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  1. Transcript 'KH2012:KH.C14.272.v2...'

Transcript Model

Transcript Id

KH2012:KH.C14.272.v2.A.SL1-3

Possible name(s)

PCF11

Gene model

KH2012:KH.C14.272

Location

KhC14 [3,449,460 / 3,454,260]

Sequences

Amino acid sequence

Length: 411

>KH.C14.272.v2.A.SL1-3
KCPRSSFNMDDVIEEYSSSLQDLTFNSKPHINMLTILAEENKAHAESVVKVIEAQLYKAS
EKLPILYLLDSIVKNVGENYTPLFAKNIVNTFRQAFMTGNEKQKMSLYKLRTTWDEYFPL
KRLHALDVKIQGIDPNWPVKPLPAHLQDASTNIHVNPKFIKRNDTPVVKPQVTPVVSKPS
QSKQVNDVDKIKEQMIRQQKELLDLQQRKLMLELEQTKQELEAKQKEMQSQSIKSEKVPT
SRDPRIKQNPAPKIPVGSLRVTVKNKPMQTAPKEHSIAKDQKLKVNGEPHKVPPRPNKAS
TNLQNKPEPSKIKAAALSKKRSPKNLNKKSKNMISPTERSGAKPKLHQFNKTGMKGLETK
PKMHVKETKKLVKTIKIIWKSVIALFIVIRYIALAVTMYGTFAEAVWICHT

Nucleotide sequence

Length: 1,429

>KH2012:KH.C14.272.v2.A.SL1-3
CGGTAGAATGTGCATGAGTAGTCTATAATTTTGTTAGTTTTCGTGGACCAAGGCCCTTTT
TCGTCAATAAAAGTGCCCGCGGTCCAGTTTCAATATGGACGACGTTATTGAAGAATATTC
GTCGTCATTGCAAGATTTAACCTTCAATTCCAAGCCACATATCAACATGCTAACCATCCT
GGCCGAAGAAAACAAAGCCCATGCTGAGAGTGTCGTCAAAGTTATAGAGGCCCAGTTGTA
TAAGGCATCGGAGAAACTACCAATTCTCTATCTACTTGATTCCATTGTAAAGAATGTGGG
AGAGAACTACACTCCGCTCTTTGCGAAGAACATTGTCAATACCTTCCGTCAAGCATTCAT
GACTGGAAACGAGAAGCAAAAAATGAGTCTTTATAAGTTGCGAACAACATGGGACGAATA
CTTTCCTCTCAAGAGATTACATGCCCTTGATGTAAAGATACAGGGTATTGATCCAAACTG
GCCAGTGAAGCCTTTACCTGCCCACCTTCAAGATGCATCTACCAACATACATGTTAACCC
AAAGTTTATAAAACGAAATGATACACCAGTTGTTAAACCACAAGTCACACCAGTTGTTTC
AAAACCATCTCAATCAAAGCAGGTAAATGATGTTGATAAGATCAAGGAGCAAATGATCCG
ACAGCAGAAGGAACTTCTTGACCTCCAGCAGCGAAAACTGATGCTTGAATTGGAACAAAC
CAAACAAGAACTTGAAGCAAAGCAAAAAGAGATGCAAAGCCAATCAATAAAAAGTGAAAA
AGTTCCAACATCAAGAGACCCAAGAATTAAACAAAATCCAGCTCCTAAAATTCCTGTTGG
TTCCTTGCGTGTCACTGTGAAGAATAAACCAATGCAAACAGCACCAAAGGAACATTCTAT
AGCCAAGGACCAGAAGTTAAAAGTTAATGGGGAACCTCATAAAGTTCCACCAAGGCCAAA
TAAAGCTTCTACAAACCTTCAAAATAAACCAGAACCTTCAAAAATTAAGGCTGCTGCTCT
ATCTAAAAAACGCTCGCCGAAAAATTTAAATAAAAAGTCAAAAAATATGATATCACCGAC
TGAGCGGTCTGGCGCTAAACCTAAATTGCACCAGTTCAATAAAACTGGCATGAAAGGGCT
GGAAACTAAACCAAAGATGCATGTGAAAGAAACAAAGAAATTGGTAAAGACGATTAAAAT
TATTTGGAAGTCTGTAATTGCACTATTTATTGTAATAAGGTATATTGCTTTGGCTGTTAC
CATGTATGGCACATTTGCAGAAGCTGTGTGGATATGCCATACCTGATAATTTTCGGGTTT
TGTGTAAGGTTTTAGTATTATTTTGCTTCGTCATTTGATTAAAGACTTTTGGTTTCGCAC
TCCTTAACAAAACTTCTCCTAACTCTTGGTTTTGCTCTCCCTAACAAAA

InterProScan

Gene3D
ENTH_VHS (IPR008942) - T[6-134] 8.4E-37
ProSiteProfiles
CID_dom (IPR006569) - T[8-134] 29.935
SUPERFAMILY
ENTH_VHS (IPR008942) - T[10-142] 3.34E-37
SMART
CID_dom (IPR006569) - T[11-131] 4.4E-26
Pfam
RNA_pol_II-bd (IPR006903) - T[62-116] 1.2E-8

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
PCF11_HUMAN 55.405 % 218 8.0E-63