Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C14.105.v2.A.nonSL10-1

Possible name(s)

CNOT7; CNOT8

Gene model

KH2012:KH.C14.105

Location

KhC14 [518,185 / 521,371]

Sequences

Amino acid sequence

Length: 276

>KH.C14.105.v2.A.nonSL10-1
CVMPGQTEDPIVEVWANNVESVFKAIRKTVKQYNYVAMDTEFPGVVARPIGEFRTNSDYQ
YQLLRCNVDMLKIIQLGLTFMDENGETPPDVSTWQFNFNEDMYAQDSIDLLNNSGIQFKQ
HETDGIEPLYFAELLMSSGVVLMENVKWVSFHSGYDFGYLLKILTNNNLPMDESLFFELL
QMFFPTIYDIKYIMKSCKNLKGGLQEVSEQLEVERVGTQHQAGSDSLLTGMTFFKMREKY
FDNEMNIPKFCGHLYGLGSSYIQNGNPYSAEEYNKN

Nucleotide sequence

Length: 946

>KH2012:KH.C14.105.v2.A.nonSL10-1
ATGTGTTATGCCTGGACAAACTGAAGACCCGATTGTAGAAGTGTGGGCAAACAATGTGGA
AAGCGTTTTTAAAGCGATCAGGAAGACTGTGAAGCAATACAACTATGTTGCGATGGACAC
AGAATTCCCCGGGGTGGTGGCACGCCCTATTGGAGAATTTCGAACCAACTCCGATTATCA
ATATCAGCTTCTGCGCTGTAATGTAGATATGTTAAAAATTATTCAACTTGGTTTAACATT
TATGGATGAAAATGGTGAAACACCACCAGATGTATCTACTTGGCAGTTCAACTTTAATGA
AGATATGTACGCTCAAGACTCAATTGATTTGCTCAACAATTCTGGAATTCAGTTTAAACA
ACATGAAACGGATGGAATTGAACCTTTGTATTTTGCTGAGTTGTTGATGTCATCTGGTGT
TGTATTAATGGAAAATGTTAAATGGGTTTCTTTCCACAGTGGTTACGACTTTGGATACTT
GTTAAAAATATTAACAAACAATAATCTGCCAATGGATGAATCTTTATTTTTTGAATTACT
ACAAATGTTTTTCCCAACAATTTATGATATAAAATACATCATGAAAAGTTGCAAAAATTT
AAAGGGAGGGTTGCAAGAAGTTTCCGAACAATTGGAAGTGGAAAGAGTTGGAACTCAACA
TCAAGCTGGGAGCGACAGCCTGCTTACTGGGATGACATTTTTTAAGATGAGAGAGAAGTA
CTTTGACAATGAAATGAATATTCCGAAATTTTGTGGCCATTTATATGGACTTGGAAGTTC
CTACATACAGAATGGGAATCCATACAGTGCTGAAGAATACAACAAGAATTAAATTTGAAA
ATTTCGATTGTTAGATTAAAATGCATTTACTTTAACTTTTCTTTTATAGTTTTTGGCAAG
TGTTTTAAATACAATGCTAATAAACGCAAAAAAATGTTTAAAAAAA

InterProScan

Gene3D	RNaseH_sf (IPR036397) - T[10-257] 5.6E-114
SUPERFAMILY	RNaseH-like_sf (IPR012337) - T[10-257] 6.96E-90
Pfam	RNase_CAF1 (IPR006941) - T[14-127] 5.5E-11 - T[142-233] 5.0E-9

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
CNOT7_HUMAN	71.479 %	415	5.47E-148
CNOT8_HUMAN	65.385 %	376	1.43E-132