Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C14.105.v2.A.nonSL17-1

Possible name(s)

CNOT7; CNOT8

Gene model

KH2012:KH.C14.105

Location

KhC14 [518,185 / 521,417]

Sequences

Amino acid sequence

Length: 291

>KH.C14.105.v2.A.nonSL17-1
IGFYSVIDQAVVAWLCVMPGQTEDPIVEVWANNVESVFKAIRKTVKQYNYVAMDTEFPGV
VARPIGEFRTNSDYQYQLLRCNVDMLKIIQLGLTFMDENGETPPDVSTWQFNFNEDMYAQ
DSIDLLNNSGIQFKQHETDGIEPLYFAELLMSSGVVLMENVKWVSFHSGYDFGYLLKILT
NNNLPMDESLFFELLQMFFPTIYDIKYIMKSCKNLKGGLQEVSEQLEVERVGTQHQAGSD
SLLTGMTFFKMREKYFDNEMNIPKFCGHLYGLGSSYIQNGNPYSAEEYNKN

Nucleotide sequence

Length: 992

>KH2012:KH.C14.105.v2.A.nonSL17-1
GTATTGGTTTTTACAGCGTAATCGACCAAGCTGTTGTTGCTTGGTTATGTGTTATGCCTG
GACAAACTGAAGACCCGATTGTAGAAGTGTGGGCAAACAATGTGGAAAGCGTTTTTAAAG
CGATCAGGAAGACTGTGAAGCAATACAACTATGTTGCGATGGACACAGAATTCCCCGGGG
TGGTGGCACGCCCTATTGGAGAATTTCGAACCAACTCCGATTATCAATATCAGCTTCTGC
GCTGTAATGTAGATATGTTAAAAATTATTCAACTTGGTTTAACATTTATGGATGAAAATG
GTGAAACACCACCAGATGTATCTACTTGGCAGTTCAACTTTAATGAAGATATGTACGCTC
AAGACTCAATTGATTTGCTCAACAATTCTGGAATTCAGTTTAAACAACATGAAACGGATG
GAATTGAACCTTTGTATTTTGCTGAGTTGTTGATGTCATCTGGTGTTGTATTAATGGAAA
ATGTTAAATGGGTTTCTTTCCACAGTGGTTACGACTTTGGATACTTGTTAAAAATATTAA
CAAACAATAATCTGCCAATGGATGAATCTTTATTTTTTGAATTACTACAAATGTTTTTCC
CAACAATTTATGATATAAAATACATCATGAAAAGTTGCAAAAATTTAAAGGGAGGGTTGC
AAGAAGTTTCCGAACAATTGGAAGTGGAAAGAGTTGGAACTCAACATCAAGCTGGGAGCG
ACAGCCTGCTTACTGGGATGACATTTTTTAAGATGAGAGAGAAGTACTTTGACAATGAAA
TGAATATTCCGAAATTTTGTGGCCATTTATATGGACTTGGAAGTTCCTACATACAGAATG
GGAATCCATACAGTGCTGAAGAATACAACAAGAATTAAATTTGAAAATTTCGATTGTTAG
ATTAAAATGCATTTACTTTAACTTTTCTTTTATAGTTTTTGGCAAGTGTTTTAAATACAA
TGCTAATAAACGCAAAAAAATGTTTAAAAAAA

InterProScan

SUPERFAMILY	RNaseH-like_sf (IPR012337) - T[25-272] 8.86E-90
Gene3D	RNaseH_sf (IPR036397) - T[25-272] 6.8E-114
Pfam	RNase_CAF1 (IPR006941) - T[29-142] 6.2E-11 - T[157-248] 5.5E-9

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
CNOT7_HUMAN	71.479 %	415	1.12E-147
CNOT8_HUMAN	65.385 %	376	2.87E-132