- Transcript 'KH2012:KH.C1.403.v1....'
Transcript Model
Transcript Id
KH2012:KH.C1.403.v1.A.ND1-1
Possible name(s)
HIST1H2BC; HIST1H2BD; HIST1H2BL
Gene model
Location
KhC1 [102,842 / 103,248]
Amino acid sequence
Length: 124
>KH.C1.403.v1.A.ND1-1
QSKMAPTKASSNSKRSTSSGSSGSGGKVKKGHEDFRNYLYKILKEIYHDTGITRQAMDSM
NTLMNYLFHIIAEEASSIMKAANRTTMAANDIQSAVRKVLPGELQKHAVSEGTKAVAKFK
SFYV
Nucleotide sequence
Length: 406
>KH2012:KH.C1.403.v1.A.ND1-1
AGCAAAGCAAAATGGCTCCCACCAAAGCTTCAAGTAATTCTAAACGTTCAACGTCGTCTG
GTTCGTCTGGCAGCGGCGGAAAAGTAAAAAAGGGGCATGAAGATTTTCGCAACTATCTGT
ACAAGATATTGAAAGAAATTTACCATGACACTGGCATCACAAGGCAGGCTATGGACTCCA
TGAACACACTAATGAACTATCTGTTCCATATCATCGCTGAAGAAGCCTCTAGTATTATGA
AAGCAGCAAACAGAACAACAATGGCGGCAAACGACATACAAAGCGCTGTGAGAAAGGTTT
TACCGGGTGAGCTACAAAAACACGCAGTTTCAGAAGGCACAAAAGCGGTTGCAAAATTTA
AAAGTTTTTATGTATAGTGTCAGTGAATAAACACAAAATGACTGTG
| Gene3D |
Histone-fold (IPR009072) - T[1-122] 2.0E-35 |
| SUPERFAMILY |
Histone-fold (IPR009072) - T[9-120] 1.05E-33 |
| Pfam |
Histone_H2A/H2B/H3 (IPR007125) - T[23-98] 4.0E-12 |
| PANTHER |
Histone_H2B (IPR000558) - T[26-121] 1.3E-32 |
| SMART |
Histone_H2B (IPR000558) - T[27-121] 1.5E-29 |
| PRINTS |
Histone_H2B (IPR000558) - T[35-53] 4.2E-25 - T[54-74] 4.2E-25 - T[76-93] 4.2E-25 - T[93-106] 4.2E-25 - T[106-119] 4.2E-25 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| H2B1L_HUMAN | 45.082 % | 100 | 1.72E-28 |
| H2B1N_HUMAN | 45.455 % | 100 | 2.41E-28 |
| H2B1D_HUMAN | 44.628 % | 99.8 | 2.72E-28 |
