- Clone 'cien55345' >
- Clone 'citb029l18' >
- Clone 'cima822180' >
- Clone 'cicl028b05' >
- Transcript 'KH2012:KH.C14.390.v1...'
Transcript Model
Transcript Id
KH2012:KH.C14.390.v1.R.ND1-1
Possible name(s)
SH3RF1; SH3RF2; SH3RF3
Gene model
Location
KhC14 [108,585 / 129,456]
Amino acid sequence
Length: 526
>KH.C14.390.v1.R.ND1-1
TTSRFYLGLHIYFDLNIMNSEFINDLLECSVCLKPLDQQNKVLPCQHTFCKSCLFSIVRS
HKELRCPECRVLVKQKVDDLPANILLIRLLDGIKSQESNKPQQPAEKTEFRRHSVEGILT
SSIPASGGAKDGGNGEGGRISTRRNNRHTVHERSGSEPHTTSGLQIPTQSRPHARAIHNY
DSQVPSDLSFKKGDLIMLIKKIDENWTSGECHGKMGVFPTNYVEIIHPLPTERPYCFALY
DFESSDAEKDRDCLTFSKNEKILVIRRVDENWVEGMLRDKIGIFPLSFVKLSEEARKLFE
DLHISDPHPGSKNDGDGKDKGTLGAAARKILSSKPGYKSNKKRHSFPTFQAAKASGEAVP
PTTYRHSMELGASASIPTSKHGTTSNTNPTVDSDFQNPTNPSQTSRVDNTVRGGGGEINI
ASSPTSIKMPMRVSSNVHILQCRTGNGDHGKPTERSPRASIPLPSSGKIVTASYSYHAEK
PDELELLKGESYQITEICNDGWCRGVHIKSGKSGVFPGNYVASNIK
Nucleotide sequence
Length: 2,072
>KH2012:KH.C14.390.v1.R.ND1-1
ATACCACCAGCCGTTTTTATTTAGGCCTACATATATATTTCGACTTAAATATCATGAATT
CTGAGTTTATTAATGATTTATTGGAATGTTCTGTCTGTTTGAAACCGCTGGATCAACAGA
ATAAGGTCCTCCCATGTCAACATACGTTCTGTAAATCTTGTCTTTTTTCCATTGTGCGCT
CACACAAGGAGTTGCGTTGTCCTGAGTGTCGGGTCCTCGTTAAACAAAAAGTTGACGATC
TCCCGGCAAACATTCTCCTCATTCGTTTATTAGACGGAATCAAATCACAAGAATCTAACA
AACCACAGCAACCCGCTGAAAAAACGGAGTTTCGTCGACATTCGGTTGAAGGTATACTAA
CCTCCTCCATACCCGCAAGTGGTGGGGCAAAGGATGGTGGTAATGGGGAGGGGGGGAGGA
TAAGTACAAGGAGGAACAACAGACATACCGTGCATGAGCGATCTGGTAGTGAACCTCACA
CTACAAGTGGTTTGCAGATTCCCACACAAAGCCGACCTCATGCAAGAGCAATACACAACT
ATGATTCCCAAGTACCAAGTGATCTTTCATTTAAGAAAGGTGACCTAATAATGTTGATTA
AGAAGATAGATGAAAACTGGACGAGTGGGGAATGCCATGGGAAGATGGGAGTATTTCCAA
CTAATTATGTGGAGATAATCCACCCTTTACCCACCGAGAGACCTTATTGTTTTGCTTTGT
ATGATTTTGAATCGAGCGATGCAGAGAAAGATAGAGACTGTCTCACTTTTTCAAAGAACG
AAAAGATCCTGGTAATACGAAGAGTTGATGAGAATTGGGTTGAAGGAATGTTGAGAGATA
AGATTGGGATATTTCCTCTATCTTTTGTTAAGTTAAGTGAGGAAGCTCGTAAGTTGTTCG
AAGATCTCCACATCTCGGATCCGCATCCTGGGAGCAAGAACGATGGTGATGGTAAAGATA
AAGGAACATTGGGAGCAGCAGCACGGAAGATCTTAAGTAGCAAACCTGGATATAAAAGTA
ACAAGAAACGACATTCGTTTCCAACATTTCAAGCAGCTAAAGCATCGGGTGAAGCCGTAC
CTCCCACCACATACAGACATTCCATGGAGTTAGGAGCATCAGCAAGTATTCCAACTTCTA
AACATGGAACAACATCTAATACAAATCCAACAGTGGATTCAGATTTCCAAAATCCAACAA
ATCCAAGTCAGACTTCCCGTGTTGATAATACTGTGAGGGGGGGTGGTGGTGAAATAAACA
TAGCAAGCTCTCCTACAAGTATAAAGATGCCGATGAGGGTTTCTTCCAATGTTCATATAC
TACAGTGTCGTACTGGTAACGGTGATCATGGTAAACCAACTGAACGATCGCCACGTGCGT
CAATTCCGTTACCAAGCTCTGGGAAAATAGTGACAGCTTCATACTCGTACCATGCTGAGA
AACCCGATGAATTAGAATTATTGAAGGGTGAAAGTTATCAAATAACTGAGATATGCAACG
ATGGCTGGTGTAGAGGGGTTCATATCAAGAGTGGAAAGTCTGGTGTTTTTCCCGGCAATT
ATGTGGCAAGCAATATAAAATAGGTTGGCTGAACTACACGGGAACATGTTCACACAGCGC
TGCCCACGTTGCAACAAAGAATATGTGATGGATCATGTCTCACCAACCATGGGTTTAAAA
CAAACAGGGGAGAAATGTGCCGAGCAGAAGACTGGGGGAAGATGCCGAGGTGTATTATGC
GACACAATATTAGACTGGGAAGATTCACTACCAACCGACCAACTTAATTTATCCGATAAG
TTTTGTAAAGCAGCTGATCTAGCAATTACAATTGGTTCATCACTGCAAATTGTACCTGCA
GCCAACTTACCTCTTCTAACAAAGAAAAATGGTGGAAAAGTCGTGATTATCAATCTACAA
CAAACCAAACATGATAAGAAAGCAGATTTGTTAATAAGAGGGTATGCTGATGACATAATG
CGCATTGTGATGAACAAACTCAACATTTTAGTTCCTTCTTACACGAAACCTGTTGTACGT
TTGTGTTCGGATAATAAAATACCAGATTCTGT
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[16-103] 5.2E-17 |
| ProSiteProfiles |
Znf_RING (IPR001841) - T[29-70] 12.74 |
| Pfam |
Znf_C3HC4_RING-type (IPR018957) - T[29-69] 2.1E-9 |
| SMART |
Znf_RING (IPR001841) - T[29-69] 6.4E-6 |
| ProSitePatterns |
Znf_RING_CS (IPR017907) - T[45-54] . |
| SUPERFAMILY |
SH3-like_dom_sf (IPR036028) - T[167-233] 7.61E-21 - T[230-293] 5.12E-16 - T[451-522] 1.84E-16 |
| ProSiteProfiles |
SH3_domain (IPR001452) - T[169-228] 15.529 - T[231-294] 12.27 - T[465-526] 14.105 |
| SMART |
SH3_domain (IPR001452) - T[172-227] 3.5E-19 - T[234-293] 3.3E-12 - T[468-525] 2.5E-14 |
| PRINTS |
SH3_domain (IPR001452) - T[172-182] 1.3E-7 - T[186-201] 1.3E-7 - T[214-226] 1.3E-7 |
| Pfam |
SH3_domain (IPR001452) - T[173-225] 2.9E-13 - T[238-285] 9.0E-9 - T[472-522] 1.1E-11 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| SH3R3_HUMAN | 38.302 % | 329 | 2.53E-103 |
| SH3R1_HUMAN | 38.577 % | 319 | 2.66E-99 |
| SH3R2_HUMAN | 35.388 % | 258 | 7.89E-78 |