- Transcript 'KH2012:KH.C1.401.v1....'
Transcript Model
Transcript Id
KH2012:KH.C1.401.v1.A.SL2-1
Possible name(s)
RNF13; RNF167; ZNRF4
Gene model
Location
KhC1 [8,081,714 / 8,092,374]
Amino acid sequence
Length: 475
>KH.C1.401.v1.A.SL2-1
KVSLPYFVPTKSVTIINDLEKINQNTHRPNMETRNFHLFFSIFLSGLSSSHGVVVAYDRF
NITEQFSDYPAEFGTSVGPDGLDGILMAAEPLDACKPVKERPYPASTFMPNITFNAFALV
IRGGCDFALKVLNAQKAHYNSVIVYNDVSNDIVRMNTNQPDIANQIVIPSVFVGNDAGII
LSQNYLYNNKNIPIIKITGGESPFSLEYYIIPFVTVLATCIVVLLLFMFVRYLRDRRRQR
RNRLSRRRLKQIPTKQFKKGDEYDVCAICLDDYEEGDTLRILPCQHAYHCKCVDPWLTSS
RRVCPLCKRRVLSDDESSESESEYDSDEERAPLLSQSSPDSSPNSSRRATGFRANPLTFT
NSSASSYMEETDSSDEDHALTPPASLSTLHGTDATFVSHPHPVDRNVSSPAVVMPTDVSS
SPEVRSSLEVYSCISGEDSLASSFRDAHDVLVVQHGIPLFTLLILLLLHVHFFFG
Nucleotide sequence
Length: 2,377
>KH2012:KH.C1.401.v1.A.SL2-1
AAAGTTTCTTTACCATACTTTGTGCCAACAAAATCTGTTACAATTATAAATGACTTGGAA
AAGATAAATCAAAATACCCATCGACCAAATATGGAGACCAGAAATTTTCATCTTTTCTTC
TCAATATTTTTGTCTGGATTATCATCAAGTCATGGAGTTGTGGTTGCTTACGATCGTTTC
AACATAACCGAACAGTTCAGTGATTACCCTGCAGAGTTTGGGACAAGTGTTGGACCCGAT
GGACTTGATGGCATACTGATGGCAGCTGAACCCCTCGATGCTTGCAAGCCGGTGAAGGAA
CGTCCTTACCCTGCTTCAACTTTCATGCCAAACATTACGTTTAATGCATTTGCTCTCGTT
ATAAGAGGAGGCTGTGATTTTGCTCTTAAAGTACTAAATGCACAAAAAGCACACTACAAC
AGCGTGATTGTATACAATGATGTGTCAAACGATATTGTGCGCATGAATACAAATCAACCT
GATATTGCCAATCAAATTGTGATACCATCAGTATTTGTTGGCAATGATGCTGGCATCATT
TTGTCTCAAAACTATCTGTATAACAATAAGAATATTCCAATAATAAAAATAACCGGCGGA
GAATCTCCTTTTTCTCTCGAATATTACATTATCCCTTTTGTGACCGTTCTCGCAACCTGC
ATAGTTGTACTTCTATTATTTATGTTTGTTCGATATCTTCGGGACCGCAGAAGGCAAAGA
AGGAACAGATTGTCGCGAAGACGACTAAAACAAATACCAACAAAGCAATTTAAAAAAGGT
GATGAATACGATGTTTGCGCAATTTGTCTCGATGATTATGAAGAAGGAGATACACTACGA
ATATTACCTTGCCAACATGCCTACCATTGCAAGTGCGTTGATCCCTGGCTTACAAGCAGC
AGGAGAGTTTGTCCTCTTTGTAAACGAAGAGTGTTGAGCGATGATGAGTCTTCCGAATCG
GAATCTGAGTATGATTCCGATGAAGAAAGAGCTCCTCTCCTCTCACAAAGTTCTCCTGAT
TCCTCTCCCAACTCATCAAGAAGAGCAACTGGGTTTCGTGCGAACCCTCTAACTTTCACA
AACTCAAGTGCTTCCAGTTACATGGAGGAAACAGACTCTTCAGATGAGGATCATGCCTTG
ACTCCTCCTGCATCGTTGTCCACCCTCCATGGAACGGATGCAACATTTGTGAGTCACCCG
CACCCGGTGGATCGAAACGTCTCCTCCCCTGCAGTTGTGATGCCTACAGATGTTTCCTCT
TCACCAGAAGTTCGAAGTTCACTTGAAGTTTACAGTTGCATCAGTGGTGAGGATAGTTTG
GCAAGCTCATTCAGGGACGCTCATGATGTTCTGGTAGTGCAACATGGTATACCTCTCTTT
ACTCTTTTGATCTTGTTATTGCTACATGTTCACTTCTTTTTTGGTTGATTTCCCTCCTAA
TTGTTTTGTTTAAGTGTAATGCTTTTAATGTACATAGTTTTAAATCAATCCCAGCGCCAG
TGAATCTTGCGACATGACATGTGACTTGAAGTGAATACATGCTTGGCTTAACCATGCATG
GAGTGGCTTCACCATACATGGAATGGTTTCACCATACGTGGTGTGGCTTCATCATGTATG
GAATGCCTTCACCATGCATAGAGTGGCTTCACCATGCATGAAGTGGCTTCACCATACTTG
AAGTGGCTTCACCATACTTGAAGTGGCTTCACCATACTTGAAGTGGCTTCACCATACTTG
AAGTGGCTTCACCATACGTGGAGTGGCTTTACCATACTTGGCGTGGCTTTACCATGCATG
GAGTGGCTTCACCATTACATGTGTTTTTAAATACAAATTGTCACATCTATTGCAACCATG
TTCTAGTTTCCATTGATTATTTTTTCATTTAAAGTATAATTTATGCGAAATCTTTCTACA
ATGTTTTGTATAAGTTATTTTATTCACTCCTACTAACCACATCTAAACTAACCCCACTTT
ATTTCTTAACTTATATTTAAAATGTCATTCGAACAAACCAGAATGTTGTAATACCTATAT
AGTAGAGTGGGGGAAAACGGTACACCATTTGGTAGTAAAAAAATTACATACAAAGAATTT
TAAAACCGTATCCTCATGACTCCCATAGACCGTTGGTAATTGTTTAAAACACGATCAGGA
TATTTGGATAGTGTCCCGTTTCCCCCCACTCTACTATATATGCTACACTACTCTCTATTC
CGCCCAGGTTACAAAAATTGTCGTTTATTCAATATTACCAACATTTTTTTTATTTTCATA
CAAAATGTGCAACTTGCATGCAGCGGTTGCGTTTAGTATGAAACATCGGGCGATTTAGTA
CGAAGGTGGTGCAGGATGGTCAACTAACTTTGTATTT
| Pfam |
PA_domain (IPR003137) - T[115-178] 3.8E-6 |
| Gene3D |
Znf_RING/FYVE/PHD (IPR013083) - T[243-318] 2.6E-19 |
| Pfam |
Znf_RING (IPR001841) - T[265-308] 6.5E-13 |
| SMART |
Znf_RING-CH (IPR011016) - T[265-308] 0.0076 |
| SMART |
Znf_RING (IPR001841) - T[266-307] 3.9E-8 |
| ProSiteProfiles |
Znf_RING (IPR001841) - T[266-308] 12.77 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| RNF13_HUMAN | 39.877 % | 239 | 9.03E-75 |
| RN167_HUMAN | 40 % | 226 | 3.49E-70 |
| ZNRF4_HUMAN | 36.431 % | 164 | 1.55E-45 |