- Transcript 'KH2012:KH.C13.36.v2....'
Transcript Model
Transcript Id
KH2012:KH.C13.36.v2.R.ND2-1
Possible name(s)
CLVS1; RLBP1; TTPAL
Gene model
Location
KhC13 [287,000 / 289,855]
Amino acid sequence
Length: 236
>KH.C13.36.v2.R.ND2-1
NDDTKRGLLLRKHSEADDSFLLRFLRTRKFDPEKAYELLQAYDHYHKKYPDVVSPIRKDE
VRQRMEMAQPGVLPYRDHEGRVVFLFKIKDWKPETYPFWKVVQTYIYLIEHLLKSEETQI
NGIVIIENFEDYSFRQMAAVGISDYKKMIGMLQGAFPLRFKGVHFLGQPEFFVKVYALIK
KCINSKLLQRVHLHGRTLDAFHKEFPADIIPSDFGGTAPPYDGHAAANLILGDANE
Nucleotide sequence
Length: 1,173
>KH2012:KH.C13.36.v2.R.ND2-1
AAATGACGACACAAAACGTGGCTTACTATTACGTAAACACAGCGAAGCAGACGACAGTTT
TCTGTTACGTTTTCTTCGAACACGAAAATTCGATCCAGAAAAAGCGTACGAGCTTTTGCA
AGCATACGACCACTACCACAAGAAATACCCAGACGTGGTAAGCCCTATTAGAAAAGATGA
AGTGAGACAGCGAATGGAAATGGCCCAACCTGGCGTACTACCATATCGTGACCATGAGGG
CAGAGTCGTTTTCTTATTCAAGATAAAAGATTGGAAACCAGAGACTTACCCGTTTTGGAA
GGTTGTCCAGACTTATATATATTTGATCGAACATTTATTAAAAAGCGAGGAGACGCAAAT
TAACGGTATTGTAATCATTGAAAATTTCGAAGATTATTCTTTCCGGCAGATGGCGGCAGT
GGGTATTTCAGACTATAAGAAAATGATTGGAATGTTACAGGGCGCTTTCCCGTTGCGTTT
TAAAGGAGTTCATTTTCTTGGACAGCCAGAGTTTTTCGTTAAAGTTTACGCTCTGATAAA
GAAATGCATTAACAGCAAGCTGCTTCAACGCGTACATTTGCACGGTCGTACTTTAGACGC
TTTTCATAAAGAATTCCCAGCCGATATTATACCTTCTGATTTCGGTGGTACAGCGCCACC
ATACGATGGCCACGCAGCGGCCAATTTGATCCTAGGTGACGCTAACGAGTAAGTCACCAA
ATCCGAGCCACCTGAAAAAGTTTACTATGTTAGGCTTCTGTGACCTTACGTGAACTTGTC
GCTGACGTCACAATTTATGACGTCATCAAGTTGTGGCGTCAGGGGAAAAACGTTGGAGTG
ACACCTGACGTTACACCTATGCAATCTTAAAAATGACGTCATTAGATTGCGACGTCATCA
AAATGTAACGTCATAATAACGTCAGCGTCTAAACGTTTGGGAAAACGTAAACGACGTTGC
GCTACGTTACGCACAGCTACGTTATACTGTACGTGGCGTATAATGAATAAACAAGAAATA
TTGAAACTTAGCTATTTCTTTGTTTTTTTTTAATGTTTTATTTTAGTTTGTATTTATTTC
TGTTCCGTATAATATGCTACATGATCGCCAGTGTTGTAAATACATTTTTGTAAACGCATT
TAAGTATATAATAATAAAAAAGCAACATAAAAC
| PANTHER |
RLBP1 (IPR032941) - T[10-235] 8.5E-118 |
| Pfam |
CRAL/TRIO_N_dom (IPR011074) - T[13-40] 3.0E-7 |
| SUPERFAMILY |
CRAL/TRIO_N_dom_sf (IPR036273) - T[15-52] 6.15E-11 |
| SMART |
CRAL/TRIO_N_dom (IPR011074) - T[17-42] 1.2E-10 |
| Gene3D |
CRAL-TRIO_dom_sf (IPR036865) - T[49-229] 1.5E-56 |
| ProSiteProfiles |
CRAL-TRIO_dom (IPR001251) - T[60-222] 15.498 |
| SUPERFAMILY |
CRAL-TRIO_dom_sf (IPR036865) - T[61-223] 2.09E-41 |
| SMART |
CRAL-TRIO_dom (IPR001251) - T[64-219] 2.7E-28 |
| Pfam |
CRAL-TRIO_dom (IPR001251) - T[65-217] 1.4E-29 |
| CDD |
CRAL-TRIO_dom (IPR001251) - T[71-217] 2.15036E-29 |
| Protein Name | Identity | Bit Score | e-value |
|---|---|---|---|
| TTPAL_HUMAN | 34.081 % | 155 | 9.46E-46 |
| RLBP1_HUMAN | 45.872 % | 219 | 7.55E-71 |
| CLVS1_HUMAN | 36.53 % | 152 | 1.23E-44 |