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TRANSCRIPT CARD

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  1. Clone 'cilv019m06' > 
  2. Clone 'AHC0AAA147YK16' > 
  3. Transcript 'KH2012:KH.C14.40.v1....'

Transcript Model

Transcript Id

KH2012:KH.C14.40.v1.A.SL1-1

Possible name(s)

CGNL1; TMF1

Gene model

KH2012:KH.C14.40

Location

KhC14 [1,471,865 / 1,486,163]

Sequences

Amino acid sequence

Length: 1,148

>KH.C14.40.v1.A.SL1-1
YMMSWFDFSDIAKTALNEAQKRIDKVLDIQEDGKAKLNTGSDSTVLPDIGTIIKTDVSPE
QEHNTSLSDMQSLKTPLKPLNVKQARSLQLSQKKRAKPVKLGVSLTKKSSPREKTKTPSI
QSEQVNANWEEKFDEISLEDNKEDDFIPQINLPHELSEISAPKVQPNQDNSKLSQSKVYS
DTNNDIRTNNIHIDTETDSVKENENFSTDSNTSNSSPRIHAPVVQCSSEATHSPCGSPTT
ATSSEIDILEHESYHSESSSPVMKPVKDEGNFRTEDLSFPTSPDHSEASDIIRLNGHCSS
PLSIEDSEPVMLLVAETLQKSISEMSLESDSQVEVHQFCEDFSQSTLEDSQSPPEDPMQN
SNTSTLQSDTQNTNLSSSVSSEENMTHTIADALKEDTETKDAASENKDLHETESKTKSET
ENFRIFDENTKTEIPLLVENVETHSLLENSLELCEKDKGHPTEAEGKTKTEVLESSETVA
VAEQTPIVSHNSLGNKVNIDLSKEEIIKMMNEKFEVYEQQLMTLSLSNAKLNEDNDNLRS
EASHLETFDHIQYQKEKQNLLNTIDSVSEQLQDMEVEKSNLLEKLEMTKASLSQRLSNEH
VQQLLAEKEDSIQGLLQEGEALSKKHLQQSNVIKKLRAKGAEREDAIKDLTERLTRAEEE
NKILKQKVSAIEGQSSEDRGTAERLSEAYQEREQEVNELRSLLEDAEEKRRAAQATLDAA
YRDLGDMNKKEASMKSNHERDLQVREDSVRMVMQQEMEKMQQEHEHHRQMLLLQMTELRG
TVERTEMICSRREDQLKKEIQDLQQQLQDSELRNHELGESISASTRPLLRQMENLQATHA
AQEKTWETLEKSLTSRLNEQQNQLLAAQDKERFAQMALMEAKSRLLRSDQQLTEATQTIE
QITSELESLRKNRREHDKEVTRLKKIIEENEEQHSDAMSKARRDRVNLENQLDMEKVRSE
VEKKKFQSQVETVQKEKERLLWLSRSESVGSSASIFNTDVESVASSSDTFNHVDSFDRSY
QLGSTAVYDTIRGASGSALLENLQSQLKQRDGEIAQLQGEINTLERTRSSMAEEIVRLTN
ENEEMEVTVGQVDELTRKLKEVTARHDAVLTMYGEKAEEAEELKLDLEDVKTMYRNQIDS
LLRNDYVK

Nucleotide sequence

Length: 3,994

>KH2012:KH.C14.40.v1.A.SL1-1
GTTAAATATAGCATGATGCTTGTACATTAGTAATATAGTCAAACGATTGGCTAATTTCAG
TTTAACATATAATCAATAAGCAAGAGAAAGAGCTTGGACATACATAATACATGATGAGCT
GGTTTGATTTTTCGGATATCGCAAAAACTGCTCTCAATGAAGCACAAAAACGAATTGACA
AAGTTTTGGATATACAGGAAGATGGTAAAGCAAAACTAAATACTGGATCAGATTCAACCG
TTTTGCCGGATATTGGTACAATCATTAAAACAGATGTCAGTCCAGAGCAAGAGCACAACA
CATCACTAAGTGACATGCAGAGTTTAAAAACACCTTTAAAACCCCTGAATGTAAAGCAAG
CTCGATCACTCCAACTTTCGCAAAAGAAACGCGCCAAGCCTGTTAAACTTGGTGTTTCAT
TGACTAAGAAATCAAGCCCAAGAGAAAAAACTAAAACACCTTCAATACAAAGTGAGCAAG
TTAATGCCAATTGGGAGGAAAAATTCGACGAAATTTCACTTGAAGACAATAAAGAAGATG
ATTTCATTCCACAAATAAATTTACCTCATGAACTATCTGAAATCTCGGCTCCTAAAGTTC
AGCCAAACCAAGACAATTCTAAATTGAGTCAATCTAAAGTGTACAGCGATACAAATAACG
ACATTAGAACTAACAACATTCATATTGATACAGAAACGGATTCTGTAAAGGAAAATGAGA
ACTTTTCAACAGACTCAAATACCAGTAACAGTTCACCAAGAATTCATGCCCCAGTTGTAC
AATGTTCATCTGAAGCCACACATTCTCCTTGTGGATCGCCCACCACAGCAACCTCCAGTG
AGATTGACATACTTGAACATGAGAGCTACCACAGTGAATCTTCATCACCAGTTATGAAGC
CTGTAAAAGATGAGGGCAACTTCCGAACTGAAGATCTCTCGTTTCCAACCTCACCAGATC
ACAGTGAGGCATCCGACATCATTCGTTTAAACGGACATTGCTCCTCTCCCCTCTCAATTG
AAGATTCCGAGCCAGTGATGCTACTTGTTGCTGAAACTTTACAGAAGTCCATCAGTGAAA
TGTCTCTAGAATCCGATTCACAAGTGGAAGTTCATCAATTTTGTGAAGATTTCTCACAAT
CTACTCTTGAAGACTCCCAAAGTCCTCCGGAAGACCCAATGCAAAACAGCAATACCTCTA
CTTTACAAAGCGACACACAAAACACGAATCTTAGCTCTTCTGTATCATCTGAAGAAAACA
TGACACACACGATTGCTGATGCTCTTAAAGAGGACACAGAAACTAAAGACGCCGCCTCCG
AAAATAAGGATTTACACGAAACAGAATCGAAAACTAAATCGGAAACTGAAAATTTTAGGA
TATTTGATGAAAACACTAAAACAGAAATACCATTGCTTGTTGAAAATGTAGAAACGCATT
CTTTATTGGAGAATAGTTTGGAATTATGTGAAAAGGATAAGGGTCATCCTACAGAAGCTG
AAGGAAAGACGAAAACGGAGGTTTTGGAATCTTCTGAAACTGTTGCCGTGGCAGAACAAA
CACCTATTGTTTCACACAACAGCCTGGGAAACAAGGTGAATATTGATTTGTCAAAAGAGG
AAATTATCAAAATGATGAACGAGAAATTTGAGGTTTATGAACAGCAGTTAATGACTCTTA
GTCTCAGCAATGCAAAACTGAATGAAGACAATGATAATTTGCGGAGTGAAGCAAGCCACT
TAGAAACTTTTGACCATATCCAGTATCAGAAGGAAAAACAAAACCTGCTCAACACCATAG
ACAGTGTATCTGAACAACTGCAGGACATGGAAGTGGAAAAATCAAACTTACTTGAAAAAC
TTGAGATGACAAAAGCCAGTTTAAGTCAAAGACTGAGCAATGAACATGTGCAGCAACTTT
TAGCAGAAAAAGAAGATTCCATACAAGGCTTGCTACAGGAAGGTGAAGCTTTATCAAAGA
AACACCTCCAGCAGAGCAATGTCATCAAGAAATTAAGAGCGAAAGGAGCGGAGCGCGAAG
ATGCCATAAAGGACTTAACTGAGAGACTTACAAGAGCAGAGGAAGAAAACAAAATTTTAA
AACAGAAAGTTTCCGCAATTGAAGGACAAAGTTCGGAAGACCGTGGAACAGCCGAACGAC
TTTCCGAGGCTTACCAGGAGAGGGAGCAAGAGGTTAACGAGTTAAGGAGTCTTCTGGAAG
ATGCAGAGGAGAAAAGAAGAGCTGCACAAGCTACTCTGGATGCCGCGTATAGAGATCTTG
GAGATATGAACAAAAAGGAAGCATCCATGAAAAGCAACCATGAACGTGATCTTCAAGTCC
GGGAGGACTCTGTGAGGATGGTGATGCAGCAAGAGATGGAAAAGATGCAACAAGAGCACG
AACACCATAGACAGATGCTCCTACTCCAGATGACAGAGTTACGTGGGACAGTAGAACGTA
CAGAGATGATTTGTTCAAGAAGAGAAGACCAACTTAAAAAGGAAATACAAGATTTGCAGC
AGCAACTGCAAGACTCTGAGTTACGTAATCATGAACTCGGCGAAAGTATTTCTGCCTCAA
CAAGGCCACTTTTGCGCCAGATGGAAAATCTGCAGGCAACACACGCTGCACAAGAAAAAA
CTTGGGAAACACTGGAAAAAAGCCTCACTTCAAGACTAAATGAACAACAGAACCAGCTGT
TGGCTGCACAGGACAAAGAACGCTTTGCGCAAATGGCTCTCATGGAGGCAAAATCTCGAC
TTTTAAGGTCAGACCAGCAACTGACAGAAGCCACACAAACAATTGAGCAAATTACATCAG
AATTGGAAAGTTTGAGAAAAAATCGCCGAGAGCATGATAAAGAAGTCACACGATTGAAGA
AGATCATAGAAGAGAATGAGGAGCAGCATTCGGATGCTATGAGCAAGGCAAGAAGAGACA
GAGTAAACCTCGAAAATCAGTTGGATATGGAAAAAGTTCGATCAGAAGTCGAAAAAAAGA
AGTTTCAGTCGCAAGTTGAAACTGTTCAAAAGGAAAAGGAGCGATTGCTTTGGTTAAGTC
GTTCAGAAAGTGTTGGATCATCTGCGAGTATATTTAACACGGATGTGGAATCCGTAGCTA
GTTCCTCAGACACATTTAACCATGTTGATTCGTTTGACCGATCTTACCAGCTTGGTTCAA
CAGCTGTGTACGATACCATACGTGGCGCCAGTGGTTCTGCTTTGCTCGAAAATCTACAAT
CTCAATTAAAGCAAAGAGACGGGGAAATAGCTCAACTGCAGGGCGAAATTAACACGCTTG
AGCGAACCCGGTCATCCATGGCAGAGGAGATCGTGAGGCTGACCAATGAGAATGAAGAGA
TGGAGGTTACTGTAGGTCAAGTTGATGAACTGACGAGAAAGTTAAAAGAAGTAACAGCTA
GACACGATGCAGTGCTAACTATGTATGGGGAAAAAGCTGAAGAGGCAGAAGAACTTAAAC
TGGACCTTGAAGACGTTAAAACTATGTACAGAAACCAGATTGACTCACTTTTACGAAATG
ACTACGTCAAATAAATTTCTTTCTCCAATAAGCCATCTCCATGTATTTGTGTATATTCCA
AATGAAGCAATTACTTGGTAAATTCAACATTTTAACCCTGAAGCTTTACACCCTACTGCG
TGCACTTATTTTGCATGCAGATATGATACAATTTTATTCATAAAACTGAAATATCAGTAA
TTGGAAAAAAATTGAGTTTGCACTTTTCTGGTAAACTATTTTCTCCATGTAGATATACCA
GATTGTCATTTTTGCCGCTTATTTATTTATTTTAGACCCAACATGCTAAGATTTCTATTG
TAACGGTGCAATAGTGTCTGAATCTTATTGAATAAATATTATGCAGACTGACTGTCAATT
GTGACATAGTGTGTTTATTTGTCGTCAACTGACATATTATGTTGGTAACAAGCACAAACT
GTTTGTGACAGAAAAAATGTCTGGTTGAAATAAA

InterProScan

Pfam
TMF_DNA-bd (IPR022092) - T[600-672] 1.2E-13
Pfam
TMF_TATA-bd (IPR022091) - T[1034-1141] 1.1E-31

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
TMF1_HUMAN 36.778 % 360 1.31E-106