- Transcript 'KH2012:KH.C1.359.v1....'
Transcript Model
Transcript Id
KH2012:KH.C1.359.v1.A.SL1-1
Possible name(s)
ZFX; ZFY; ZNF836
Gene model
Location
KhC1 [916,399 / 922,781]
Amino acid sequence
Length: 637
>KH.C1.359.v1.A.SL1-1
FIYKQTRMECNESIQELIQISFTCKLCGYGGQVEDDIKQHIKTEHNDNEKVQTANTESTA
KVKEENHVSNQRGNLKRKCKTKNEDFVYYDQKTSKTQQNTNAEITSLEKQQCSKTDSCTE
LASDNLKFSDSMQCQVCKRKFKSDEDLTIHIDSHYGDKFKCVMCDYENKNWTQVKIHMET
HNHPSTNPCNECGETFASSFTLYSHRRYTHMGGEHLCDECGFHAASKYILLQHQLSKHSN
HQCCQFCPYTSDNQRDLLDHIKLRHENGFTCKYCVASVGNPQYKTKEDLNTHCSVAHPGS
KHFFCQQCNYVAKLSHHLRKHMNVHTGAQPYACRYDGCNFRTKDHKNRKQHELTKHKKPG
DLVCRSCSFVTTNQNEWDVHRAMYHMQEFKCDACDFKSNSQASIRRHRLSKHIPEDKMRY
LCSYDGCSYITNLKENLQKHSLTHQEKDQPFMCPICRKTFEIRDNYKNHLQEHHPAVKIY
VCEKCSFSTKNNQGYKRHILRHNATKSFHCKICRYKGRTKQLLQSHMKCRHNNHVPKNES
TSTPEVKPLTSQMYPSSSVHSPQLLGHSLLELQTPPATQVRLQSFPSTPHVTADVTNVAD
VTNVQLNHVTLNTPTTVIIQPGESPMCYGTSPDLLAN
Nucleotide sequence
Length: 2,229
>KH2012:KH.C1.359.v1.A.SL1-1
GATAGAAATGGCAGAAAACCAATACAGTCAGATATTTGGGTTCGTCGTGTAATTTATTTA
TAAACAAACACGAATGGAGTGTAACGAAAGTATACAAGAATTAATTCAAATTTCGTTTAC
TTGTAAACTATGTGGTTATGGTGGCCAAGTGGAAGACGACATTAAACAACACATTAAAAC
GGAACACAATGACAATGAAAAGGTCCAGACAGCGAACACAGAATCCACAGCCAAAGTGAA
AGAGGAGAACCATGTATCAAATCAAAGAGGGAATTTAAAGAGAAAATGTAAAACGAAGAA
TGAAGACTTTGTATATTACGACCAGAAAACAAGCAAAACTCAACAAAACACCAATGCTGA
GATTACCTCATTGGAAAAGCAGCAATGTTCTAAAACAGATTCATGTACTGAGCTTGCTTC
TGATAATTTGAAGTTTTCTGACTCAATGCAATGCCAAGTTTGTAAAAGAAAATTTAAATC
AGATGAGGACCTAACAATACACATAGACTCACATTATGGTGACAAGTTTAAATGTGTGAT
GTGCGATTATGAAAACAAAAATTGGACCCAAGTGAAAATACACATGGAGACTCACAACCA
TCCTTCCACCAACCCTTGTAATGAATGTGGAGAAACATTCGCAAGTTCTTTTACACTTTA
TAGTCATAGGAGATACACACATATGGGTGGCGAGCACTTATGTGATGAATGTGGTTTCCA
TGCAGCGTCTAAATATATTTTACTTCAACATCAGTTATCTAAGCATTCCAATCACCAGTG
TTGCCAGTTCTGTCCATATACCTCAGATAATCAGAGAGATTTATTAGACCACATCAAACT
ACGACATGAGAATGGTTTCACTTGCAAGTATTGCGTGGCTTCAGTGGGGAATCCACAGTA
TAAGACAAAGGAGGATTTGAACACACACTGTAGTGTTGCACATCCTGGTTCTAAACATTT
CTTCTGCCAGCAATGTAATTATGTAGCAAAATTGAGCCACCACTTACGGAAACACATGAA
TGTTCATACAGGAGCTCAACCTTACGCTTGTCGTTATGATGGGTGTAACTTTAGAACTAA
AGACCATAAAAACAGGAAGCAGCATGAGTTAACAAAACATAAGAAACCCGGTGACTTGGT
TTGCCGTTCATGTAGTTTTGTTACAACAAATCAAAATGAGTGGGACGTGCATAGAGCGAT
GTATCATATGCAGGAGTTTAAATGCGACGCTTGTGATTTTAAATCAAATAGTCAAGCTTC
AATACGTCGTCATCGTCTGTCAAAACACATTCCTGAAGATAAAATGAGATATCTATGTTC
GTATGACGGCTGCAGTTACATCACTAATTTAAAAGAGAATTTACAAAAGCATTCCTTAAC
GCACCAGGAGAAAGATCAGCCATTTATGTGCCCTATATGTCGAAAAACTTTTGAAATCCG
AGACAATTATAAAAATCACCTGCAAGAACATCACCCCGCAGTTAAGATATACGTCTGCGA
GAAATGTTCGTTTTCAACCAAGAATAACCAAGGATATAAACGCCACATCCTACGTCACAA
TGCTACTAAAAGTTTCCATTGCAAGATATGCCGTTATAAAGGACGTACGAAACAATTATT
ACAAAGTCACATGAAATGTAGACATAATAATCATGTACCAAAGAATGAATCCACAAGTAC
GCCAGAGGTGAAACCATTAACCTCACAAATGTATCCTTCTAGTTCTGTGCATTCACCCCA
GCTGCTTGGACATTCTTTATTGGAGCTTCAGACACCTCCTGCTACACAAGTTCGTCTGCA
ATCATTCCCTTCAACTCCGCACGTCACTGCTGACGTCACAAACGTTGCTGACGTCACAAA
CGTACAGTTAAACCACGTGACGTTAAACACTCCTACCACTGTGATCATACAGCCAGGGGA
ATCGCCGATGTGCTACGGGACCTCACCCGACTTATTGGCCAATTAACATATAGTGGGATG
GGGGAAGATGGGACACCTTCGGCGCATAATATCCGAATATCCTGATCGTGTTTTAAACAA
TTAACAACGGTCTATGGGAGTCTTGAGCATATAGTTTTATAATTCTTTGAATGTTCCTTG
TTTACTACCACATTGGACGAGAAAATCGAGTTAAAATGTGTCCCAACTTCCCCCACCCTA
CTATATATTGCAACGTTGATATATGCCGTTATTTTATGATGTGAATGAAATAAACGATCT
TGCACTAAA
| SMART |
Znf_C2H2_type (IPR013087) - T[22-45] 0.57 - T[132-154] 0.31 - T[159-181] 0.14 - T[187-210] 0.14 - T[215-238] 3.0 - T[242-265] 0.48 - T[269-297] 32.0 - T[303-325] 0.31 - T[331-356] 0.42 - T[362-385] 9.9 - T[389-412] 0.052 - T[420-444] 0.085 - T[451-473] 0.006 - T[480-502] 0.016 - T[508-531] 0.28 |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[132-181] 1.36E-5 - T[172-221] 5.47E-7 - T[297-345] 1.03E-7 - T[434-486] 6.07E-8 - T[478-528] 1.54E-5 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[132-159] 10.762 - T[187-215] 11.635 - T[303-330] 11.614 - T[451-479] 9.536 - T[508-536] 8.704 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[134-154] . - T[189-210] . - T[453-474] . |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZN836_HUMAN | 26.854 % | 110 | 7.02E-25 |
| ZFY_HUMAN | 25.799 % | 123 | 3.68E-29 |
| ZFX_HUMAN | 25.4 % | 125 | 8.55E-30 |
