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TRANSCRIPT CARD

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  1. Clone 'cigd008e11' > 
  2. Transcript 'Cisavi.CG.ENS81.R30....' > 
  3. Clone 'cien53713' > 
  4. EST 'AHC0AAA223YK18_RM1' > 
  5. Transcript 'KH2012:KH.C1.425.v2....'

Transcript Model

Transcript Id

KH2012:KH.C1.425.v2.A.ND4-1

Possible name(s)

ARIH2; RNF144A; RNF144B

Gene model

KH2012:KH.C1.425

Location

KhC1 [3,196,769 / 3,203,032]

Sequences

Amino acid sequence

Length: 336

>KH.C1.425.v2.A.ND4-1
LVLLLDFLKAQPTFMQCMRTYVEVLIRDGVVISISCPDSNCETGGIISCDEIEFLSQPDT
YKKYKRLKFEQEVATDPRRTFCPQVSCSTVCHVCNNSGSSVSTAPTEAVPVQCPTCHLMF
CYICKAEWKPSHKCNDYTRSFGSELQKLQNRTGFSLSGPNEPIKRCPVCNILIEKDRGCA
QMICKNCSHVFCWYCLKLLDNDFMLRHYDKGPCRNMLGHSRAQVFQHRIGIVGLFTAFSL
LLLVASPVLILAAPVILCCKCKECCQQAINRAHQHRGSVELQMNDRTSRQAAHRGNRQDD
IEQGVITVEMSNTNLSHNPHQNEASTSNRTVLDFGT

Nucleotide sequence

Length: 1,737

>KH2012:KH.C1.425.v2.A.ND4-1
GTTTTAATGAAGACACATTAAAAAATCTGTTAATTAACTTTTAACTATTAATTGTTTTTG
GCAACAACAATTTTAGGTGTTACTGTATTAGTATTGCATAAATTTATTAGCTTGTTTTAC
TGCTTGATTTTCTTAAAGCTCAACCAACTTTTATGCAGTGTATGCGAACATATGTTGAAG
TTCTAATTCGCGATGGTGTTGTGATATCAATATCATGCCCAGACTCCAACTGTGAGACAG
GCGGCATCATAAGTTGTGATGAGATTGAATTTCTCAGTCAACCAGATACTTACAAAAAAT
ACAAACGTTTAAAATTTGAACAAGAAGTGGCAACAGATCCAAGGCGTACATTCTGCCCCC
AGGTTTCGTGCTCCACTGTTTGTCATGTTTGCAATAATTCTGGTTCATCAGTTTCAACAG
CACCCACAGAAGCAGTGCCTGTACAATGCCCCACTTGTCATCTTATGTTCTGCTACATTT
GCAAAGCAGAGTGGAAGCCAAGCCACAAATGCAACGATTACACTCGAAGTTTTGGCAGTG
AATTACAAAAACTACAGAACAGAACTGGCTTTTCATTAAGTGGTCCAAATGAACCAATTA
AACGGTGCCCAGTGTGCAACATCTTGATTGAAAAGGACAGAGGATGTGCGCAGATGATTT
GCAAGAATTGCAGCCACGTTTTCTGCTGGTATTGCTTAAAACTTCTTGATAATGACTTTA
TGCTACGACACTATGACAAAGGACCATGTAGGAACATGCTTGGACATAGCAGAGCACAAG
TGTTTCAACACAGAATTGGGATTGTTGGTTTGTTCACAGCATTTTCTTTACTTCTCCTTG
TTGCCTCCCCTGTTTTAATTCTTGCAGCACCAGTTATTCTCTGCTGTAAGTGCAAAGAAT
GTTGTCAACAGGCCATAAATCGTGCGCACCAACACCGAGGTTCTGTGGAATTACAAATGA
ATGACAGGACTTCACGGCAGGCAGCTCACAGGGGAAACAGACAAGATGACATTGAACAAG
GTGTAATTACTGTGGAGATGTCAAACACGAACTTAAGTCACAATCCCCATCAAAATGAGG
CTTCTACCAGTAACAGAACTGTATTAGATTTTGGTACGTAGGTGGCAACACCTTCACCAT
GCATTTGTTGATATGTTTAATAGTAAATACTGTTCTTTTTGTCTTTGTATAAGCTTTTCA
CTTTAGCAGCCAAGCTGCCTAATCATTACAATCCTAATTACAGCAGTTAATCACTAGAAA
TGATTTCAAATGCACCCAATTTTGATCGTACTTCACCCAATGTGTTTGAAGTAAATTTCT
ACTTCTAAATCTTTACTGATGCCATCAAAGATACATGGTATGGTACTGTGGGGGAAGGTG
GGACACCTTTAGCACATAATATCTTAATGTCCTGATCGTATTTTAAACAATTAACAACGG
TCAATGAAAGTCGTGGTGATACAGTTTTATAATTCTTTAAACGTTAATCGTTTACTACCA
AATGAGACGATAAAGTAGAATGAAAAGGTGTCCCATCTCCCCCCACCCTACTATATAATA
AGTACCATTTAACCATTACAACAGTCCCCTATTTTGATTTCAATTGGAAGTACTCTGACT
CTGCTGTGCAACTGTCAAGGTGCTCTTACCAGTATACATTCACACCACTATGCTTTGCAC
ATTCTGTCTTTTCACGCTTAAAGCAGTGAATCGGTGAATACTGTTACTAAATTTACA

InterProScan

Gene3D
Znf_RING/FYVE/PHD (IPR013083) - T[13-77] 3.5E-10
PANTHER
E3_UB_ligase_RBR (IPR031127) - T[15-261] 3.5E-91
Pfam
IBR_dom (IPR002867) - T[62-134] 7.8E-10 - T[160-198] 1.7E-7
SMART
IBR_dom (IPR002867) - T[62-134] 7.5E-8 - T[146-213] 0.45
ProSitePatterns
Znf_RING_CS (IPR017907) - T[187-196] .

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
R144A_HUMAN 48.374 % 250 4.28E-82
R144B_HUMAN 46.774 % 233 5.44E-75