- Transcript 'KH2012:KH.C14.35.v1....'
Transcript Model
Transcript Id
KH2012:KH.C14.35.v1.A.SL1-1
Possible name(s)
AC091959.3; RBM26; RBM27
Gene model
Location
KhC14 [2,883,837 / 2,898,038]
Amino acid sequence
Length: 902
>KH.C14.35.v1.A.SL1-1
ICCCIFGIQVSFYQETKGTGVKMVAIDNVDALQTWLTKKLSPVCDADPKALAKYVVALVK
KEKSQDDLKTLCKEQLDVFLQKETDAFVSALFEALTSKSYIKEESITNVQTEVHRKSSSN
DKQKENSRSHRTKSRSRSPHRVRSQDGRRYNDDRRNRRRSPMASHRHQSNRRQRSRSSSP
IARSSRSSVSPVHKRRSHRSSPRQSRSPIRRKRIRKSSSPAQASENSQSKDGNQKSYSSE
TKEKKERCWDYDQKGFCMKGDSCPYDHGTDAVVVDDISITSPTRKNANEATNIDTRLPPP
IAHTNIEPLQHLIPRLPISMPMPIPPVMPPMSLPPPHILHQFPPPPLNLRPSNPNIMPPQ
PQPYNPEAPALHGIQNQQNPAINISNTFQKKPDQDNDSMKRPFHRTAGNRTIIVKKIPPS
LNNITKLNEHFTKFGSINNIQVKFNMQPNQALIEFAHPNSARAAMRDTHAILNNRFIRAF
WFNQNEIQTANNEASATSTIKDRVGSLPNPNQLKYTAPSIERKKANADVNVTRTITNPLA
PPAAEKTDKPNTDAATVEAKKAVIAARNSMRQKSQQRQRLVLQKKMELQKKKRGLLQKQV
EQQKLLLAKLDSNKNMSPKERLELIKTLKALTSSTDIIRHEKPSKVEVAIKQSQKQKDLL
DAELDLYNASTNGENTVSLKQKLNQLKVEAKTMGIVTGYRGGWSRGRGGSRMSSRGNHHR
FIRSGANLDRRPCEIRVSGFQDTEKDEMIAHFSEFGEIDTLTYDEEGITCAIKYKARQDA
EHAASNGASFKGRNLIIVWTSQSKPNQRDFTASSDNGGSVEKVEATIKSEVGVAAGNDED
DNDDDDEDNISVVVDRVEPFTPPQDDYGYPILEEELDEEALLTGGDIDDDDDVVSEERSW
RH
Nucleotide sequence
Length: 3,065
>KH2012:KH.C14.35.v1.A.SL1-1
CATCTAATATAGCGTATACGTAATTTAAATTTGTTGCTGCATCTTTGGAATTCAAGTTTC
TTTTTACCAAGAAACGAAAGGAACCGGAGTAAAAATGGTTGCAATAGATAACGTTGACGC
TTTGCAAACCTGGCTGACAAAGAAGTTATCCCCTGTTTGTGATGCGGATCCTAAGGCCCT
TGCCAAGTACGTTGTAGCTTTGGTTAAGAAAGAAAAAAGTCAAGATGATTTGAAAACTTT
ATGCAAAGAGCAGTTGGATGTTTTTCTTCAAAAGGAGACGGATGCTTTTGTTTCTGCATT
ATTTGAAGCTTTGACTTCCAAATCTTACATTAAAGAAGAATCAATCACGAATGTTCAAAC
TGAGGTTCATCGCAAATCAAGTTCAAATGACAAGCAGAAGGAAAATTCTCGTTCCCATCG
AACAAAATCACGTTCCAGGTCCCCACATAGAGTTCGCAGCCAAGATGGTCGAAGGTACAA
CGATGATAGAAGAAATAGGAGAAGGTCACCCATGGCCAGTCACAGACATCAAAGTAACAG
GCGACAACGTAGTCGTTCATCTTCACCAATAGCTCGATCATCAAGAAGTTCTGTTTCGCC
AGTTCATAAACGAAGGTCTCATCGTTCTTCACCAAGACAGTCAAGATCCCCCATTCGTAG
AAAAAGGATCCGAAAATCCTCTTCTCCTGCTCAAGCAAGTGAGAACTCCCAATCAAAAGA
TGGGAACCAAAAGTCTTATTCAAGTGAAACTAAAGAGAAGAAAGAAAGATGTTGGGATTA
TGATCAGAAAGGATTCTGTATGAAAGGAGACTCCTGTCCTTACGATCATGGCACAGATGC
TGTTGTAGTTGATGACATCTCAATAACATCTCCTACTCGGAAAAACGCGAACGAAGCTAC
GAACATAGACACCCGTTTGCCACCTCCTATAGCCCATACCAACATTGAACCATTGCAACA
CCTCATACCAAGACTGCCAATATCCATGCCTATGCCTATACCACCTGTGATGCCCCCCAT
GTCATTACCCCCACCCCATATTCTACACCAGTTCCCACCCCCACCTCTTAACCTTAGACC
AAGCAACCCTAACATTATGCCTCCACAACCCCAGCCTTATAACCCAGAAGCCCCTGCATT
ACACGGGATACAAAACCAACAAAATCCAGCAATCAACATCTCCAATACTTTCCAGAAGAA
GCCTGATCAAGATAATGATTCAATGAAACGACCTTTCCATAGAACTGCAGGCAATCGAAC
CATCATTGTAAAGAAGATTCCACCTTCATTAAACAACATCACTAAACTTAATGAACATTT
CACTAAGTTTGGCTCAATCAATAATATACAGGTAAAGTTCAACATGCAGCCCAACCAAGC
GTTAATTGAGTTCGCTCACCCTAACAGTGCCCGTGCAGCCATGCGCGATACCCATGCGAT
TCTCAACAATCGTTTTATTCGAGCTTTCTGGTTCAACCAGAATGAAATACAAACTGCCAA
CAATGAAGCTAGTGCAACATCTACAATAAAAGATCGCGTTGGTTCGCTTCCAAACCCTAA
CCAACTCAAATATACAGCTCCTTCTATTGAGAGAAAGAAGGCAAACGCAGACGTCAATGT
TACACGTACAATCACTAACCCTCTAGCTCCACCTGCTGCTGAAAAAACAGACAAACCAAA
CACTGATGCTGCCACCGTCGAAGCTAAGAAAGCGGTGATTGCTGCTCGCAACTCGATGAG
GCAGAAGAGCCAACAGCGTCAACGACTTGTTCTGCAGAAGAAGATGGAATTACAGAAGAA
AAAGAGAGGACTCTTGCAGAAACAAGTGGAGCAACAGAAATTACTGCTTGCAAAGTTGGA
TTCAAACAAGAATATGTCTCCCAAAGAAAGGCTTGAACTTATCAAGACCCTGAAAGCTTT
AACAAGTTCAACTGATATTATACGCCACGAGAAACCATCAAAAGTTGAAGTTGCTATTAA
ACAAAGCCAGAAACAGAAGGACTTACTTGACGCCGAGTTAGATCTTTACAATGCTTCAAC
AAACGGAGAAAACACGGTTTCATTGAAACAAAAGTTAAACCAGTTGAAAGTTGAGGCTAA
GACAATGGGTATTGTGACGGGATACAGAGGAGGGTGGAGTCGTGGAAGAGGAGGATCCCG
GATGTCATCCCGAGGAAACCATCATCGTTTTATCCGATCTGGAGCAAATCTTGATCGACG
CCCGTGCGAGATACGTGTGTCCGGGTTTCAGGACACAGAGAAAGATGAAATGATTGCTCA
TTTTTCTGAGTTTGGTGAAATAGACACCTTAACATATGATGAAGAAGGAATAACATGCGC
TATTAAATATAAAGCAAGACAAGATGCTGAGCATGCTGCATCAAACGGAGCTTCATTTAA
AGGAAGGAATTTAATCATAGTGTGGACTTCACAATCTAAACCAAACCAGAGGGATTTTAC
AGCTTCCTCTGACAATGGTGGTTCTGTTGAAAAAGTTGAAGCTACGATAAAAAGTGAGGT
TGGTGTTGCTGCTGGAAATGATGAGGATGACAACGATGATGACGACGAAGACAATATCTC
CGTTGTTGTGGACCGTGTCGAGCCGTTTACTCCTCCCCAGGATGATTACGGATACCCGAT
CCTTGAAGAGGAGCTAGATGAGGAGGCTTTGTTGACTGGAGGAGACATAGATGATGATGA
TGATGTTGTTTCAGAAGAAAGATCGTGGAGGCATTGATATCTTCTCAAGTTTTATGTCCG
GATGTTGGTTGTATGCTACTAGAGACCAAAGACTAGTTCATCTGCGCTGAATATTTTCCA
CTAGGCAAAAAGTTGCACTGTTGGGTTTGGATATTTCTTTCTGTGACGCTGCAGCAAAAT
TGCGATTTGTGATTTAATTCTTCTCGTTCAAGGAACAGTATAAAATGATTTTAAAATTAG
ACAATAAATCGCTTGTTGTCAGGTGGAAAATGAGTTATCTTTAAAGCCATGATCAGATTT
TGCCAATTGCATAACTTAACTTTCATATACACCCAGAAAAGGAAGCTAATATACTGTTGT
AGCAG
| Pfam |
PWI_dom (IPR002483) - T[30-99] 1.3E-9 |
| SUPERFAMILY |
Znf_CCCH_sf (IPR036855) - T[242-270] 3.01E-5 |
| SMART |
Znf_CCCH (IPR000571) - T[242-269] 0.0043 |
| ProSiteProfiles |
Znf_CCCH (IPR000571) - T[242-270] 14.624 |
| Gene3D |
Nucleotide-bd_a/b_plait_sf (IPR012677) - T[390-504] 1.9E-11 - T[731-799] 6.9E-9 |
| SUPERFAMILY |
RBD_domain_sf (IPR035979) - T[404-492] 5.97E-13 - T[729-804] 1.63E-8 |
| ProSiteProfiles |
RRM_dom (IPR000504) - T[410-494] 10.224 |
| SMART |
RRM_dom (IPR000504) - T[411-480] 7.5E-7 - T[734-798] 0.25 |
| Pfam |
RRM_dom (IPR000504) - T[412-476] 1.9E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RBM26_HUMAN | 29.769 % | 214 | 7.6E-58 |
| RBM27_HUMAN | 34.921 % | 141 | 3.82E-34 |
