- Transcript 'Boschl.CG.Botznik201...' >
- Transcript 'KH2012:KH.C14.201.v2...'
Transcript Model
Transcript Id
KH2012:KH.C14.201.v2.A.SL2-2
Possible name(s)
MALRD1; MDGA1; MDGA2
Gene model
Location
KhC14 [3,412,419 / 3,422,543]
Amino acid sequence
Length: 866
>KH.C14.201.v2.A.SL2-2
KQPNIWVFYHCRKIVKFPKMSFRFSVLCFVLHLVKGQLLVNERQECGGEFFTTNGSIYSP
NYSLGNYPPNAQCVWTITVPADKRIQFDFPTMDIEIGPPDCLFDGVAIYDYKADGSKYDL
PLDHLDSLGMTKYCGKSTFSDIISATNKVDVVFTSDESDEASGFHLTWLAVPIPADEFNC
TFETTLCRGWVNLGSLYDEFDWGINSGKTVTAGTGPNFDHTLKNENGSYAYVEASAPQKL
NHRAMLSTPYVNFTAEDTGICVRYWYHMLGENIGTLAVAVESNGTSTIMTSLDGQQSEQW
LQGELQVPKQDLPFRIIFIGVRGGGFRGDIALDDVTLVREPCNYVTETSTEVITITETTE
IATPGQDAETTTAGFVEPPIPTVADCLDNEYKCSSGFSCISQTFVCDGVPDCLDSDDENN
CDDDLTGLPPILTNVNTTQVTITTPQTTTMDKTTIPTLPITTESTSEMVTSSSTPSVTSP
STLSMTSSLATTVSTVAMTSSPMPITTTTTAPMMSSTEQITSSTPVVTSTTQPPTSSHMA
IETTGATTMDRVNATVIFRSTVSPSITSTVASGVCGDDSVACSDGICIPIMWLCDNVEDC
NDAEDELDCPDKESTTWQDYGEYATTDSTLMIPEASTTVFTTDEVQTSTVVISTTQPTMP
TSEATTSQATTTSQPTTTTSHASTTTPQTTTTTSDAITTTSQSTTIASQPTTSQATTTTT
SQPTTTMSEAITTTSQPPTTSKATTTTSQAITTTTSEATTTTSQPIIATSELVTLPPVTE
STTTKIPTTSETTTTVPILITEEPKDKRFTPRPGVEVTDRANVSMVIETDAPSTGKRGSA
SAVQSKSMWILINALVATYVVKVFCR
Nucleotide sequence
Length: 3,073
>KH2012:KH.C14.201.v2.A.SL2-2
GTTACAGAAGAACGATTTAGGAACTGTATACGAAAATTAAATTGTTAAACGGAACGAATT
TTCCATTTTAAAACCTTTTTTGACTATTAATTTAGCACTCAAACTTTAAAAACAGCCTAA
TATTTGGGTATTTTATCATTGCAGGAAAATAGTAAAATTTCCCAAAATGAGTTTTAGGTT
TTCTGTTCTGTGTTTTGTTTTACATTTAGTAAAGGGACAATTGCTGGTCAACGAGAGACA
AGAATGTGGCGGAGAGTTTTTCACGACGAACGGTTCTATATACAGTCCGAACTACTCACT
CGGAAACTACCCCCCAAATGCACAATGTGTGTGGACCATTACTGTACCAGCAGATAAACG
AATCCAATTCGACTTTCCCACAATGGATATTGAAATCGGTCCCCCGGATTGTTTATTCGA
TGGCGTTGCTATCTACGACTACAAAGCAGATGGAAGCAAGTACGATTTACCTCTTGACCA
CCTGGATTCTTTAGGCATGACAAAATACTGCGGAAAATCGACATTTTCAGACATCATCAG
CGCAACTAATAAGGTTGATGTCGTCTTTACTTCAGACGAGAGCGACGAAGCAAGCGGGTT
TCATTTGACATGGCTGGCCGTGCCCATACCAGCAGACGAGTTCAACTGCACATTTGAGAC
AACGCTTTGCAGAGGATGGGTGAATTTAGGTTCACTTTACGATGAGTTTGACTGGGGGAT
TAACTCTGGAAAGACTGTTACCGCTGGCACAGGACCTAACTTTGACCACACACTCAAGAA
CGAAAATGGAAGTTACGCATACGTTGAAGCATCAGCGCCACAGAAGCTAAACCACCGAGC
CATGCTAAGTACACCGTACGTTAACTTTACTGCCGAAGACACCGGAATATGCGTACGATA
CTGGTATCATATGTTGGGTGAAAATATTGGAACACTAGCAGTCGCTGTTGAATCGAACGG
GACAAGTACAATTATGACGTCATTAGACGGGCAACAAAGTGAACAATGGTTGCAGGGCGA
ACTACAAGTGCCAAAACAAGACCTTCCATTCAGGATTATCTTTATCGGTGTACGTGGAGG
CGGTTTTCGCGGCGACATAGCGCTGGATGACGTCACACTTGTTCGTGAACCGTGCAATTA
CGTCACAGAGACAAGTACAGAAGTGATTACTATAACTGAAACGACTGAAATTGCAACGCC
CGGGCAAGACGCAGAAACTACAACGGCTGGATTCGTTGAGCCTCCTATTCCAACTGTTGC
AGATTGCTTGGACAACGAGTACAAGTGCTCATCTGGTTTTAGTTGCATTTCTCAAACCTT
TGTATGCGATGGTGTGCCTGACTGTTTGGACAGCGATGACGAAAACAACTGTGACGATGA
TTTAACTGGCCTTCCCCCAATCCTTACGAACGTAAACACCACCCAAGTAACCATCACCAC
CCCACAAACCACAACCATGGACAAGACAACCATCCCAACCTTGCCTATTACAACCGAATC
TACGTCAGAAATGGTGACGTCATCATCTACTCCGTCTGTGACGTCACCATCTACTCTATC
TATGACGTCATCATTAGCCACGACGGTATCAACTGTAGCAATGACGTCATCTCCCATGCC
AATTACGACCACAACCACGGCGCCAATGATGTCATCAACAGAGCAAATTACGTCATCAAC
ACCAGTAGTGACGTCAACAACTCAACCACCTACGTCATCACATATGGCTATTGAAACGAC
AGGTGCTACAACAATGGATCGCGTCAATGCTACTGTCATATTCAGATCAACAGTATCTCC
TAGCATTACAAGTACAGTTGCGTCAGGTGTATGCGGAGATGATTCTGTTGCTTGTAGTGA
CGGAATATGTATTCCTATTATGTGGTTATGCGATAATGTAGAAGATTGTAACGATGCTGA
AGACGAGTTAGATTGTCCAGACAAAGAATCAACCACATGGCAAGATTACGGTGAATACGC
TACAACAGATTCAACACTGATGATTCCCGAAGCAAGCACAACAGTTTTCACTACTGATGA
AGTGCAAACATCGACTGTTGTTATATCCACAACTCAACCTACTATGCCTACGTCAGAGGC
AACCACGTCACAAGCCACTACTACGTCACAACCAACTACAACTACGTCACATGCATCTAC
TACTACGCCACAAACAACTACAACTACGTCAGATGCAATTACGACTACCTCACAATCAAC
AACGATTGCGTCACAGCCAACTACGTCACAGGCAACTACTACAACTACATCACAACCAAC
TACAACTATGTCAGAGGCAATTACAACTACGTCACAACCACCTACTACGTCAAAAGCAAC
CACTACCACGTCACAAGCAATAACCACAACTACGTCAGAGGCAACTACTACTACGTCACA
ACCTATTATTGCTACGTCAGAACTCGTTACGTTACCACCAGTGACTGAATCCACAACAAC
CAAAATACCAACGACTTCAGAAACAACAACCACCGTGCCAATCCTCATAACAGAAGAACC
CAAGGACAAGCGCTTCACTCCGAGACCAGGAGTTGAAGTCACAGATAGAGCTAACGTGTC
GATGGTTATCGAAACAGATGCGCCAAGCACTGGTAAACGGGGAAGCGCATCCGCAGTTCA
GAGCAAGTCGATGTGGATTTTGATAAACGCTCTGGTCGCTACTTATGTAGTAAAGGTGTT
CTGTAGGTGATGATTTAACTTTCTTTTTATTAAACCTGTAGATTTATATTTGGTTGTAAG
GAGAATTAACGAAATATGAAGCGCTATGTCAGCAAAGCGTTGAACATTGTTTTTAACTTT
GAGTATACCTAACTAAATCTCCTTGTGGCATTAACTTTGAATTTCGCTAATAATTTTAGC
TGTATTTGCGAAAAACAATCGAACTGGTTTATTTACACATTATTTCCCATGTACGTTTAC
GCTTTGAATTTTTTGTGTGTTTTATAGTTTTTTTATTTATACAACGTGGCGTTAATGACA
ATCATTATTTACTGATGTGATACGCCGCGACGTGAGACAACTGTACAATAAAAAATGCAT
TTATTTTATCATC
| Gene3D |
Sperma_CUB_dom_sf (IPR035914) - T[37-169] 1.9E-28 |
| SUPERFAMILY |
Sperma_CUB_dom_sf (IPR035914) - T[45-171] 2.22E-28 |
| Pfam |
CUB_dom (IPR000859) - T[46-167] 5.7E-20 |
| ProSiteProfiles |
CUB_dom (IPR000859) - T[46-171] 22.8 |
| SMART |
CUB_dom (IPR000859) - T[46-171] 8.3E-36 |
| CDD |
CUB_dom (IPR000859) - T[46-168] 1.38573E-29 |
| SMART |
MAM_dom (IPR000998) - T[175-344] 1.5E-33 |
| SUPERFAMILY |
ConA-like_dom_sf (IPR013320) - T[177-342] 9.49E-35 |
| ProSiteProfiles |
MAM_dom (IPR000998) - T[178-344] 30.953 |
| Pfam |
MAM_dom (IPR000998) - T[180-343] 2.4E-35 |
| CDD |
MAM_dom (IPR000998) - T[180-342] 1.89726E-41 |
| SUPERFAMILY |
LDL_receptor-like_sf (IPR036055) - T[383-421] 3.14E-8 - T[572-609] 1.83E-9 |
| SMART |
LDrepeatLR_classA_rpt (IPR002172) - T[385-423] 8.4E-9 - T[574-611] 5.6E-9 |
| Pfam |
LDrepeatLR_classA_rpt (IPR002172) - T[385-421] 3.1E-8 - T[575-609] 8.5E-8 |
| ProSiteProfiles |
LDrepeatLR_classA_rpt (IPR002172) - T[385-422] 12.35 - T[574-610] 12.137 |
| CDD |
LDrepeatLR_classA_rpt (IPR002172) - T[386-421] 3.75316E-11 - T[575-609] 6.05924E-11 |
| PRINTS |
LDrepeatLR_classA_rpt (IPR002172) - T[397-418] 2.3E-9 - T[585-606] 2.3E-9 |
| ProSitePatterns |
LDLR_class-A_CS (IPR023415) - T[399-421] . - T[587-609] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| MDGA2_HUMAN | 32.447 % | 89.7 | 2.81E-18 |
| MDGA1_HUMAN | 37.059 % | 100 | 1.99E-21 |
| MALR1_HUMAN | 25.591 % | 122 | 2.96E-28 |