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  1. Transcript 'KH2012:KH.C1.380.v1....'

Transcript Model

Transcript Id

KH2012:KH.C1.380.v1.R.ND1-1

Possible name(s)

CHSY1; CHSY3; CSGALNACT1

Gene model

KH2012:KH.C1.380

Location

KhC1 [5,740,324 / 5,746,021]

Sequences

Amino acid sequence

Length: 838

>KH.C1.380.v1.R.ND1-1
ANQCSRRGGLEKCHSSAMRKRRLVQNTLRLVSGYACGLLLHYFLLSSKPKVCNEIRNDVL
IRGGKRNVVERHSSPVLPQSNIYLGMMSAEKFIDNRVQRALDTWLQKGSWKVEVFADATP
DSLQVPAGLDFNIVTLRSVDDAAYPPQKKCFMMLRHMYDHHIDNYDWFMRVDDDVYMDFP
RLSKLLNTINSSMPVFFGTPGFGMDPDDGIEDGMFYLMGGPGMIFSRGLLLELRAHFSHC
IQHMFSPHEDVEIGRCVWKHAKKAKIPIAWETIEFFYQQYDKNTGAVTNVVMADTTEQRT
AKTVAYHAVKKHDLLYTLHRQVLERRIKKLLNETAKLKREIQAMQTIQNMKEISSLTPYS
KSSPLPYLLGSNTEMTVLSKSRLSHWPITAAWLPQNPMIPRGASTIPAIFWDKYYRHQVD
SVIPARGHQGKEQPTLLKYLSEIENGILKKSCPHLSSNPQFTHGYLWVLPQHGAFISVAH
KGLVKGEYSYCTTHVQVSFAVTLLGEKDHPLSEHPLIAPSLVKRQSLVGYFVGEEIPPAR
KRLHHHSNTMVRYQEPVLPVSFDSSKDRVLFVIPLHGRYRALELFMERYKRDFLNPLKEG
KIANTLSGNVQLVIVLLGARGDEHDMNRASAYLLHSYQQEFGTSLIRYHIADTGKRQFSR
GAGLQLGSLVAGINDIVFFMDIDMIVTPNLVAQCRRNVKHGKQAWYPIPYSQYDPDRHGA
RETIRQTPLTLEEDRGFWRDFGYGIACFYNTDFVSSGGFDLSIEGWGEEDVRLYKAILAS
GVDVFRSKQSDLVHIYHTKHCDQRLVGEQARSCHRTKASHYASQMCLAKTYFQRNNLS

Nucleotide sequence

Length: 2,955

>KH2012:KH.C1.380.v1.R.ND1-1
GCAAACCAATGTAGTAGACGTGGAGGGTTGGAGAAGTGCCACAGCAGTGCGATGAGGAAA
AGAAGATTGGTTCAAAATACACTTCGTTTGGTATCTGGTTATGCCTGTGGACTATTACTT
CACTACTTCTTACTTAGTTCGAAGCCTAAGGTTTGCAACGAAATTCGAAACGACGTGTTA
ATACGTGGCGGCAAACGAAATGTTGTGGAAAGGCATTCGTCGCCTGTTCTGCCTCAATCT
AATATATATTTAGGCATGATGTCAGCAGAAAAATTTATCGACAATCGTGTCCAGAGAGCC
TTGGATACTTGGCTGCAGAAGGGAAGTTGGAAGGTGGAAGTATTTGCTGATGCTACACCC
GATAGTCTGCAAGTACCTGCTGGTCTTGACTTCAATATTGTAACGCTTCGATCAGTGGAT
GACGCAGCCTACCCACCACAGAAGAAATGCTTCATGATGTTACGTCATATGTACGACCAC
CATATTGATAATTATGATTGGTTTATGAGAGTGGACGATGACGTTTACATGGATTTTCCA
CGACTTTCAAAGCTTCTGAACACAATAAACAGCAGCATGCCTGTATTTTTCGGTACGCCT
GGATTTGGAATGGATCCAGATGATGGAATTGAGGATGGAATGTTTTACTTGATGGGTGGT
CCGGGAATGATATTCAGCAGAGGATTACTTCTTGAACTGCGTGCGCATTTCAGTCATTGT
ATTCAACATATGTTTTCACCTCATGAGGATGTAGAGATAGGACGCTGTGTGTGGAAACAC
GCGAAAAAGGCAAAAATCCCAATTGCGTGGGAGACTATTGAATTCTTTTATCAGCAATAT
GATAAAAACACCGGCGCAGTGACTAACGTAGTGATGGCTGACACTACTGAACAAAGGACG
GCCAAAACTGTTGCTTACCATGCTGTGAAAAAACATGATTTGCTATATACTCTGCACAGG
CAGGTTTTGGAAAGAAGAATTAAAAAACTTCTTAATGAAACTGCCAAATTGAAGAGGGAG
ATACAAGCCATGCAAACTATTCAAAATATGAAAGAGATTTCAAGTCTCACGCCATATTCC
AAATCTTCCCCCCTTCCCTACCTACTTGGAAGCAACACGGAAATGACAGTTCTTTCAAAA
TCAAGATTAAGTCACTGGCCAATCACAGCTGCTTGGCTTCCACAGAACCCTATGATACCA
CGGGGTGCTTCAACGATACCAGCAATATTCTGGGACAAATATTACAGACACCAAGTAGAC
TCTGTAATCCCAGCAAGAGGTCATCAAGGTAAAGAGCAACCTACACTTCTTAAATATCTC
AGTGAAATAGAAAATGGGATTTTGAAGAAGTCGTGTCCACACTTGTCTTCCAACCCACAG
TTCACACACGGTTATTTGTGGGTGTTGCCTCAACATGGAGCCTTCATTTCTGTTGCTCAT
AAAGGCTTGGTGAAAGGAGAATATTCGTATTGCACCACGCATGTACAAGTATCATTCGCT
GTCACATTATTGGGGGAGAAAGATCACCCGTTGTCAGAACATCCATTAATTGCACCTTCA
CTTGTTAAACGACAAAGTTTAGTTGGATATTTTGTTGGTGAAGAAATCCCACCAGCCAGG
AAACGATTGCATCATCATTCTAACACCATGGTTCGATATCAAGAACCTGTCCTTCCTGTT
TCATTTGATTCAAGCAAAGACCGTGTTCTGTTTGTTATTCCCTTACATGGAAGATACAGA
GCCCTTGAACTCTTTATGGAGAGGTACAAACGTGACTTTTTAAATCCCTTAAAAGAAGGA
AAAATAGCCAACACACTGTCTGGGAACGTGCAGTTGGTGATTGTATTATTAGGAGCACGA
GGGGATGAACATGATATGAATCGAGCGTCTGCGTATTTATTACATTCCTACCAACAAGAG
TTTGGAACTTCACTGATCAGATACCACATTGCTGATACGGGCAAAAGGCAGTTCTCACGT
GGTGCAGGATTGCAACTTGGTTCACTCGTGGCTGGAATAAATGACATTGTTTTCTTCATG
GACATCGACATGATCGTTACTCCAAACTTAGTTGCTCAATGCAGAAGAAATGTAAAACAC
GGCAAGCAAGCGTGGTACCCTATACCTTACAGTCAATATGATCCCGACCGGCATGGTGCT
CGTGAAACCATCCGACAAACTCCTCTTACTTTAGAGGAGGACCGAGGGTTCTGGAGGGAT
TTCGGGTACGGGATCGCTTGTTTTTACAACACGGACTTCGTTTCAAGTGGAGGTTTTGAT
CTCAGTATTGAAGGGTGGGGGGAGGAAGATGTCAGACTTTACAAAGCAATTCTTGCCTCC
GGTGTGGATGTCTTTAGATCCAAACAGTCTGACCTTGTACACATTTACCACACAAAGCAC
TGTGATCAAAGGTTAGTTGGTGAGCAGGCCAGATCATGTCACCGCACCAAAGCCAGTCAT
TACGCCAGCCAAATGTGTCTTGCCAAAACCTATTTCCAACGTAATAACCTTAGCTGATGT
AATCACAATTAGACATCTAAAACAACAATATACCTCATCGTACTCCATATAGCTACTATA
TTATTTAATGTACTTATTTTTATGATAAAAAGAATTTTGTATTTCAAAAATAATCTATAA
TAACTATACAGCCATATACATACAAGTATATTTAAATTACTCTTACTATTTGTGTCTAAA
GTATTTATTGTCAGTTATTATAACTTTTTATTTATTTTTAGACTTTAATTTATTTTTAAC
CTAATGATGATAATGAAATAATAGAGACTTTGATATAAAAGCCCAGATCACAATCGTGGA
ATATTTGTATTTTGTAAAGCACGAAACAGTAAGTGTTTTCTATTTTATTTAGTTAATGGA
TATTTTCTTCTTGTGCTTTATGTTTTCTAAACCTATTAGCTGTATTATTGGTACTATATT
CAATGAAATAAAGCG

InterProScan

SUPERFAMILY
Nucleotide-diphossugar_trans (IPR029044) - T[161-267] 4.84E-5 - T[549-592] 1.13E-17 - T[653-819] 1.13E-17
Pfam
Chond_GalNAc (IPR008428) - T[236-827] 2.0E-126

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
CHSS3_HUMAN 34.657 % 179 8.74E-47
CHSS1_HUMAN 30.102 % 320 5.2E-97
CGAT1_HUMAN 32.234 % 150 3.0E-38