- Transcript 'KH2012:KH.C14.100.v1...'
Transcript Model
Transcript Id
KH2012:KH.C14.100.v1.A.ND1-1
Possible name(s)
DRGX; PHOX2A; PHOX2B
Gene model
Location
KhC14 [721,980 / 724,792]
Amino acid sequence
Length: 160
>KH.C14.100.v1.A.ND1-1
GNCQPPMPTAAAYGLNSLRDQSPYSSVPCKFFTETAHQHTGGYGGLHERRKQRRIRTTFT
SSQLKELEKVFAETHYPDIYTREELALKIDLTEARVQVWFQNRRAKWRKMERAKQQPQPI
HSPGSSPSSPNNISSINNSENMISSASPMEDIGKSKRCIV
Nucleotide sequence
Length: 592
>KH2012:KH.C14.100.v1.A.ND1-1
CGGAAACTGCCAGCCACCGATGCCTACAGCGGCCGCGTACGGCCTCAACAGCTTAAGGGA
TCAGTCGCCATATTCTTCAGTACCTTGTAAGTTCTTCACCGAGACGGCCCATCAACACAC
CGGGGGATACGGAGGACTCCACGAAAGGAGGAAGCAACGTCGCATCCGGACTACGTTCAC
AAGCTCCCAGTTAAAAGAGCTTGAAAAAGTTTTCGCCGAAACTCATTACCCGGATATTTA
TACAAGAGAAGAACTTGCGCTAAAAATTGATCTCACTGAAGCCAGAGTGCAGGTTTGGTT
TCAAAATCGTCGAGCAAAATGGCGAAAAATGGAGCGAGCAAAACAACAACCTCAACCCAT
ACATTCTCCTGGGAGTTCCCCTTCTTCTCCCAACAATATCTCGTCCATAAACAACTCGGA
AAATATGATAAGTTCCGCAAGTCCTATGGAAGATATAGGTAAGAGCAAGAGATGTATAGT
TTAATGAATTCATGACGTTATAACACAGGTATTATGTTCCATACACCTCATGCCAGCTTA
TGAGTTACCACGTATGTAAGTTTGTGATTGGTTTTCTTAATGGTTATCTGAC
| SUPERFAMILY |
Homeobox-like_sf (IPR009057) - T[47-117] 2.61E-28 |
| ProSiteProfiles |
Homeobox_dom (IPR001356) - T[50-110] 21.054 |
| SMART |
Homeobox_dom (IPR001356) - T[52-114] 2.0E-28 |
| CDD |
Homeobox_dom (IPR001356) - T[53-111] 2.58948E-24 |
| Pfam |
Homeobox_dom (IPR001356) - T[53-109] 1.1E-24 |
| ProSitePatterns |
Homeobox_CS (IPR017970) - T[85-108] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| DRGX_HUMAN | 56.075 % | 118 | 2.01E-33 |
| PHX2B_HUMAN | 70.642 % | 153 | 1.41E-46 |
| PHX2A_HUMAN | 70.536 % | 152 | 2.43E-46 |