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  1. Transcript 'KH2012:KH.C1.426.v1....'

Transcript Model

Transcript Id

KH2012:KH.C1.426.v1.R.ND1-1

Possible name(s)

RNF103; RNF130; RNF167

Location

KhC1 [2,571,227 / 2,575,861]

Sequences

Amino acid sequence

Length: 559

>KH.C1.426.v1.R.ND1-1
ELTTKIFDGLASSYEMFLLKISVVLVYLILVFSVYHLINIFTLNNSEIVGLINAVSSSLK
QIRSLIADGKLSANTNGLANLDMKIESLASKKTSKQTVTGDCYSFNKNDQQDLFDAIQTS
DDVLLIQEGVDLSTPELLFSCHQLQGHHNCVYRWSRCDIEIDWKSKLRRNKSPTYFPFMM
KQGPCFNKQTVSCAVGKINKNKDFCLKRRVSCSLASLGNVQDGIGRKLAIILPSSFKFSD
HKGKNENSKAINLDVNLLFNWSVYICSFLGCLSFFTTQSSFLSRVIAAFQSLITYNFFVL
GTWLLQSGYKINCIQFVANSMLFQLRKLLTKDVIAHLHENWMVLVFGFFVFFTLVVDVLK
RANILGREQEIETTLSEILLNNNRWHSNDGDISQRWVQRLATPSLWLQPLVPMDYISELP
VWRYTGRCVASSDDSDADHCSKEFPRSSKSWYQRQLRSATCSKQGSSCIARSVIRSIRSC
LRSRSPAMRRINNAPDGMREETSCSICLDNYKQHDHVCGLPCGHVFHHSCILSWLHSDQH
CCPICRWPAYQVKSPEQPI

Nucleotide sequence

Length: 1,907

>KH2012:KH.C1.426.v1.R.ND1-1
GGAACTGACAACAAAAATTTTCGATGGGTTAGCGTCAAGTTATGAAATGTTTCTGCTTAA
AATTTCAGTCGTGTTGGTGTACCTGATACTCGTGTTTTCAGTTTACCATCTAATCAACAT
TTTCACATTAAACAACTCGGAAATCGTTGGTTTGATTAATGCTGTGAGTTCAAGTCTTAA
ACAAATACGATCCTTGATTGCTGATGGAAAACTTAGCGCAAACACCAATGGATTGGCCAA
CTTGGATATGAAAATTGAGTCGCTGGCCTCTAAAAAAACGTCAAAACAAACTGTGACAGG
AGACTGTTATTCCTTCAATAAGAACGACCAACAAGATTTATTCGATGCAATTCAAACTTC
AGATGATGTTTTGTTGATTCAGGAAGGTGTCGACTTGTCAACGCCAGAGCTGTTGTTCAG
TTGTCACCAACTGCAAGGACATCACAATTGTGTCTACAGATGGTCAAGATGTGATATTGA
AATAGATTGGAAGTCAAAATTGCGAAGAAATAAGTCTCCTACATACTTCCCTTTCATGAT
GAAACAAGGCCCATGTTTTAATAAACAAACAGTCAGCTGTGCTGTGGGGAAAATCAACAA
AAATAAGGATTTCTGTTTAAAACGTCGTGTCTCTTGCAGTTTAGCATCACTTGGTAATGT
CCAAGACGGAATTGGTAGAAAACTTGCCATTATTCTCCCATCTTCTTTCAAATTTTCTGA
CCACAAGGGGAAAAACGAGAATTCAAAAGCCATAAATTTAGATGTGAACTTGCTTTTCAA
CTGGAGCGTGTATATTTGTAGTTTTCTTGGGTGCTTGTCGTTCTTCACAACGCAAAGTAG
CTTTCTAAGTCGGGTTATAGCAGCGTTTCAATCCCTAATTACTTACAATTTTTTCGTACT
CGGTACATGGTTGCTACAGTCTGGCTATAAAATTAATTGTATTCAGTTTGTGGCCAATTC
TATGCTCTTCCAATTGCGAAAACTTCTCACAAAGGATGTTATCGCGCACCTACATGAGAA
TTGGATGGTTTTAGTTTTCGGATTTTTTGTGTTTTTTACTCTGGTAGTAGATGTGTTAAA
AAGGGCAAATATTCTCGGGAGAGAGCAAGAAATTGAAACCACGCTTAGTGAGATATTGCT
AAACAACAATCGATGGCATTCAAATGACGGAGACATTTCTCAGCGTTGGGTGCAAAGACT
AGCAACTCCTAGTTTATGGCTCCAACCCCTGGTGCCTATGGATTACATAAGTGAACTTCC
AGTGTGGAGGTATACTGGGCGGTGTGTGGCCAGTTCTGATGATTCTGACGCTGATCACTG
CTCTAAGGAGTTCCCCAGGTCTAGCAAAAGTTGGTACCAGCGTCAACTAAGATCTGCAAC
TTGTTCAAAACAAGGTTCGAGCTGTATAGCCAGAAGTGTAATCAGATCCATTCGTTCATG
TTTAAGAAGCAGAAGTCCTGCTATGCGACGAATAAACAACGCTCCCGACGGTATGAGAGA
AGAAACAAGCTGTAGCATTTGTTTGGATAACTACAAACAACATGACCATGTATGTGGATT
GCCTTGTGGACACGTTTTTCATCATTCTTGTATTTTGTCATGGCTCCACAGTGATCAACA
CTGTTGTCCAATATGCAGATGGCCGGCTTACCAAGTCAAGTCCCCAGAACAACCAATTTA
ATCTAACCTTTACTTTGTCCTGTATTTACTGTTCTATCCATTTCCTGTAGTTAAAAAGAA
ATCTTTTCTAATAAATACTGTTTATTTGCACCGTATAACAACACTAGCACTTCTAGTAAC
AATAAATTTCCCGCTTTATTCAGAACAATAAAAAGTTAACTGCATCTTAAATAATTAATG
AAAAAATGTTTTTTGTTTTAAGAAATAAATTCTACATTGTGTTGGAA

InterProScan

Gene3D
Znf_RING/FYVE/PHD (IPR013083) - T[491-557] 1.2E-15
Pfam
Znf_RING (IPR001841) - T[503-546] 9.1E-12
SMART
Znf_RING (IPR001841) - T[504-545] 9.0E-6
ProSiteProfiles
Znf_RING (IPR001841) - T[504-546] 13.374

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
RN103_HUMAN 26.166 % 124 5.5E-30