- Transcript 'KH2012:KH.C1.359.v1....'
Transcript Model
Transcript Id
KH2012:KH.C1.359.v1.A.nonSL2-1
Possible name(s)
ZFX; ZFY; ZNF836
Gene model
Location
KhC1 [916,399 / 922,667]
Amino acid sequence
Length: 616
>KH.C1.359.v1.A.nonSL2-1
FTCKLCGYGGQVEDDIKQHIKTEHNDNEKVQTANTESTAKVKEENHVSNQRGNLKRKCKT
KNEDFVYYDQKTSKTQQNTNAEITSLEKQQCSKTDSCTELASDNLKFSDSMQCQVCKRKF
KSDEDLTIHIDSHYGDKFKCVMCDYENKNWTQVKIHMETHNHPSTNPCNECGETFASSFT
LYSHRRYTHMGGEHLCDECGFHAASKYILLQHQLSKHSNHQCCQFCPYTSDNQRDLLDHI
KLRHENGFTCKYCVASVGNPQYKTKEDLNTHCSVAHPGSKHFFCQQCNYVAKLSHHLRKH
MNVHTGAQPYACRYDGCNFRTKDHKNRKQHELTKHKKPGDLVCRSCSFVTTNQNEWDVHR
AMYHMQEFKCDACDFKSNSQASIRRHRLSKHIPEDKMRYLCSYDGCSYITNLKENLQKHS
LTHQEKDQPFMCPICRKTFEIRDNYKNHLQEHHPAVKIYVCEKCSFSTKNNQGYKRHILR
HNATKSFHCKICRYKGRTKQLLQSHMKCRHNNHVPKNESTSTPEVKPLTSQMYPSSSVHS
PQLLGHSLLELQTPPATQVRLQSFPSTPHVTADVTNVADVTNVQLNHVTLNTPTTVIIQP
GESPMCYGTSPDLLAN
Nucleotide sequence
Length: 2,115
>KH2012:KH.C1.359.v1.A.nonSL2-1
GTTTACTTGTAAACTATGTGGTTATGGTGGCCAAGTGGAAGACGACATTAAACAACACAT
TAAAACGGAACACAATGACAATGAAAAGGTCCAGACAGCGAACACAGAATCCACAGCCAA
AGTGAAAGAGGAGAACCATGTATCAAATCAAAGAGGGAATTTAAAGAGAAAATGTAAAAC
GAAGAATGAAGACTTTGTATATTACGACCAGAAAACAAGCAAAACTCAACAAAACACCAA
TGCTGAGATTACCTCATTGGAAAAGCAGCAATGTTCTAAAACAGATTCATGTACTGAGCT
TGCTTCTGATAATTTGAAGTTTTCTGACTCAATGCAATGCCAAGTTTGTAAAAGAAAATT
TAAATCAGATGAGGACCTAACAATACACATAGACTCACATTATGGTGACAAGTTTAAATG
TGTGATGTGCGATTATGAAAACAAAAATTGGACCCAAGTGAAAATACACATGGAGACTCA
CAACCATCCTTCCACCAACCCTTGTAATGAATGTGGAGAAACATTCGCAAGTTCTTTTAC
ACTTTATAGTCATAGGAGATACACACATATGGGTGGCGAGCACTTATGTGATGAATGTGG
TTTCCATGCAGCGTCTAAATATATTTTACTTCAACATCAGTTATCTAAGCATTCCAATCA
CCAGTGTTGCCAGTTCTGTCCATATACCTCAGATAATCAGAGAGATTTATTAGACCACAT
CAAACTACGACATGAGAATGGTTTCACTTGCAAGTATTGCGTGGCTTCAGTGGGGAATCC
ACAGTATAAGACAAAGGAGGATTTGAACACACACTGTAGTGTTGCACATCCTGGTTCTAA
ACATTTCTTCTGCCAGCAATGTAATTATGTAGCAAAATTGAGCCACCACTTACGGAAACA
CATGAATGTTCATACAGGAGCTCAACCTTACGCTTGTCGTTATGATGGGTGTAACTTTAG
AACTAAAGACCATAAAAACAGGAAGCAGCATGAGTTAACAAAACATAAGAAACCCGGTGA
CTTGGTTTGCCGTTCATGTAGTTTTGTTACAACAAATCAAAATGAGTGGGACGTGCATAG
AGCGATGTATCATATGCAGGAGTTTAAATGCGACGCTTGTGATTTTAAATCAAATAGTCA
AGCTTCAATACGTCGTCATCGTCTGTCAAAACACATTCCTGAAGATAAAATGAGATATCT
ATGTTCGTATGACGGCTGCAGTTACATCACTAATTTAAAAGAGAATTTACAAAAGCATTC
CTTAACGCACCAGGAGAAAGATCAGCCATTTATGTGCCCTATATGTCGAAAAACTTTTGA
AATCCGAGACAATTATAAAAATCACCTGCAAGAACATCACCCCGCAGTTAAGATATACGT
CTGCGAGAAATGTTCGTTTTCAACCAAGAATAACCAAGGATATAAACGCCACATCCTACG
TCACAATGCTACTAAAAGTTTCCATTGCAAGATATGCCGTTATAAAGGACGTACGAAACA
ATTATTACAAAGTCACATGAAATGTAGACATAATAATCATGTACCAAAGAATGAATCCAC
AAGTACGCCAGAGGTGAAACCATTAACCTCACAAATGTATCCTTCTAGTTCTGTGCATTC
ACCCCAGCTGCTTGGACATTCTTTATTGGAGCTTCAGACACCTCCTGCTACACAAGTTCG
TCTGCAATCATTCCCTTCAACTCCGCACGTCACTGCTGACGTCACAAACGTTGCTGACGT
CACAAACGTACAGTTAAACCACGTGACGTTAAACACTCCTACCACTGTGATCATACAGCC
AGGGGAATCGCCGATGTGCTACGGGACCTCACCCGACTTATTGGCCAATTAACATATAGT
GGGATGGGGGAAGATGGGACACCTTCGGCGCATAATATCCGAATATCCTGATCGTGTTTT
AAACAATTAACAACGGTCTATGGGAGTCTTGAGCATATAGTTTTATAATTCTTTGAATGT
TCCTTGTTTACTACCACATTGGACGAGAAAATCGAGTTAAAATGTGTCCCAACTTCCCCC
ACCCTACTATATATTGCAACGTTGATATATGCCGTTATTTTATGATGTGAATGAAATAAA
CGATCTTGCACTAAA
| SMART |
Znf_C2H2_type (IPR013087) - T[1-24] 0.57 - T[111-133] 0.31 - T[138-160] 0.14 - T[166-189] 0.14 - T[194-217] 3.0 - T[221-244] 0.48 - T[248-276] 32.0 - T[282-304] 0.31 - T[310-335] 0.42 - T[341-364] 9.9 - T[368-391] 0.052 - T[399-423] 0.085 - T[430-452] 0.006 - T[459-481] 0.016 - T[487-510] 0.28 |
| ProSiteProfiles |
Znf_C2H2_type (IPR013087) - T[111-138] 10.762 - T[166-194] 11.635 - T[282-309] 11.614 - T[430-458] 9.536 - T[487-515] 8.704 |
| ProSitePatterns |
Znf_C2H2_type (IPR013087) - T[113-133] . - T[168-189] . - T[432-453] . |
| SUPERFAMILY |
Znf_C2H2_sf (IPR036236) - T[137-186] 3.87E-7 - T[276-324] 1.21E-7 - T[413-465] 5.98E-8 - T[457-507] 1.47E-5 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| ZN836_HUMAN | 26.854 % | 110 | 5.94E-25 |
| ZFY_HUMAN | 25.799 % | 122 | 5.31E-29 |
| ZFX_HUMAN | 25.4 % | 124 | 1.32E-29 |
