Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C14.105.v2.A.nonSL5-1

Possible name(s)

CNOT7; CNOT8

Gene model

KH2012:KH.C14.105

Location

KhC14 [518,185 / 521,444]

Sequences

Amino acid sequence

Length: 298

>KH.C14.105.v2.A.nonSL5-1
VYSRRDCIGFYSVIDQAVVAWLCVMPGQTEDPIVEVWANNVESVFKAIRKTVKQYNYVAM
DTEFPGVVARPIGEFRTNSDYQYQLLRCNVDMLKIIQLGLTFMDENGETPPDVSTWQFNF
NEDMYAQDSIDLLNNSGIQFKQHETDGIEPLYFAELLMSSGVVLMENVKWVSFHSGYDFG
YLLKILTNNNLPMDESLFFELLQMFFPTIYDIKYIMKSCKNLKGGLQEVSEQLEVERVGT
QHQAGSDSLLTGMTFFKMREKYFDNEMNIPKFCGHLYGLGSSYIQNGNPYSAEEYNKN

Nucleotide sequence

Length: 1,019

>KH2012:KH.C14.105.v2.A.nonSL5-1
GTGCTTGAGTATATTCTCGGCGAGATTGTATTGGTTTTTACAGCGTAATCGACCAAGCTG
TTGTTGCTTGGTTATGTGTTATGCCTGGACAAACTGAAGACCCGATTGTAGAAGTGTGGG
CAAACAATGTGGAAAGCGTTTTTAAAGCGATCAGGAAGACTGTGAAGCAATACAACTATG
TTGCGATGGACACAGAATTCCCCGGGGTGGTGGCACGCCCTATTGGAGAATTTCGAACCA
ACTCCGATTATCAATATCAGCTTCTGCGCTGTAATGTAGATATGTTAAAAATTATTCAAC
TTGGTTTAACATTTATGGATGAAAATGGTGAAACACCACCAGATGTATCTACTTGGCAGT
TCAACTTTAATGAAGATATGTACGCTCAAGACTCAATTGATTTGCTCAACAATTCTGGAA
TTCAGTTTAAACAACATGAAACGGATGGAATTGAACCTTTGTATTTTGCTGAGTTGTTGA
TGTCATCTGGTGTTGTATTAATGGAAAATGTTAAATGGGTTTCTTTCCACAGTGGTTACG
ACTTTGGATACTTGTTAAAAATATTAACAAACAATAATCTGCCAATGGATGAATCTTTAT
TTTTTGAATTACTACAAATGTTTTTCCCAACAATTTATGATATAAAATACATCATGAAAA
GTTGCAAAAATTTAAAGGGAGGGTTGCAAGAAGTTTCCGAACAATTGGAAGTGGAAAGAG
TTGGAACTCAACATCAAGCTGGGAGCGACAGCCTGCTTACTGGGATGACATTTTTTAAGA
TGAGAGAGAAGTACTTTGACAATGAAATGAATATTCCGAAATTTTGTGGCCATTTATATG
GACTTGGAAGTTCCTACATACAGAATGGGAATCCATACAGTGCTGAAGAATACAACAAGA
ATTAAATTTGAAAATTTCGATTGTTAGATTAAAATGCATTTACTTTAACTTTTCTTTTAT
AGTTTTTGGCAAGTGTTTTAAATACAATGCTAATAAACGCAAAAAAATGTTTAAAAAAA

InterProScan

Gene3D	RNaseH_sf (IPR036397) - T[32-279] 7.4E-114
SUPERFAMILY	RNaseH-like_sf (IPR012337) - T[32-279] 9.49E-90
Pfam	RNase_CAF1 (IPR006941) - T[36-149] 6.7E-11 - T[164-255] 5.9E-9

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
CNOT7_HUMAN	71.479 %	414	3.13E-147
CNOT8_HUMAN	65.385 %	376	5.5E-132