Aniseed - Transcript Card

Transcript Model

Transcript Id

KH2012:KH.C1.394.v1.A.nonSL7-1

Possible name(s)

LSM12

Gene model

KH2012:KH.C1.394

Location

KhC1 [7,113,739 / 7,118,225]

Sequences

Amino acid sequence

Length: 196

>KH.C1.394.v1.A.nonSL7-1
KKQMQITSMAATAPSNDYFYPGSIVKCTTCHEEVIQGEVITFDHDSKILLLKQPSSCGKS
DLNNVSMLNLDLVKSVTLIKECDAPLPSLTPLSSSKLYQRFNEEVELKTMLAKARDSGVS
TEGINLYLCLKKLLPCTLKEQSILVMDEVLVQPPYLTSDCVAKDAKIPNSQCLDHVRDLV
GRFHKGDKSKLQQGNS

Nucleotide sequence

Length: 1,086

>KH2012:KH.C1.394.v1.A.nonSL7-1
AAGAAACAAATGCAAATAACGAGTATGGCGGCAACTGCTCCGTCTAATGACTACTTCTAC
CCTGGCAGTATTGTGAAATGCACCACCTGCCATGAAGAAGTTATTCAGGGGGAGGTCATC
ACTTTTGATCACGATTCCAAGATTTTGCTTCTAAAGCAACCATCATCATGTGGAAAGTCA
GATCTTAATAATGTTTCTATGTTGAACCTTGACCTAGTAAAGAGCGTGACATTAATCAAG
GAATGCGACGCGCCTTTGCCTTCACTAACTCCACTCAGCTCATCTAAGCTTTACCAGCGT
TTCAATGAAGAGGTGGAGCTTAAGACAATGCTCGCTAAAGCACGAGACTCTGGCGTTTCA
ACTGAGGGGATCAACCTATACTTGTGCCTCAAAAAACTCTTGCCTTGCACTCTGAAAGAA
CAATCAATCCTTGTTATGGATGAAGTTCTGGTTCAGCCTCCATATTTGACTAGTGACTGT
GTGGCTAAAGATGCAAAAATACCTAACAGTCAATGTCTAGACCATGTTCGAGATTTAGTT
GGAAGATTCCATAAAGGCGATAAATCAAAGTTACAACAAGGAAATTCTTAACCATCTTGT
TTATTTATTTTTATTCTTATCGCTTTGTCCTAATGTATCAGTGGACAAAGCTACGTAAAA
GGATTAGTCACAAAACCATATTATCATTACATGTTCCTAAATGTCAACCAATGTTCAAGG
TTAATCAAGATTATCCTTGAAAAAAACAAAACAAAAAAGGTTTTACTTAAAATTCAAGTC
CGCGCGAGACACTTTTAAAAAGTAGAACGCTTATGATTCAAGTTAACGTGAAACAATATG
TTATGTCATGAAATGGTTAGACCGTGCACGCAGTGCATCTCTGTACCATTAAAGGCGTTT
CAAAATATTTTCAAAATAACGTTATTGAAAATGGCCTTTATGGTTTTGGTGCTACGTTTA
CACTAAATATATGGCTTGACTCCTCCAACGTTTGGATCCAAGCAACTATGTGCAAACTTT
TGGCCTTTACTCCAATCTGGTTTAGTTAAAGTTTGCTGTAAAACAATACAACACAGAGCG
ATTGTA

InterProScan

SMART	Anticodon-binding_dom (IPR019181) - T[88-179] 1.1E-8
Pfam	Anticodon-binding_dom (IPR019181) - T[91-177] 3.6E-15

Best Blast Hits in UniProt

Protein Name	Identity	Bit Score	e-value
LSM12_HUMAN	37.778 %	120	1.4E-34