Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C14.105.v2.A.nonSL19-1

Possible name(s)

CNOT7; CNOT8

Gene model

KH2012:KH.C14.105

Location

KhC14 [518,185 / 521,409]

Sequences

Amino acid sequence

Length: 289

>KH.C14.105.v2.A.nonSL19-1
FYSVIDQAVVAWLCVMPGQTEDPIVEVWANNVESVFKAIRKTVKQYNYVAMDTEFPGVVA
RPIGEFRTNSDYQYQLLRCNVDMLKIIQLGLTFMDENGETPPDVSTWQFNFNEDMYAQDS
IDLLNNSGIQFKQHETDGIEPLYFAELLMSSGVVLMENVKWVSFHSGYDFGYLLKILTNN
NLPMDESLFFELLQMFFPTIYDIKYIMKSCKNLKGGLQEVSEQLEVERVGTQHQAGSDSL
LTGMTFFKMREKYFDNEMNIPKFCGHLYGLGSSYIQNGNPYSAEEYNKN

Nucleotide sequence

Length: 984

>KH2012:KH.C14.105.v2.A.nonSL19-1
TTTTACAGCGTAATCGACCAAGCTGTTGTTGCTTGGTTATGTGTTATGCCTGGACAAACT
GAAGACCCGATTGTAGAAGTGTGGGCAAACAATGTGGAAAGCGTTTTTAAAGCGATCAGG
AAGACTGTGAAGCAATACAACTATGTTGCGATGGACACAGAATTCCCCGGGGTGGTGGCA
CGCCCTATTGGAGAATTTCGAACCAACTCCGATTATCAATATCAGCTTCTGCGCTGTAAT
GTAGATATGTTAAAAATTATTCAACTTGGTTTAACATTTATGGATGAAAATGGTGAAACA
CCACCAGATGTATCTACTTGGCAGTTCAACTTTAATGAAGATATGTACGCTCAAGACTCA
ATTGATTTGCTCAACAATTCTGGAATTCAGTTTAAACAACATGAAACGGATGGAATTGAA
CCTTTGTATTTTGCTGAGTTGTTGATGTCATCTGGTGTTGTATTAATGGAAAATGTTAAA
TGGGTTTCTTTCCACAGTGGTTACGACTTTGGATACTTGTTAAAAATATTAACAAACAAT
AATCTGCCAATGGATGAATCTTTATTTTTTGAATTACTACAAATGTTTTTCCCAACAATT
TATGATATAAAATACATCATGAAAAGTTGCAAAAATTTAAAGGGAGGGTTGCAAGAAGTT
TCCGAACAATTGGAAGTGGAAAGAGTTGGAACTCAACATCAAGCTGGGAGCGACAGCCTG
CTTACTGGGATGACATTTTTTAAGATGAGAGAGAAGTACTTTGACAATGAAATGAATATT
CCGAAATTTTGTGGCCATTTATATGGACTTGGAAGTTCCTACATACAGAATGGGAATCCA
TACAGTGCTGAAGAATACAACAAGAATTAAATTTGAAAATTTCGATTGTTAGATTAAAAT
GCATTTACTTTAACTTTTCTTTTATAGTTTTTGGCAAGTGTTTTAAATACAATGCTAATA
AACGCAAAAAAATGTTTAAAAAAA

InterProScan

Gene3D	RNaseH_sf (IPR036397) - T[23-270] 6.6E-114
SUPERFAMILY	RNaseH-like_sf (IPR012337) - T[23-270] 8.22E-90
Pfam	RNase_CAF1 (IPR006941) - T[27-140] 6.1E-11 - T[155-246] 5.5E-9

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
CNOT7_HUMAN	71.479 %	416	6.62E-148
CNOT8_HUMAN	65.385 %	376	2.52E-132