Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C1.426.v1.A.nonSL2-1

Possible name(s)

RNF103; RNF130; RNF167

Gene model

KH2012:KH.C1.426

Location

KhC1 [2,571,207 / 2,575,861]

Sequences

Amino acid sequence

Length: 566

>KH.C1.426.v1.A.nonSL2-1
KTKISQKELTTKIFDGLASSYEMFLLKISVVLVYLILVFSVYHLINIFTLNNSEIVGLIN
AVSSSLKQIRSLIADGKLSANTNGLANLDMKIESLASKKTSKQTVTGDCYSFNKNDQQDL
FDAIQTSDDVLLIQEGVDLSTPELLFSCHQLQGHHNCVYRWSRCDIEIDWKSKLRRNKSP
TYFPFMMKQGPCFNKQTVSCAVGKINKNKDFCLKRRVSCSLASLGNVQDGIGRKLAIILP
SSFKFSDHKGKNENSKAINLDVNLLFNWSVYICSFLGCLSFFTTQSSFLSRVIAAFQSLI
TYNFFVLGTWLLQSGYKINCIQFVANSMLFQLRKLLTKDVIAHLHENWMVLVFGFFVFFT
LVVDVLKRANILGREQEIETTLSEILLNNNRWHSNDGDISQRWVQRLATPSLWLQPLVPM
DYISELPVWRYTGRCVASSDDSDADHCSKEFPRSSKSWYQRQLRSATCSKQGSSCIARSV
IRSIRSCLRSRSPAMRRINNAPDGMREETSCSICLDNYKQHDHVCGLPCGHVFHHSCILS
WLHSDQHCCPICRWPAYQVKSPEQPI

Nucleotide sequence

Length: 1,927

>KH2012:KH.C1.426.v1.A.nonSL2-1
AAAACAAAGATTTCGCAGAAGGAACTGACAACAAAAATTTTCGATGGGTTAGCGTCAAGT
TATGAAATGTTTCTGCTTAAAATTTCAGTCGTGTTGGTGTACCTGATACTCGTGTTTTCA
GTTTACCATCTAATCAACATTTTCACATTAAACAACTCGGAAATCGTTGGTTTGATTAAT
GCTGTGAGTTCAAGTCTTAAACAAATACGATCCTTGATTGCTGATGGAAAACTTAGCGCA
AACACCAATGGATTGGCCAACTTGGATATGAAAATTGAGTCGCTGGCCTCTAAAAAAACG
TCAAAACAAACTGTGACAGGAGACTGTTATTCCTTCAATAAGAACGACCAACAAGATTTA
TTCGATGCAATTCAAACTTCAGATGATGTTTTGTTGATTCAGGAAGGTGTCGACTTGTCA
ACGCCAGAGCTGTTGTTCAGTTGTCACCAACTGCAAGGACATCACAATTGTGTCTACAGA
TGGTCAAGATGTGATATTGAAATAGATTGGAAGTCAAAATTGCGAAGAAATAAGTCTCCT
ACATACTTCCCTTTCATGATGAAACAAGGCCCATGTTTTAATAAACAAACAGTCAGCTGT
GCTGTGGGGAAAATCAACAAAAATAAGGATTTCTGTTTAAAACGTCGTGTCTCTTGCAGT
TTAGCATCACTTGGTAATGTCCAAGACGGAATTGGTAGAAAACTTGCCATTATTCTCCCA
TCTTCTTTCAAATTTTCTGACCACAAGGGGAAAAACGAGAATTCAAAAGCCATAAATTTA
GATGTGAACTTGCTTTTCAACTGGAGCGTGTATATTTGTAGTTTTCTTGGGTGCTTGTCG
TTCTTCACAACGCAAAGTAGCTTTCTAAGTCGGGTTATAGCAGCGTTTCAATCCCTAATT
ACTTACAATTTTTTCGTACTCGGTACATGGTTGCTACAGTCTGGCTATAAAATTAATTGT
ATTCAGTTTGTGGCCAATTCTATGCTCTTCCAATTGCGAAAACTTCTCACAAAGGATGTT
ATCGCGCACCTACATGAGAATTGGATGGTTTTAGTTTTCGGATTTTTTGTGTTTTTTACT
CTGGTAGTAGATGTGTTAAAAAGGGCAAATATTCTCGGGAGAGAGCAAGAAATTGAAACC
ACGCTTAGTGAGATATTGCTAAACAACAATCGATGGCATTCAAATGACGGAGACATTTCT
CAGCGTTGGGTGCAAAGACTAGCAACTCCTAGTTTATGGCTCCAACCCCTGGTGCCTATG
GATTACATAAGTGAACTTCCAGTGTGGAGGTATACTGGGCGGTGTGTGGCCAGTTCTGAT
GATTCTGACGCTGATCACTGCTCTAAGGAGTTCCCCAGGTCTAGCAAAAGTTGGTACCAG
CGTCAACTAAGATCTGCAACTTGTTCAAAACAAGGTTCGAGCTGTATAGCCAGAAGTGTA
ATCAGATCCATTCGTTCATGTTTAAGAAGCAGAAGTCCTGCTATGCGACGAATAAACAAC
GCTCCCGACGGTATGAGAGAAGAAACAAGCTGTAGCATTTGTTTGGATAACTACAAACAA
CATGACCATGTATGTGGATTGCCTTGTGGACACGTTTTTCATCATTCTTGTATTTTGTCA
TGGCTCCACAGTGATCAACACTGTTGTCCAATATGCAGATGGCCGGCTTACCAAGTCAAG
TCCCCAGAACAACCAATTTAATCTAACCTTTACTTTGTCCTGTATTTACTGTTCTATCCA
TTTCCTGTAGTTAAAAAGAAATCTTTTCTAATAAATACTGTTTATTTGCACCGTATAACA
ACACTAGCACTTCTAGTAACAATAAATTTCCCGCTTTATTCAGAACAATAAAAAGTTAAC
TGCATCTTAAATAATTAATGAAAAAATGTTTTTTGTTTTAAGAAATAAATTCTACATTGT
GTTGGAA

InterProScan

Gene3D	Znf_RING/FYVE/PHD (IPR013083) - T[498-564] 1.2E-15
Pfam	Znf_RING (IPR001841) - T[510-553] 9.3E-12
ProSiteProfiles	Znf_RING (IPR001841) - T[511-553] 13.374
SMART	Znf_RING (IPR001841) - T[511-552] 9.0E-6

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RN103_HUMAN	26.166 %	124	5.13E-30