Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C14.105.v2.A.nonSL11-1

Possible name(s)

CNOT7; CNOT8

Gene model

KH2012:KH.C14.105

Location

KhC14 [518,185 / 521,434]

Sequences

Amino acid sequence

Length: 297

>KH.C14.105.v2.A.nonSL11-1
YSRRDCIGFYSVIDQAVVAWLCVMPGQTEDPIVEVWANNVESVFKAIRKTVKQYNYVAMD
TEFPGVVARPIGEFRTNSDYQYQLLRCNVDMLKIIQLGLTFMDENGETPPDVSTWQFNFN
EDMYAQDSIDLLNNSGIQFKQHETDGIEPLYFAELLMSSGVVLMENVKWVSFHSGYDFGY
LLKILTNNNLPMDESLFFELLQMFFPTIYDIKYIMKSCKNLKGGLQEVSEQLEVERVGTQ
HQAGSDSLLTGMTFFKMREKYFDNEMNIPKFCGHLYGLGSSYIQNGNPYSAEEYNKN

Nucleotide sequence

Length: 1,009

>KH2012:KH.C14.105.v2.A.nonSL11-1
ATATTCTCGGCGAGATTGTATTGGTTTTTACAGCGTAATCGACCAAGCTGTTGTTGCTTG
GTTATGTGTTATGCCTGGACAAACTGAAGACCCGATTGTAGAAGTGTGGGCAAACAATGT
GGAAAGCGTTTTTAAAGCGATCAGGAAGACTGTGAAGCAATACAACTATGTTGCGATGGA
CACAGAATTCCCCGGGGTGGTGGCACGCCCTATTGGAGAATTTCGAACCAACTCCGATTA
TCAATATCAGCTTCTGCGCTGTAATGTAGATATGTTAAAAATTATTCAACTTGGTTTAAC
ATTTATGGATGAAAATGGTGAAACACCACCAGATGTATCTACTTGGCAGTTCAACTTTAA
TGAAGATATGTACGCTCAAGACTCAATTGATTTGCTCAACAATTCTGGAATTCAGTTTAA
ACAACATGAAACGGATGGAATTGAACCTTTGTATTTTGCTGAGTTGTTGATGTCATCTGG
TGTTGTATTAATGGAAAATGTTAAATGGGTTTCTTTCCACAGTGGTTACGACTTTGGATA
CTTGTTAAAAATATTAACAAACAATAATCTGCCAATGGATGAATCTTTATTTTTTGAATT
ACTACAAATGTTTTTCCCAACAATTTATGATATAAAATACATCATGAAAAGTTGCAAAAA
TTTAAAGGGAGGGTTGCAAGAAGTTTCCGAACAATTGGAAGTGGAAAGAGTTGGAACTCA
ACATCAAGCTGGGAGCGACAGCCTGCTTACTGGGATGACATTTTTTAAGATGAGAGAGAA
GTACTTTGACAATGAAATGAATATTCCGAAATTTTGTGGCCATTTATATGGACTTGGAAG
TTCCTACATACAGAATGGGAATCCATACAGTGCTGAAGAATACAACAAGAATTAAATTTG
AAAATTTCGATTGTTAGATTAAAATGCATTTACTTTAACTTTTCTTTTATAGTTTTTGGC
AAGTGTTTTAAATACAATGCTAATAAACGCAAAAAAATGTTTAAAAAAA

InterProScan

Gene3D	RNaseH_sf (IPR036397) - T[31-278] 7.3E-114
SUPERFAMILY	RNaseH-like_sf (IPR012337) - T[31-278] 9.49E-90
Pfam	RNase_CAF1 (IPR006941) - T[35-148] 6.5E-11 - T[163-254] 5.8E-9

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
CNOT7_HUMAN	71.479 %	414	2.67E-147
CNOT8_HUMAN	65.385 %	375	6.04E-132