- Transcript 'Boleac.CG.SB_v3.S18....' >
- Transcript 'KH2012:KH.C14.163.v1...'
Transcript Model
Transcript Id
KH2012:KH.C14.163.v1.A.nonSL2-1
Possible name(s)
COL7A1; PTPRJ; TNN
Gene model
Location
KhC14 [2,908,125 / 2,912,863]
Amino acid sequence
Length: 444
>KH.C14.163.v1.A.nonSL2-1
FTTNMNKLLFPLITILVSVSAQQLPPPTDLAAVARSNAVGITWSPVEGAEKYVATIVSND
MTVDTSETRAAFGGLEPMTTYTASVVAVGVNDSYGVPAFIDFETLAAKPTNLQNVYEETT
ENMLVISWDQVNGTIDHLVEITTTDGGPVDSASISVVDNKAYINGLEKYTFYGLTVRAIT
DGGQMGDQEEFSARTAGKGLKVTAWWVGATTFGGEATIYRDFIIPPGEFHVVVQLTCPVA
EIVVWNANLDMDNSDTSTGMYRIVQDELWMRERPEINFNFNRGNLTDECDLQVGNITVNF
NPPPVAVVADTPQDTPLDITTSSWGVGGMVQINMGVTYINPANPDAGDMGGTLIAKPASG
TFVIVVDSGSACPEGITVTSKWGLTTPVSLQPDPSTPNILYFVQLGNQWFSNSAGFVYTR
NCLDVSGISVSVSENPSLVALAFN
Nucleotide sequence
Length: 1,636
>KH2012:KH.C14.163.v1.A.nonSL2-1
ATTTACTACAAATATGAATAAATTACTTTTCCCACTGATCACCATTTTGGTTTCTGTGTC
CGCACAACAACTGCCACCCCCAACCGACCTTGCAGCTGTAGCAAGATCGAATGCCGTTGG
TATAACATGGTCCCCTGTTGAAGGAGCTGAAAAATACGTGGCAACTATAGTTTCGAACGA
TATGACTGTCGACACTTCGGAAACCAGAGCAGCGTTCGGTGGTCTTGAACCAATGACAAC
TTACACTGCTAGTGTTGTAGCTGTTGGTGTGAACGATTCCTATGGCGTTCCTGCATTCAT
TGACTTTGAGACTTTGGCAGCAAAGCCTACAAACTTGCAAAATGTATACGAGGAGACAAC
GGAAAACATGTTGGTTATATCTTGGGACCAAGTTAATGGAACCATTGACCATTTGGTAGA
AATAACTACAACCGATGGGGGACCAGTTGATTCTGCATCAATCAGCGTGGTCGACAACAA
GGCATACATCAACGGACTTGAGAAATACACTTTCTATGGCCTCACTGTCCGTGCGATCAC
CGACGGAGGGCAGATGGGAGACCAAGAAGAATTCAGTGCAAGAACAGCCGGAAAAGGCTT
GAAAGTCACTGCATGGTGGGTTGGCGCAACTACCTTTGGAGGAGAAGCCACAATCTACAG
AGACTTCATTATTCCTCCTGGAGAATTCCATGTGGTGGTACAACTGACCTGCCCGGTTGC
TGAAATAGTGGTATGGAACGCTAACCTTGATATGGATAACTCCGACACTTCAACCGGTAT
GTACCGCATCGTGCAAGACGAGTTGTGGATGAGAGAACGACCTGAGATCAACTTTAACTT
TAACAGAGGAAACCTTACCGATGAGTGCGACCTGCAGGTAGGAAACATCACCGTTAATTT
CAACCCCCCACCAGTTGCTGTTGTAGCAGACACACCACAAGATACACCACTTGATATAAC
TACGTCGTCTTGGGGAGTCGGCGGTATGGTTCAAATTAACATGGGAGTTACATACATCAA
CCCCGCCAACCCGGATGCCGGTGATATGGGAGGTACTTTGATTGCAAAACCTGCAAGTGG
AACTTTTGTTATCGTCGTCGACAGCGGTTCTGCTTGCCCAGAGGGTATTACTGTCACTTC
CAAATGGGGATTGACCACACCTGTTAGCTTGCAGCCTGATCCCAGCACACCAAACATCTT
GTATTTTGTCCAACTTGGAAACCAGTGGTTCAGTAACAGCGCAGGTTTCGTTTACACCCG
AAACTGTCTTGACGTGAGTGGCATTTCGGTGTCTGTATCTGAAAATCCAAGTTTGGTTGC
TTTGGCTTTCAATTAATTAAACAGTGCTTGTAAATTCGACTAAACAAAAACTTAAACAGA
AATTAAACTTATTTGGAACATTGTACGTAATACATGACATTGGCTTAAAATAGACCAGAC
AGGATGTGAAATGCTGCAGTTATTACTACTTTCTTCATATGTGCAAATGATCTATTCTAA
ATAGCCTAATTCTTAAGCTTTTAGAATCCATTACTTTGATTTTAATCTGGATCATATCGT
AAACTGTCTTAGTTAATGTTAATATATTTATACTAAGAATCGAACTTCGATATTAATAAA
CAACAAATCAAAACTA
| Gene3D |
Ig-like_fold (IPR013783) - T[17-106] 9.1E-9 - T[107-199] 6.7E-9 |
| SMART |
FN3_dom (IPR003961) - T[24-93] 0.0052 - T[106-185] 0.23 |
| ProSiteProfiles |
FN3_dom (IPR003961) - T[26-107] 7.283 - T[108-199] 10.612 |
| SUPERFAMILY |
FN3_sf (IPR036116) - T[29-185] 7.06E-13 |
| CDD |
FN3_dom (IPR003961) - T[108-183] 0.00257863 |
| Pfam |
FN3_dom (IPR003961) - T[116-184] 2.1E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|