- Transcript 'KH2012:KH.C13.36.v3....'
Transcript Model
Transcript Id
KH2012:KH.C13.36.v3.R.ND3-1
Possible name(s)
CLVS1; RLBP1; TTPAL
Gene model
Location
KhC13 [287,000 / 290,286]
Amino acid sequence
Length: 262
>KH.C13.36.v3.R.ND3-1
AKIELGESKGIKEDALQKLRERISATNDDTKRGLLLRKHSEADDSFLLRFLRTRKFDPEK
AYELLQAYDHYHKKYPDVVSPIRKDEVRQRMEMAQPGVLPYRDHEGRVVFLFKIKDWKPE
TYPFWKVVQTYIYLIEHLLKSEETQINGIVIIENFEDYSFRQMAAVGISDYKKMIGMLQG
AFPLRFKGVHFLGQPEFFVKVYALIKKCINSKLLQRVHLHGRTLDAFHKEFPADIIPSDF
GGTAPPYDGHAAANLILGDANE
Nucleotide sequence
Length: 1,250
>KH2012:KH.C13.36.v3.R.ND3-1
GCAAAAATTGAACTGGGCGAATCCAAAGGCATAAAAGAAGACGCCCTACAAAAGTTGCGT
GAAAGAATTTCCGCCACAAATGACGACACAAAACGTGGCTTACTATTACGTAAACACAGC
GAAGCAGACGACAGTTTTCTGTTACGTTTTCTTCGAACACGAAAATTCGATCCAGAAAAA
GCGTACGAGCTTTTGCAAGCATACGACCACTACCACAAGAAATACCCAGACGTGGTAAGC
CCTATTAGAAAAGATGAAGTGAGACAGCGAATGGAAATGGCCCAACCTGGCGTACTACCA
TATCGTGACCATGAGGGCAGAGTCGTTTTCTTATTCAAGATAAAAGATTGGAAACCAGAG
ACTTACCCGTTTTGGAAGGTTGTCCAGACTTATATATATTTGATCGAACATTTATTAAAA
AGCGAGGAGACGCAAATTAACGGTATTGTAATCATTGAAAATTTCGAAGATTATTCTTTC
CGGCAGATGGCGGCAGTGGGTATTTCAGACTATAAGAAAATGATTGGAATGTTACAGGGC
GCTTTCCCGTTGCGTTTTAAAGGAGTTCATTTTCTTGGACAGCCAGAGTTTTTCGTTAAA
GTTTACGCTCTGATAAAGAAATGCATTAACAGCAAGCTGCTTCAACGCGTACATTTGCAC
GGTCGTACTTTAGACGCTTTTCATAAAGAATTCCCAGCCGATATTATACCTTCTGATTTC
GGTGGTACAGCGCCACCATACGATGGCCACGCAGCGGCCAATTTGATCCTAGGTGACGCT
AACGAGTAAGTCACCAAATCCGAGCCACCTGAAAAAGTTTACTATGTTAGGCTTCTGTGA
CCTTACGTGAACTTGTCGCTGACGTCACAATTTATGACGTCATCAAGTTGTGGCGTCAGG
GGAAAAACGTTGGAGTGACACCTGACGTTACACCTATGCAATCTTAAAAATGACGTCATT
AGATTGCGACGTCATCAAAATGTAACGTCATAATAACGTCAGCGTCTAAACGTTTGGGAA
AACGTAAACGACGTTGCGCTACGTTACGCACAGCTACGTTATACTGTACGTGGCGTATAA
TGAATAAACAAGAAATATTGAAACTTAGCTATTTCTTTGTTTTTTTTTAATGTTTTATTT
TAGTTTGTATTTATTTCTGTTCCGTATAATATGCTACATGATCGCCAGTGTTGTAAATAC
ATTTTTGTAAACGCATTTAAGTATATAATAATAAAAAAGCAACATAAAAC
| PANTHER |
RLBP1 (IPR032941) - T[1-261] 8.5E-125 |
| SUPERFAMILY |
CRAL/TRIO_N_dom_sf (IPR036273) - T[4-78] 1.57E-13 |
| Pfam |
CRAL/TRIO_N_dom (IPR011074) - T[16-66] 1.1E-7 |
| SMART |
CRAL/TRIO_N_dom (IPR011074) - T[43-68] 1.2E-10 |
| Gene3D |
CRAL-TRIO_dom_sf (IPR036865) - T[75-255] 2.1E-56 |
| ProSiteProfiles |
CRAL-TRIO_dom (IPR001251) - T[86-248] 15.498 |
| SUPERFAMILY |
CRAL-TRIO_dom_sf (IPR036865) - T[87-249] 2.88E-41 |
| SMART |
CRAL-TRIO_dom (IPR001251) - T[90-245] 2.7E-28 |
| Pfam |
CRAL-TRIO_dom (IPR001251) - T[91-243] 1.9E-29 |
| CDD |
CRAL-TRIO_dom (IPR001251) - T[97-243] 1.45713E-29 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TTPAL_HUMAN | 31.835 % | 155 | 9.81E-46 |
| RLBP1_HUMAN | 42.308 % | 229 | 1.83E-74 |
| CLVS1_HUMAN | 34.615 % | 158 | 1.3E-46 |