- Transcript 'KH2012:KH.C1.401.v1....'
Transcript Model
Transcript Id
KH2012:KH.C1.401.v1.R.ND1-1
Possible name(s)
RNF13; RNF167; ZNRF4
Gene model
Location
KhC1 [8,081,714 / 8,092,371]
Amino acid sequence
Length: 474
>KH.C1.401.v1.R.ND1-1
VSLPYFVPTKSVTIINDLEKINQNTHRPNMETRNFHLFFSIFLSGLSSSHGVVVAYDRFN
ITEQFSDYPAEFGTSVGPDGLDGILMAAEPLDACKPVKERPYPASTFMPNITFNAFALVI
RGGCDFALKVLNAQKAHYNSVIVYNDVSNDIVRMNTNQPDIANQIVIPSVFVGNDAGIIL
SQNYLYNNKNIPIIKITGGESPFSLEYYIIPFVTVLATCIVVLLLFMFVRYLRDRRRQRR
NRLSRRRLKQIPTKQFKKGDEYDVCAICLDDYEEGDTLRILPCQHAYHCKCVDPWLTSSR
RVCPLCKRRVLSDDESSESESEYDSDEERAPLLSQSSPDSSPNSSRRATGFRANPLTFTN
SSASSYMEETDSSDEDHALTPPASLSTLHGTDATFVSHPHPVDRNVSSPAVVMPTDVSSS
PEVRSSLEVYSCISGEDSLASSFRDAHDVLVVQHGIPLFTLLILLLLHVHFFFG
Nucleotide sequence
Length: 2,374
>KH2012:KH.C1.401.v1.R.ND1-1
GTTTCTTTACCATACTTTGTGCCAACAAAATCTGTTACAATTATAAATGACTTGGAAAAG
ATAAATCAAAATACCCATCGACCAAATATGGAGACCAGAAATTTTCATCTTTTCTTCTCA
ATATTTTTGTCTGGATTATCATCAAGTCATGGAGTTGTGGTTGCTTACGATCGTTTCAAC
ATAACCGAACAGTTCAGTGATTACCCTGCAGAGTTTGGGACAAGTGTTGGACCCGATGGA
CTTGATGGCATACTGATGGCAGCTGAACCCCTCGATGCTTGCAAGCCGGTGAAGGAACGT
CCTTACCCTGCTTCAACTTTCATGCCAAACATTACGTTTAATGCATTTGCTCTCGTTATA
AGAGGAGGCTGTGATTTTGCTCTTAAAGTACTAAATGCACAAAAAGCACACTACAACAGC
GTGATTGTATACAATGATGTGTCAAACGATATTGTGCGCATGAATACAAATCAACCTGAT
ATTGCCAATCAAATTGTGATACCATCAGTATTTGTTGGCAATGATGCTGGCATCATTTTG
TCTCAAAACTATCTGTATAACAATAAGAATATTCCAATAATAAAAATAACCGGCGGAGAA
TCTCCTTTTTCTCTCGAATATTACATTATCCCTTTTGTGACCGTTCTCGCAACCTGCATA
GTTGTACTTCTATTATTTATGTTTGTTCGATATCTTCGGGACCGCAGAAGGCAAAGAAGG
AACAGATTGTCGCGAAGACGACTAAAACAAATACCAACAAAGCAATTTAAAAAAGGTGAT
GAATACGATGTTTGCGCAATTTGTCTCGATGATTATGAAGAAGGAGATACACTACGAATA
TTACCTTGCCAACATGCCTACCATTGCAAGTGCGTTGATCCCTGGCTTACAAGCAGCAGG
AGAGTTTGTCCTCTTTGTAAACGAAGAGTGTTGAGCGATGATGAGTCTTCCGAATCGGAA
TCTGAGTATGATTCCGATGAAGAAAGAGCTCCTCTCCTCTCACAAAGTTCTCCTGATTCC
TCTCCCAACTCATCAAGAAGAGCAACTGGGTTTCGTGCGAACCCTCTAACTTTCACAAAC
TCAAGTGCTTCCAGTTACATGGAGGAAACAGACTCTTCAGATGAGGATCATGCCTTGACT
CCTCCTGCATCGTTGTCCACCCTCCATGGAACGGATGCAACATTTGTGAGTCACCCGCAC
CCGGTGGATCGAAACGTCTCCTCCCCTGCAGTTGTGATGCCTACAGATGTTTCCTCTTCA
CCAGAAGTTCGAAGTTCACTTGAAGTTTACAGTTGCATCAGTGGTGAGGATAGTTTGGCA
AGCTCATTCAGGGACGCTCATGATGTTCTGGTAGTGCAACATGGTATACCTCTCTTTACT
CTTTTGATCTTGTTATTGCTACATGTTCACTTCTTTTTTGGTTGATTTCCCTCCTAATTG
TTTTGTTTAAGTGTAATGCTTTTAATGTACATAGTTTTAAATCAATCCCAGCGCCAGTGA
ATCTTGCGACATGACATGTGACTTGAAGTGAATACATGCTTGGCTTAACCATGCATGGAG
TGGCTTCACCATACATGGAATGGTTTCACCATACGTGGTGTGGCTTCATCATGTATGGAA
TGCCTTCACCATGCATAGAGTGGCTTCACCATGCATGAAGTGGCTTCACCATACTTGAAG
TGGCTTCACCATACTTGAAGTGGCTTCACCATACTTGAAGTGGCTTCACCATACTTGAAG
TGGCTTCACCATACGTGGAGTGGCTTTACCATACTTGGCGTGGCTTTACCATGCATGGAG
TGGCTTCACCATTACATGTGTTTTTAAATACAAATTGTCACATCTATTGCAACCATGTTC
TAGTTTCCATTGATTATTTTTTCATTTAAAGTATAATTTATGCGAAATCTTTCTACAATG
TTTTGTATAAGTTATTTTATTCACTCCTACTAACCACATCTAAACTAACCCCACTTTATT
TCTTAACTTATATTTAAAATGTCATTCGAACAAACCAGAATGTTGTAATACCTATATAGT
AGAGTGGGGGAAAACGGTACACCATTTGGTAGTAAAAAAATTACATACAAAGAATTTTAA
AACCGTATCCTCATGACTCCCATAGACCGTTGGTAATTGTTTAAAACACGATCAGGATAT
TTGGATAGTGTCCCGTTTCCCCCCACTCTACTATATATGCTACACTACTCTCTATTCCGC
CCAGGTTACAAAAATTGTCGTTTATTCAATATTACCAACATTTTTTTTATTTTCATACAA
AATGTGCAACTTGCATGCAGCGGTTGCGTTTAGTATGAAACATCGGGCGATTTAGTACGA
AGGTGGTGCAGGATGGTCAACTAACTTTGTATTT
| Pfam |
PA_domain (IPR003137) - T[114-177] 3.7E-6 |
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[242-317] 2.6E-19 |
| SMART |
Znf_RING-CH (IPR011016) - T[264-307] 0.0076 |
| Pfam |
Znf_RING (IPR001841) - T[264-307] 6.5E-13 |
| ProSiteProfiles |
Znf_RING (IPR001841) - T[265-307] 12.77 |
| SMART |
Znf_RING (IPR001841) - T[265-306] 3.9E-8 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RNF13_HUMAN | 39.877 % | 239 | 8.6E-75 |
| RN167_HUMAN | 40 % | 226 | 3.19E-70 |
| ZNRF4_HUMAN | 36.431 % | 164 | 1.57E-45 |