Aniseed - Transcript Card

EST 'AV888453' >
Clone 'cidg819e16' >
Clone 'cicl007b14' >
Clone 'cien145631' >
Transcript 'KH2012:KH.C14.120.v2...'

Transcript Model

Transcript Id

KH2012:KH.C14.120.v2.A.nonSL15-1

Possible name(s)

RPS24

Gene model

KH2012:KH.C14.120

Location

KhC14 [1,964,696 / 1,965,831]

Sequences

Amino acid sequence

Length: 126

>KH.C14.120.v2.A.nonSL15-1
IRTRKFMTNRLLQRKQMLVDVLHPGKATVSKTAIREQLAKMYKTTPDVVIAFGFKTQFGG
GKTTGFSLIYDNLDYCKKHEPLHRLVRHKLAEAKKKPSRKQRKERKNRQKKVRGTAKAKV
GSGKKK

Nucleotide sequence

Length: 396

>KH2012:KH.C14.120.v2.A.nonSL15-1
ATTCGCACCAGAAAGTTTATGACAAATCGCTTGCTTCAGAGGAAGCAAATGCTTGTGGAT
GTCTTGCATCCAGGAAAAGCAACTGTGAGCAAAACTGCGATCCGTGAGCAGCTCGCGAAG
ATGTACAAGACCACTCCGGATGTTGTCATCGCTTTTGGGTTCAAGACTCAATTCGGAGGC
GGAAAGACAACCGGCTTCTCTCTTATTTATGACAACCTGGATTACTGCAAGAAGCACGAG
CCACTTCATCGACTTGTTCGTCACAAGCTTGCAGAAGCTAAGAAGAAGCCCTCACGTAAG
CAGAGGAAAGAAAGGAAGAACCGACAAAAGAAGGTGCGAGGCACTGCGAAGGCAAAGGTT
GGAAGTGGAAAGAAGAAGTAAAGTTTTACTGCTTCT

InterProScan

SUPERFAMILY	Ribosomal_L23/L15e_core_dom_sf (IPR012678) - T[1-99] 3.6E-36
PANTHER	Ribosomal_S24e (IPR001976) - T[1-126] 1.6E-64
Hamap	Ribosomal_S24e (IPR001976) - T[2-99] 17.009
ProDom	Ribosomal_S24e (IPR001976) - T[7-78] 4.0E-20
Pfam	Ribosomal_S24e (IPR001976) - T[19-96] 2.0E-38

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
RS24_HUMAN	80.8 %	179	1.31E-59