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TRANSCRIPT CARD

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  1. Transcript 'KH2012:KH.C11.385.v1...' > 
  2. Transcript 'Cisavi.CG.ENS81.R16....' > 
  3. Transcript 'KH2012:KH.C1.1022.v1...' > 
  4. Transcript 'KH2012:KH.C14.312.v3...'

Transcript Model

Transcript Id

KH2012:KH.C14.312.v3.B.SL2-2

Possible name(s)

LDB3; PDLIM1; PDLIM3

Gene model

KH2012:KH.C14.312

Location

KhC14 [387,545 / 394,341]

Sequences

Amino acid sequence

Length: 145

>KH.C14.312.v3.B.SL2-2
ESQQVKMAPPRVQNSVTLFGSAPWGFRLSGGKEFNQPLVITRITPGSVAARSGLTSGDVL
VAVNGLFVTEMTQDQCEVKIKQAVGSIQLVVEKNAAAVSQNSSGEITMDADRSIYVQGGP
THNRTGQSGTATRPMKVPISVVRRK

Nucleotide sequence

Length: 1,261

>KH2012:KH.C14.312.v3.B.SL2-2
GAATCACAGCAGGTTAAGATGGCTCCACCACGGGTTCAGAATTCTGTTACTTTGTTTGGA
TCTGCACCATGGGGTTTCAGATTATCTGGAGGAAAGGAATTCAACCAACCATTAGTTATT
ACACGGATTACACCTGGAAGTGTAGCAGCACGATCTGGCTTGACTTCTGGTGATGTATTG
GTCGCTGTAAACGGTCTGTTTGTTACTGAAATGACTCAGGATCAATGTGAGGTTAAAATA
AAGCAAGCAGTTGGATCAATTCAACTCGTTGTTGAAAAAAATGCTGCAGCTGTGTCTCAA
AACTCATCTGGTGAGATAACCATGGATGCTGACAGAAGTATTTATGTACAAGGCGGGCCA
ACACATAATAGAACAGGACAAAGTGGAACTGCAACAAGACCTATGAAAGTACCTATAAGC
GTCGTTCGTAGAAAATGAAAATTGATTGGAAAATATACTTAAGAACTGGAATTTTATTGC
ACCTTAAATACTATGTTTCGGTTAAAGTGTATGTTTGTATTTAAAAACACAGACTGAAAC
CGGATAGAATATCTTCGAAACACAAAACTGCAAGTGTTTTTATAAGTCTATTATTTATAC
TCTTGTGTTCATCTCGATCCAACTTGTAAAATTTTCCACCTGAAGAGATGTGACATAATG
CATAAACTATTGCCTATATAAAGTTATGTGTTACAATATACCTTTGTGTATATTCCTGGT
TTTTGTGCTTGCCCACATATAGTAGTTCCGTATGAAGTTATACCATGTAAGTAATACGAG
CCATCGGGGTGTAGACACAGCAAAGGTCCGCCACTGTCACCCTATGTATAGTTAGAACGA
TTGTAAAAACGGTTGAATATGCTGGTGCCTGGTTAGTGGGGTTATGGGTTCAAGGCTTTT
CGCTGCTACTGTACTGTAGGCGAATATATGTCCTTGGGGTATTAACCGCGCTTGCTCTAA
CCCAGCCGTCACTTACGGGTTGTCTAAAAGTCATAAAATCAAAAGTTGGAAAAAAACCTT
TAAAAAGTGGTGTGGTAACTCGTAAGCAGGCAGGAGGTGCGAAACAGAACACTCGTGTTA
TAACGACTATATTTGCCCCGCCACGCGAGGATATATAAGTTACATTCGTGTTGGTAACTC
GTAAGTGGGCACGGGGTGTATGAAACAAAACAGCCGTGCTATACCTACTGTCGCTATCCC
TGTCATGCAAGGATAAATAAGTCACATTACATTAAACTTGTACATTTCAACATTGTCATA
C

InterProScan

SUPERFAMILY
PDZ_sf (IPR036034) - T[16-95] 1.31E-19
ProSiteProfiles
PDZ (IPR001478) - T[20-95] 14.958
Pfam
PDZ (IPR001478) - T[21-92] 9.0E-15
SMART
PDZ (IPR001478) - T[22-95] 7.6E-17

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
LDB3_HUMAN 52.5 % 90.5 5.48E-22
PDLI3_HUMAN 51.899 % 87.8 2.52E-21
PDLI1_HUMAN 35.938 % 80.1 1.14E-18