCCGCAACTGTTGCCACTAC
CGAAGAACATTTGGTGTGACGTCATGATTCAAATCAGTATGACGTGTAAACTACGTCATA
TTAACAAACCAACAACGTTCGCAAGCCAAGAGTGTTGGACTTAACTTGATCAACTTTTAT
CGACTTGCGGATCGGACCACAACAAACAAAGAGAAGAAAAACTCTTCCTTTTGTCTTCAT
CGAGTCATTTGCGTTATCTGACGTCGTTTTGTCCACGTACTTTTGACTGTGAATCATGTA
AACTGAATAGTAATTATATATTAATGATAACTGTATTGTTTATATTCCGTTGTCTGCCGT
TGCTCGCTGTCTCCCTCAAGAACGTCTCCCTTTCATATTTTATACATTTTGTTATTTAAA
CTGCTTATGTTGTACCTGATATGAGAGTTCAGTTTGCACGGCAAATCGTTCCTATGTTTC
CTTTTTGTAAAAGAATATATTTGAAAATGTGGGTGTAGATTTCTACTGCATTTTCATCGC
TGCTCACTTACATGGCTCACAACAGTATTCTATTTTCTTTTTTTACCGTACAAGCCGCGT
ATGGGCGTTAATAAATCAACAAAACAGA
| ProSiteProfiles |
Znf_LIM (IPR001781) - T[63-126] 11.098 |
| SMART |
Znf_LIM (IPR001781) - T[64-119] 9.1E-9 |
| ProSitePatterns |
Znf_LIM (IPR001781) - T[65-101] . |
| Pfam |
Znf_LIM (IPR001781) - T[65-122] 5.9E-7 |
| SUPERFAMILY |
Rap/Ran-GAP_sf (IPR035974) - T[219-544] 7.19E-102 |
| ProSiteProfiles |
Rap_GAP_dom (IPR000331) - T[319-535] 68.936 |
| Gene3D |
Rap/Ran-GAP_sf (IPR035974) - T[327-516] 8.0E-76 |
| Pfam |
Rap_GAP_dom (IPR000331) - T[348-528] 1.6E-60 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SI1L2_HUMAN | 39.82 % | 227 | 5.85E-62 |
| RPGP1_HUMAN | 40.419 % | 410 | 2.91E-133 |
| RPGP2_HUMAN | 47.059 % | 406 | 8.06E-131 |