- Transcript 'KH2012:KH.C14.209.v1...' >
- Transcript 'KH2012:KH.C1.425.v1....'
Transcript Model
Transcript Id
KH2012:KH.C1.425.v1.A.SL3-1
Possible name(s)
ARIH2; RNF144A; RNF144B
Gene model
Location
KhC1 [3,196,769 / 3,204,397]
Amino acid sequence
Length: 400
>KH.C1.425.v1.A.SL3-1
INMDLNTKEDAGCSREDRSSVSSTSETMPLSHYDCDCIKQPDAAVKCEDIPSLCKLCLED
GVKLEDMIVLKSCGCAFCLQCMRTYVEVLIRDGVVISISCPDSNCETGGIISCDEIEFLS
QPDTYKKYKRLKFEQEVATDPRRTFCPQVSCSTVCHVCNNSGSSVSTAPTEAVPVQCPTC
HLMFCYICKAEWKPSHKCNDYTRSFGSELQKLQNRTGFSLSGPNEPIKRCPVCNILIEKD
RGCAQMICKNCSHVFCWYCLKLLDNDFMLRHYDKGPCRNMLGHSRAQVFQHRIGIVGLFT
AFSLLLLVASPVLILAAPVILCCKCKECCQQAINRAHQHRGSVELQMNDRTSRQAAHRGN
RQDDIEQGVITVEMSNTNLSHNPHQNEASTSNRTVLDFGT
Nucleotide sequence
Length: 1,936
>KH2012:KH.C1.425.v1.A.SL3-1
AATAATTATACAAACAGAATATAAATATAATACCTGTAAGTTTTTACCAAACAAATTAAA
ATCCGGACTTATCCATTTAAAGCTGCCTATGTTGTATTAATAAATTATCAAAGATAAATT
AACATGGATTTAAACACAAAAGAAGATGCTGGATGCTCTCGTGAAGACCGTTCTTCTGTA
TCAAGTACATCGGAGACAATGCCACTCAGTCATTATGACTGTGATTGTATAAAACAACCA
GATGCCGCTGTAAAGTGTGAAGACATTCCAAGTCTTTGTAAACTCTGCTTAGAAGATGGA
GTGAAATTGGAAGACATGATTGTCCTTAAATCTTGTGGCTGCGCATTCTGTTTACAGTGT
ATGCGAACATATGTTGAAGTTCTAATTCGCGATGGTGTTGTGATATCAATATCATGCCCA
GACTCCAACTGTGAGACAGGCGGCATCATAAGTTGTGATGAGATTGAATTTCTCAGTCAA
CCAGATACTTACAAAAAATACAAACGTTTAAAATTTGAACAAGAAGTGGCAACAGATCCA
AGGCGTACATTCTGCCCCCAGGTTTCGTGCTCCACTGTTTGTCATGTTTGCAATAATTCT
GGTTCATCAGTTTCAACAGCACCCACAGAAGCAGTGCCTGTACAATGCCCCACTTGTCAT
CTTATGTTCTGCTACATTTGCAAAGCAGAGTGGAAGCCAAGCCACAAATGCAACGATTAC
ACTCGAAGTTTTGGCAGTGAATTACAAAAACTACAGAACAGAACTGGCTTTTCATTAAGT
GGTCCAAATGAACCAATTAAACGGTGCCCAGTGTGCAACATCTTGATTGAAAAGGACAGA
GGATGTGCGCAGATGATTTGCAAGAATTGCAGCCACGTTTTCTGCTGGTATTGCTTAAAA
CTTCTTGATAATGACTTTATGCTACGACACTATGACAAAGGACCATGTAGGAACATGCTT
GGACATAGCAGAGCACAAGTGTTTCAACACAGAATTGGGATTGTTGGTTTGTTCACAGCA
TTTTCTTTACTTCTCCTTGTTGCCTCCCCTGTTTTAATTCTTGCAGCACCAGTTATTCTC
TGCTGTAAGTGCAAAGAATGTTGTCAACAGGCCATAAATCGTGCGCACCAACACCGAGGT
TCTGTGGAATTACAAATGAATGACAGGACTTCACGGCAGGCAGCTCACAGGGGAAACAGA
CAAGATGACATTGAACAAGGTGTAATTACTGTGGAGATGTCAAACACGAACTTAAGTCAC
AATCCCCATCAAAATGAGGCTTCTACCAGTAACAGAACTGTATTAGATTTTGGTACGTAG
GTGGCAACACCTTCACCATGCATTTGTTGATATGTTTAATAGTAAATACTGTTCTTTTTG
TCTTTGTATAAGCTTTTCACTTTAGCAGCCAAGCTGCCTAATCATTACAATCCTAATTAC
AGCAGTTAATCACTAGAAATGATTTCAAATGCACCCAATTTTGATCGTACTTCACCCAAT
GTGTTTGAAGTAAATTTCTACTTCTAAATCTTTACTGATGCCATCAAAGATACATGGTAT
GGTACTGTGGGGGAAGGTGGGACACCTTTAGCACATAATATCTTAATGTCCTGATCGTAT
TTTAAACAATTAACAACGGTCAATGAAAGTCGTGGTGATACAGTTTTATAATTCTTTAAA
CGTTAATCGTTTACTACCAAATGAGACGATAAAGTAGAATGAAAAGGTGTCCCATCTCCC
CCCACCCTACTATATAATAAGTACCATTTAACCATTACAACAGTCCCCTATTTTGATTTC
AATTGGAAGTACTCTGACTCTGCTGTGCAACTGTCAAGGTGCTCTTACCAGTATACATTC
ACACCACTATGCTTTGCACATTCTGTCTTTTCACGCTTAAAGCAGTGAATCGGTGAATAC
TGTTACTAAATTTACA
| PANTHER |
E3_UB_ligase_RBR (IPR031127) - T[4-325] 1.2E-108 |
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[51-141] 4.6E-20 |
| SMART |
Znf_RING (IPR001841) - T[54-103] 0.088 - T[155-198] 4.5 - T[230-325] 0.64 |
| ProSiteProfiles |
Znf_RING (IPR001841) - T[54-101] 8.963 |
| Pfam |
IBR_dom (IPR002867) - T[126-198] 1.0E-9 - T[224-262] 2.3E-7 |
| SMART |
IBR_dom (IPR002867) - T[126-198] 7.5E-8 - T[210-277] 0.45 |
| ProSitePatterns |
Znf_RING_CS (IPR017907) - T[251-260] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ARI2_HUMAN | 27.477 % | 82.4 | 5.25E-17 |
| R144A_HUMAN | 47.619 % | 267 | 1.42E-87 |
| R144B_HUMAN | 46.545 % | 250 | 5.06E-81 |