Aniseed - Transcript Card

Sequences

Amino acid sequence

Length: 1,042

>KH.C14.349.v1.A.SL1-1
NMAEPLRNKRSQSDDLSEIPKAKISKTSVEETEENTASKKFEIEPEIVENQQNKSTISGQ
ENKTVPVTPLETSEENSEPSTSKAKPEEAKEGFCFKCKLSYRDKNPLLLGCLHTFCSRCI
LTNEYFKLNAAPSTPNQPQKQPDGSQKPTTSTENHVGEENQKALPEEGCSSINDLKKHAY
SNQISLSKLIVTCPQCGCNSQARVVTNNLFVLKEKDPTETTIRYCTNCEESAIAVRHCEE
CEEDLCEQCVTAHKRVKLTKEHILKSILDTELESAPNPHNYCSKHCTEQLKLFCETCNQL
TCRDCQLEFHRDHKYQFVQEAANSLRKVMQTMSQKLDEKNAYLKQTTVNVKATLDKVNKR
NEEVTQDVLKFHNQLQELITNKSQFFLRKIDDITTQRRNKLTTQLAMTDRLNRAVEHCIS
FINQAMDDRNGTALLHSKQVVSIALLRYACPHCLPMLGAYAIQPLPITKYTYRPTRVNMG
MGQPQTSNINMNSNGRQDNYNQRRGGVNLNISPVNHSIPHQQPQQQQPQQQHQQQQHQQQ
QYNMGNMNRMKPFVSRASVANMKQTAVNHGPIERSHSHNAMHEHDPPTLHSPLKPNLTVT
PPPHPSFMGEVASMVNNDVIPVLQMPTLNEKKQDPPHQSPESITHAVQSPSLSSADSGFE
TGLNRNNDQNNLPKPDTEDHLSPPPLLDFSELIKQEAIEEDEDMKYFDDKHETSVEEMVM
SLAQEQQKEIPKTLTTPTTSPNTKAKMGETSHFSEWNNFTENNMRKYDPNEDWCGVCNNG
GDLLCCDSCPKVFHVHCHVPEILAAPPGIWQCMLCRDLDAAVEMEMGPGKRKRVMGLQGK
PLKLCERILLELFCHSKSSPFHFPVKNSVPNYYKLIKEPMDFLKIKKKLQPGNFQHYAGC
EKFLSDVYLVFTNCYLFNGEDTSLGRAAKEVQKYFYERVQLWLPFLKLNLDRLEEDQRQI
ITEAVNKQVVANEKPKPTSTDKSKPHIPYEHDSPWKPGQDETEEDDDVIESTPSSDVSEE
QTDLTDESRRRKQSKSGIVHIK

Nucleotide sequence

Length: 3,487

>KH2012:KH.C14.349.v1.A.SL1-1
TTGTAGTCTCCGTTTTAGAGTTAATTCCTGAAATTTTAACTTTGACACTATAGGCTATGC
ATCTGCATTCTGTGCGTAAATACCATCCATAGATGAGCCTAAATGTAATTTTCTGTAAAT
ATCAACTCTCAAGCTAAAATATGGCTGAGCCTTTACGAAACAAACGTTCGCAAAGTGACG
ATTTAAGTGAAATTCCTAAAGCAAAAATATCAAAAACTAGTGTGGAGGAAACAGAAGAAA
ACACCGCTTCAAAAAAATTCGAAATTGAACCTGAAATTGTAGAAAATCAGCAGAATAAGT
CAACTATATCGGGCCAGGAGAATAAAACAGTCCCTGTAACACCTTTAGAAACTTCTGAGG
AAAATAGTGAACCTTCTACAAGTAAAGCTAAACCAGAAGAGGCAAAAGAAGGGTTCTGCT
TCAAGTGCAAGCTATCCTATAGGGACAAAAACCCACTACTTCTTGGATGTTTACACACGT
TTTGTTCAAGGTGTATTTTGACAAATGAATATTTTAAACTTAATGCTGCCCCAAGTACAC
CAAATCAACCTCAGAAACAGCCCGACGGTTCACAAAAGCCAACAACTTCTACTGAAAATC
ATGTTGGAGAAGAGAATCAAAAAGCTCTGCCAGAAGAAGGCTGCTCAAGTATAAATGACC
TGAAAAAGCATGCATATTCAAACCAAATCTCTCTCTCAAAGTTGATCGTAACTTGTCCTC
AGTGTGGCTGCAACAGCCAAGCTAGGGTAGTGACAAACAATTTGTTTGTTCTAAAGGAAA
AAGACCCAACAGAAACCACAATTCGTTATTGCACAAACTGTGAAGAATCTGCTATTGCTG
TTCGCCATTGTGAAGAATGTGAAGAAGACCTCTGTGAACAATGTGTCACCGCTCACAAGC
GTGTAAAGCTGACTAAGGAACATATTCTGAAGTCTATACTTGATACTGAACTAGAATCTG
CACCAAATCCTCATAACTACTGTAGCAAACACTGCACCGAGCAATTGAAGTTATTTTGTG
AGACCTGTAACCAACTTACATGCAGAGATTGCCAGCTTGAATTTCATAGAGACCATAAGT
ACCAATTTGTCCAAGAAGCAGCAAACAGTTTAAGAAAAGTGATGCAAACTATGAGTCAAA
AACTAGACGAAAAGAATGCTTATCTAAAACAAACGACAGTTAATGTCAAAGCTACACTGG
ATAAAGTGAACAAAAGGAATGAAGAAGTCACGCAAGATGTGCTTAAGTTTCATAATCAGT
TACAGGAACTAATTACAAACAAATCGCAATTTTTTCTCCGAAAAATTGATGATATAACAA
CGCAACGACGAAATAAATTGACAACACAGCTTGCCATGACAGATAGATTAAATAGGGCAG
TTGAACACTGTATCAGCTTTATTAATCAAGCAATGGATGATAGAAATGGAACTGCATTGT
TACATTCCAAGCAAGTCGTAAGTATAGCCCTACTAAGGTATGCCTGCCCACATTGCCTCC
CCATGTTGGGTGCCTATGCTATACAACCACTACCTATAACCAAGTATACCTACAGGCCAA
CCAGGGTAAACATGGGAATGGGCCAACCACAAACTAGCAACATCAATATGAACTCAAATG
GACGACAAGATAATTATAACCAACGTAGGGGTGGGGTCAATCTGAATATTAGTCCAGTCA
ATCATTCTATACCTCATCAACAACCTCAGCAACAACAACCTCAACAACAACATCAACAAC
AACAACATCAACAACAGCAATATAACATGGGAAATATGAATCGTATGAAGCCTTTTGTAT
CTCGGGCTTCTGTTGCAAATATGAAGCAAACTGCAGTTAATCATGGTCCTATAGAGAGAT
CCCATAGCCATAATGCAATGCATGAACATGACCCTCCAACATTACATTCCCCTTTAAAAC
CGAACCTTACTGTCACCCCACCACCCCACCCCTCATTCATGGGGGAAGTCGCTTCCATGG
TGAACAATGATGTCATCCCAGTGCTACAGATGCCAACATTAAACGAGAAGAAGCAAGACC
CTCCACACCAGTCTCCAGAGAGCATTACACACGCAGTACAATCACCCAGCTTATCAAGTG
CTGATAGCGGCTTCGAAACTGGATTAAACCGGAATAATGACCAGAACAATTTGCCGAAAC
CTGACACAGAAGATCATCTCTCACCCCCTCCTCTCCTCGACTTCTCCGAACTCATCAAGC
AAGAAGCAATCGAAGAGGATGAAGACATGAAATACTTTGATGATAAACATGAAACCAGTG
TTGAAGAAATGGTAATGTCTTTGGCTCAAGAGCAACAAAAAGAAATCCCAAAAACTTTGA
CAACCCCAACTACTAGTCCTAATACTAAAGCTAAAATGGGTGAAACTTCCCATTTTTCCG
AATGGAACAATTTTACCGAAAACAACATGAGAAAATATGATCCAAATGAAGATTGGTGTG
GTGTATGCAACAATGGTGGCGACTTACTATGTTGCGACAGCTGCCCCAAAGTATTCCATG
TTCATTGTCATGTACCTGAGATACTGGCTGCTCCTCCTGGTATATGGCAATGTATGTTAT
GTCGGGACTTGGATGCAGCAGTGGAGATGGAGATGGGACCTGGTAAGAGGAAGCGGGTCA
TGGGTTTACAAGGAAAACCATTGAAGTTGTGCGAGCGTATCTTGCTTGAATTATTCTGCC
ATTCAAAGAGTTCCCCGTTTCATTTTCCCGTCAAAAACTCAGTTCCGAATTATTACAAAC
TCATAAAGGAGCCGATGGACTTCCTGAAAATCAAAAAAAAGCTTCAGCCTGGGAACTTTC
AGCATTATGCTGGCTGTGAAAAGTTTTTATCAGATGTCTATCTTGTGTTTACTAACTGCT
ACCTTTTTAACGGGGAAGACACCAGTCTTGGTCGAGCTGCCAAAGAAGTTCAAAAATATT
TTTATGAACGTGTCCAATTATGGCTGCCATTTTTGAAGTTGAACTTAGACCGTTTGGAAG
AAGACCAACGACAAATAATTACCGAGGCAGTTAATAAACAAGTAGTAGCAAACGAAAAAC
CCAAGCCCACATCAACGGACAAATCCAAGCCACACATTCCATACGAACACGACTCGCCTT
GGAAACCAGGACAAGACGAAACAGAAGAGGACGATGACGTCATTGAAAGTACGCCGTCGA
GTGACGTCAGCGAGGAACAAACAGACCTCACTGACGAATCTCGACGAAGAAAACAAAGCA
AAAGTGGAATTGTGCACATTAAGTGATCTAAGGACATTTGCCGAAACATGTATCAAAAAT
CGACCTATATTTTCACAACACTAAATTTTATTAAGACGCACTTTTCTATATTTTGGTTCT
GTGAAGCCGTATCTATATTTTGTCACAAACTACACATTTTACCATTTGCCCGTTGTTGTT
ATATTATTTGCAGTTAAAGCGTTTATTTGTTTTCTACCAAATGTTTCTTAAATATATATC
GCCATTG

InterProScan

SMART	Znf_RING (IPR001841) - T[94-196] 4.7E-4
ProSitePatterns	Znf_RING_CS (IPR017907) - T[111-120] .
ProSiteProfiles	Znf_B-box (IPR000315) - T[220-267] 9.215 - T[277-318] 11.348
SMART	Znf_B-box (IPR000315) - T[220-267] 0.0024 - T[277-318] 8.0E-5
Pfam	Znf_B-box (IPR000315) - T[278-316] 7.8E-7
CDD	Znf_B-box (IPR000315) - T[281-318] 3.93144E-10
SMART	Bbox_C (IPR003649) - T[325-451] 5.3E-5
SUPERFAMILY	Znf_FYVE_PHD (IPR011011) - T[764-817] 1.95E-13
Gene3D	Bromodomain-like_sf (IPR036427) - T[770-950] 4.6E-51
ProSiteProfiles	Znf_PHD-finger (IPR019787) - T[771-818] 9.294
SMART	Znf_PHD (IPR001965) - T[773-816] 9.3E-10
ProSitePatterns	Zinc_finger_PHD-type_CS (IPR019786) - T[774-815] .
SUPERFAMILY	Bromodomain-like_sf (IPR036427) - T[828-944] 3.66E-28
SMART	Bromodomain (IPR001487) - T[838-944] 3.2E-23
Pfam	Bromodomain (IPR001487) - T[845-929] 9.7E-17
ProSiteProfiles	Bromodomain (IPR001487) - T[853-925] 16.032
PRINTS	Bromodomain (IPR001487) - T[869-885] 2.2E-7 - T[906-925] 2.2E-7