Login
Help

TRANSCRIPT CARD

Submit your Data

  1. Transcript 'Phmamm.CG.MTP2014.S2...'
  2. Transcript 'KH2012:KH.C14.40.v1....'

Transcript Model

Transcript Id

KH2012:KH.C14.40.v1.A.SL2-1

Possible name(s)

CGNL1; TMF1

Location

KhC14 [1,471,858 / 1,486,163]

Sequences

Amino acid sequence

Length: 1,148

>KH.C14.40.v1.A.SL2-1
YMMSWFDFSDIAKTALNEAQKRIDKVLDIQEDGKAKLNTGSDSTVLPDIGTIIKTDVSPE
QEHNTSLSDMQSLKTPLKPLNVKQARSLQLSQKKRAKPVKLGVSLTKKSSPREKTKTPSI
QSEQVNANWEEKFDEISLEDNKEDDFIPQINLPHELSEISAPKVQPNQDNSKLSQSKVYS
DTNNDIRTNNIHIDTETDSVKENENFSTDSNTSNSSPRIHAPVVQCSSEATHSPCGSPTT
ATSSEIDILEHESYHSESSSPVMKPVKDEGNFRTEDLSFPTSPDHSEASDIIRLNGHCSS
PLSIEDSEPVMLLVAETLQKSISEMSLESDSQVEVHQFCEDFSQSTLEDSQSPPEDPMQN
SNTSTLQSDTQNTNLSSSVSSEENMTHTIADALKEDTETKDAASENKDLHETESKTKSET
ENFRIFDENTKTEIPLLVENVETHSLLENSLELCEKDKGHPTEAEGKTKTEVLESSETVA
VAEQTPIVSHNSLGNKVNIDLSKEEIIKMMNEKFEVYEQQLMTLSLSNAKLNEDNDNLRS
EASHLETFDHIQYQKEKQNLLNTIDSVSEQLQDMEVEKSNLLEKLEMTKASLSQRLSNEH
VQQLLAEKEDSIQGLLQEGEALSKKHLQQSNVIKKLRAKGAEREDAIKDLTERLTRAEEE
NKILKQKVSAIEGQSSEDRGTAERLSEAYQEREQEVNELRSLLEDAEEKRRAAQATLDAA
YRDLGDMNKKEASMKSNHERDLQVREDSVRMVMQQEMEKMQQEHEHHRQMLLLQMTELRG
TVERTEMICSRREDQLKKEIQDLQQQLQDSELRNHELGESISASTRPLLRQMENLQATHA
AQEKTWETLEKSLTSRLNEQQNQLLAAQDKERFAQMALMEAKSRLLRSDQQLTEATQTIE
QITSELESLRKNRREHDKEVTRLKKIIEENEEQHSDAMSKARRDRVNLENQLDMEKVRSE
VEKKKFQSQVETVQKEKERLLWLSRSESVGSSASIFNTDVESVASSSDTFNHVDSFDRSY
QLGSTAVYDTIRGASGSALLENLQSQLKQRDGEIAQLQGEINTLERTRSSMAEEIVRLTN
ENEEMEVTVGQVDELTRKLKEVTARHDAVLTMYGEKAEEAEELKLDLEDVKTMYRNQIDS
LLRNDYVK

Nucleotide sequence

Length: 4,001

>KH2012:KH.C14.40.v1.A.SL2-1
TCTGCAGGTTAAATATAGCATGATGCTTGTACATTAGTAATATAGTCAAACGATTGGCTA
ATTTCAGTTTAACATATAATCAATAAGCAAGAGAAAGAGCTTGGACATACATAATACATG
ATGAGCTGGTTTGATTTTTCGGATATCGCAAAAACTGCTCTCAATGAAGCACAAAAACGA
ATTGACAAAGTTTTGGATATACAGGAAGATGGTAAAGCAAAACTAAATACTGGATCAGAT
TCAACCGTTTTGCCGGATATTGGTACAATCATTAAAACAGATGTCAGTCCAGAGCAAGAG
CACAACACATCACTAAGTGACATGCAGAGTTTAAAAACACCTTTAAAACCCCTGAATGTA
AAGCAAGCTCGATCACTCCAACTTTCGCAAAAGAAACGCGCCAAGCCTGTTAAACTTGGT
GTTTCATTGACTAAGAAATCAAGCCCAAGAGAAAAAACTAAAACACCTTCAATACAAAGT
GAGCAAGTTAATGCCAATTGGGAGGAAAAATTCGACGAAATTTCACTTGAAGACAATAAA
GAAGATGATTTCATTCCACAAATAAATTTACCTCATGAACTATCTGAAATCTCGGCTCCT
AAAGTTCAGCCAAACCAAGACAATTCTAAATTGAGTCAATCTAAAGTGTACAGCGATACA
AATAACGACATTAGAACTAACAACATTCATATTGATACAGAAACGGATTCTGTAAAGGAA
AATGAGAACTTTTCAACAGACTCAAATACCAGTAACAGTTCACCAAGAATTCATGCCCCA
GTTGTACAATGTTCATCTGAAGCCACACATTCTCCTTGTGGATCGCCCACCACAGCAACC
TCCAGTGAGATTGACATACTTGAACATGAGAGCTACCACAGTGAATCTTCATCACCAGTT
ATGAAGCCTGTAAAAGATGAGGGCAACTTCCGAACTGAAGATCTCTCGTTTCCAACCTCA
CCAGATCACAGTGAGGCATCCGACATCATTCGTTTAAACGGACATTGCTCCTCTCCCCTC
TCAATTGAAGATTCCGAGCCAGTGATGCTACTTGTTGCTGAAACTTTACAGAAGTCCATC
AGTGAAATGTCTCTAGAATCCGATTCACAAGTGGAAGTTCATCAATTTTGTGAAGATTTC
TCACAATCTACTCTTGAAGACTCCCAAAGTCCTCCGGAAGACCCAATGCAAAACAGCAAT
ACCTCTACTTTACAAAGCGACACACAAAACACGAATCTTAGCTCTTCTGTATCATCTGAA
GAAAACATGACACACACGATTGCTGATGCTCTTAAAGAGGACACAGAAACTAAAGACGCC
GCCTCCGAAAATAAGGATTTACACGAAACAGAATCGAAAACTAAATCGGAAACTGAAAAT
TTTAGGATATTTGATGAAAACACTAAAACAGAAATACCATTGCTTGTTGAAAATGTAGAA
ACGCATTCTTTATTGGAGAATAGTTTGGAATTATGTGAAAAGGATAAGGGTCATCCTACA
GAAGCTGAAGGAAAGACGAAAACGGAGGTTTTGGAATCTTCTGAAACTGTTGCCGTGGCA
GAACAAACACCTATTGTTTCACACAACAGCCTGGGAAACAAGGTGAATATTGATTTGTCA
AAAGAGGAAATTATCAAAATGATGAACGAGAAATTTGAGGTTTATGAACAGCAGTTAATG
ACTCTTAGTCTCAGCAATGCAAAACTGAATGAAGACAATGATAATTTGCGGAGTGAAGCA
AGCCACTTAGAAACTTTTGACCATATCCAGTATCAGAAGGAAAAACAAAACCTGCTCAAC
ACCATAGACAGTGTATCTGAACAACTGCAGGACATGGAAGTGGAAAAATCAAACTTACTT
GAAAAACTTGAGATGACAAAAGCCAGTTTAAGTCAAAGACTGAGCAATGAACATGTGCAG
CAACTTTTAGCAGAAAAAGAAGATTCCATACAAGGCTTGCTACAGGAAGGTGAAGCTTTA
TCAAAGAAACACCTCCAGCAGAGCAATGTCATCAAGAAATTAAGAGCGAAAGGAGCGGAG
CGCGAAGATGCCATAAAGGACTTAACTGAGAGACTTACAAGAGCAGAGGAAGAAAACAAA
ATTTTAAAACAGAAAGTTTCCGCAATTGAAGGACAAAGTTCGGAAGACCGTGGAACAGCC
GAACGACTTTCCGAGGCTTACCAGGAGAGGGAGCAAGAGGTTAACGAGTTAAGGAGTCTT
CTGGAAGATGCAGAGGAGAAAAGAAGAGCTGCACAAGCTACTCTGGATGCCGCGTATAGA
GATCTTGGAGATATGAACAAAAAGGAAGCATCCATGAAAAGCAACCATGAACGTGATCTT
CAAGTCCGGGAGGACTCTGTGAGGATGGTGATGCAGCAAGAGATGGAAAAGATGCAACAA
GAGCACGAACACCATAGACAGATGCTCCTACTCCAGATGACAGAGTTACGTGGGACAGTA
GAACGTACAGAGATGATTTGTTCAAGAAGAGAAGACCAACTTAAAAAGGAAATACAAGAT
TTGCAGCAGCAACTGCAAGACTCTGAGTTACGTAATCATGAACTCGGCGAAAGTATTTCT
GCCTCAACAAGGCCACTTTTGCGCCAGATGGAAAATCTGCAGGCAACACACGCTGCACAA
GAAAAAACTTGGGAAACACTGGAAAAAAGCCTCACTTCAAGACTAAATGAACAACAGAAC
CAGCTGTTGGCTGCACAGGACAAAGAACGCTTTGCGCAAATGGCTCTCATGGAGGCAAAA
TCTCGACTTTTAAGGTCAGACCAGCAACTGACAGAAGCCACACAAACAATTGAGCAAATT
ACATCAGAATTGGAAAGTTTGAGAAAAAATCGCCGAGAGCATGATAAAGAAGTCACACGA
TTGAAGAAGATCATAGAAGAGAATGAGGAGCAGCATTCGGATGCTATGAGCAAGGCAAGA
AGAGACAGAGTAAACCTCGAAAATCAGTTGGATATGGAAAAAGTTCGATCAGAAGTCGAA
AAAAAGAAGTTTCAGTCGCAAGTTGAAACTGTTCAAAAGGAAAAGGAGCGATTGCTTTGG
TTAAGTCGTTCAGAAAGTGTTGGATCATCTGCGAGTATATTTAACACGGATGTGGAATCC
GTAGCTAGTTCCTCAGACACATTTAACCATGTTGATTCGTTTGACCGATCTTACCAGCTT
GGTTCAACAGCTGTGTACGATACCATACGTGGCGCCAGTGGTTCTGCTTTGCTCGAAAAT
CTACAATCTCAATTAAAGCAAAGAGACGGGGAAATAGCTCAACTGCAGGGCGAAATTAAC
ACGCTTGAGCGAACCCGGTCATCCATGGCAGAGGAGATCGTGAGGCTGACCAATGAGAAT
GAAGAGATGGAGGTTACTGTAGGTCAAGTTGATGAACTGACGAGAAAGTTAAAAGAAGTA
ACAGCTAGACACGATGCAGTGCTAACTATGTATGGGGAAAAAGCTGAAGAGGCAGAAGAA
CTTAAACTGGACCTTGAAGACGTTAAAACTATGTACAGAAACCAGATTGACTCACTTTTA
CGAAATGACTACGTCAAATAAATTTCTTTCTCCAATAAGCCATCTCCATGTATTTGTGTA
TATTCCAAATGAAGCAATTACTTGGTAAATTCAACATTTTAACCCTGAAGCTTTACACCC
TACTGCGTGCACTTATTTTGCATGCAGATATGATACAATTTTATTCATAAAACTGAAATA
TCAGTAATTGGAAAAAAATTGAGTTTGCACTTTTCTGGTAAACTATTTTCTCCATGTAGA
TATACCAGATTGTCATTTTTGCCGCTTATTTATTTATTTTAGACCCAACATGCTAAGATT
TCTATTGTAACGGTGCAATAGTGTCTGAATCTTATTGAATAAATATTATGCAGACTGACT
GTCAATTGTGACATAGTGTGTTTATTTGTCGTCAACTGACATATTATGTTGGTAACAAGC
ACAAACTGTTTGTGACAGAAAAAATGTCTGGTTGAAATAAA

InterProScan

Pfam
TMF_DNA-bd (IPR022092) - T[600-672] 1.2E-13
Pfam
TMF_TATA-bd (IPR022091) - T[1034-1141] 1.1E-31

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TMF1_HUMAN 36.778 % 360 1.31E-106