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  1. Transcript 'KH2012:KH.C13.22.v2....'

Transcript Model

Transcript Id

KH2012:KH.C13.22.v2.A.SL3-1

Possible name(s)

SP7; SP8; SP9

Location

KhC13 [1,701,387 / 1,706,122]

Sequences

Amino acid sequence

Length: 409

>KH.C13.22.v2.A.SL3-1
VNIGLDSFILNIKMSAQTSSLLQANPPTGPGSALGGAILAHHHASAFVSKMQHVHATPTD
HPTSPIGGPDSGSPAESICSTTSSPYHVTPPPSSPPVMTYPHSMTSSSSVLGSSVTSRGF
VSNSPYMRSYDPWYPKPVPTDPINPSSSPYVTATSPCPTNVIATSPATSPNYVTTGPTYH
PNPWEAALHSTNTWLEMQSLQHHHNQMAAYTPEYHPTFPASTLTPLATNTSLLTSAAAQH
HSPYETFKPVLPSAAYTDPTSSLPPMLAAPTLPPAPRNSRRYSGRSNCNCPNCQEAERIG
PAAAAFKPKVHSCHIPGCGKVYNKTSHLKAHLRWHTGEKRFACPVCNKRFQRSDHLSKHV
KAHTSNGDTSSNTSSIITSSQQDTGEIVNQKMHVTSARDVKPKIAKLVK

Nucleotide sequence

Length: 1,505

>KH2012:KH.C13.22.v2.A.SL3-1
GTTAATATAGGACTTGATAGTTTTATATTAAATATAAAAATGAGTGCTCAAACGTCGTCT
TTATTGCAAGCCAATCCTCCAACTGGACCTGGATCCGCACTGGGGGGCGCCATATTAGCC
CATCATCACGCCAGTGCATTCGTCAGCAAGATGCAACATGTTCACGCAACTCCAACTGAC
CACCCCACATCTCCTATAGGAGGACCAGATTCCGGTTCGCCTGCTGAGAGTATTTGTTCA
ACTACGTCATCACCATACCACGTGACCCCTCCTCCGTCATCACCACCTGTGATGACGTAT
CCACATTCCATGACGTCATCAAGCTCTGTGCTCGGATCTTCCGTAACGTCACGTGGCTTT
GTTAGCAACAGCCCCTACATGCGATCCTACGACCCCTGGTACCCCAAGCCCGTCCCTACT
GACCCAATTAACCCAAGTTCGTCACCCTACGTCACTGCTACGTCACCCTGCCCCACCAAC
GTCATCGCTACGTCACCAGCTACGTCACCAAACTACGTCACAACAGGACCAACCTACCAC
CCCAACCCATGGGAGGCGGCTTTGCATTCAACAAACACTTGGTTGGAAATGCAATCCTTG
CAACATCATCATAACCAGATGGCCGCTTACACGCCCGAATATCACCCGACCTTCCCCGCA
TCCACTTTAACCCCATTAGCTACAAATACTTCACTTCTTACATCGGCAGCAGCCCAACAT
CATTCCCCCTACGAAACATTTAAACCAGTTCTCCCGAGCGCCGCGTACACAGACCCGACA
TCGAGTCTCCCACCGATGTTGGCGGCACCTACACTGCCCCCAGCCCCGCGGAATTCTCGC
CGATACTCCGGCAGATCCAACTGTAACTGCCCAAACTGCCAGGAAGCTGAGCGCATAGGA
CCAGCAGCCGCCGCATTCAAACCCAAGGTCCACAGTTGTCATATACCTGGCTGTGGGAAA
GTTTACAATAAGACTTCCCATCTTAAAGCCCATCTCAGATGGCATACAGGCGAAAAGAGA
TTCGCTTGCCCGGTTTGCAACAAAAGATTCCAACGAAGCGACCACCTTAGCAAACACGTT
AAAGCACATACCTCCAACGGTGATACGTCATCGAATACGTCATCAATCATAACGTCATCC
CAGCAGGACACAGGAGAGATCGTCAACCAGAAGATGCACGTCACATCCGCTCGTGACGTC
AAACCAAAAATAGCAAAGTTGGTCAAGTGACGTCATCGGAGTGACGTGATGAAATGACGT
CATCAAGGGACGTCATCGAGGATAGAAATCGTATAAAACGTGGTCGAAATTCGAGTCGCG
AAATTTGAAGTTTTCTGAAGAAGGAATGATTGTTACGTCACAATGCTACTATTGTAACCT
CCGCTACACGTAGTTTGCGGCAATGGGCGACCCATTGTTCGCAGCGCTTTCCATATAACC
GCGATTTTGAGAGCATCGCATGTGTGTGTAGCTTCGCTTTAATAAAACGCATCGTCTTCA
ATATA

InterProScan

ProSiteProfiles
Znf_C2H2_type (IPR013087) - T[311-340] 13.297 - T[341-368] 12.383
SMART
Znf_C2H2_type (IPR013087) - T[311-335] 1.5 - T[341-363] 0.0014
ProSitePatterns
Znf_C2H2_type (IPR013087) - T[313-335] . - T[343-363] .
SUPERFAMILY
Znf_C2H2_sf (IPR036236) - T[325-365] 1.66E-12

Best Blast Hits in UniProt
Protein Name Identity Bit Score e-value
SP8_HUMAN 48.039 % 159 7.45E-44
SP9_HUMAN 42.373 % 161 7.15E-45
SP7_HUMAN 67.5 % 124 1.21E-31